SUPERFAMILY 1.75 HMM library and genome assignments server

Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 22 SUPERFAMILY models representing the Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0052011 4077 2008-09-10 d2bmwa2 Reductases
0037504 611 2005-09-08 d1fdra2 Reductases
0048943 2446 2008-09-10 d1qfja2 Reductases
0042754 900 2005-09-08 d1qfza2 Reductases
0038028 921 2005-09-08 d1gawa2 Reductases
0049950 1434 2008-09-10 d1umka2 Reductases
0039466 920 2005-09-08 d1jb9a2 Reductases
0052188 3545 2008-09-10 d2cnda2 Reductases
0047323 3497 2008-09-10 d1i7pa2 Reductases
0041322 1126 2005-09-08 d1ndha2 Reductases
0037677 929 2005-09-08 d1fnca2 Reductases
0034955 724 2005-09-08 d1a8pa2 Reductases
0043660 920 2005-09-08 d1sm4a2 Reductases
0040222 1541 2005-09-08 d1krha2 Aromatic dioxygenase reductase-like
0053272 3357 2008-09-10 d2piaa2 Aromatic dioxygenase reductase-like
0049711 4564 2008-09-10 d1tvca2 Aromatic dioxygenase reductase-like
0046601 2748 2008-09-10 d1ep3b2 Dihydroorotate dehydrogenase B, PyrK subunit
0046686 2336 2008-09-10 d1f20a2 NADPH-cytochrome p450 reductase-like
0035107 972 2005-09-08 d1amoa3 NADPH-cytochrome p450 reductase-like
0036370 731 2005-09-08 d1ddga2 NADPH-cytochrome p450 reductase-like
0038292 887 2005-09-08 d1gvha3 Flavohemoglobin, C-terminal domain
0036119 1259 2005-09-08 d1cqxa3 Flavohemoglobin, C-terminal domain