SUPERFAMILY 1.75 HMM library and genome assignments server

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Nucleotide-diphospho-sugar transferases superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 43 SUPERFAMILY models representing the Nucleotide-diphospho-sugar transferases superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0042758 1599 2005-09-08 d1qg8a_ Spore coat polysaccharide biosynthesis protein SpsA
0046778 3134 2008-09-10 d1fgxa_ beta 1,4 galactosyltransferase (b4GalT1)
0038020 352 2005-09-08 d1ga8a_ Galactosyltransferase LgtC
0038743 1376 2005-09-08 d1hv9a2 UDP-glucose pyrophosphorylase
0047689 154 2008-09-10 d1jv1a_ UDP-glucose pyrophosphorylase
0050249 149 2008-09-10 d1vm8a_ UDP-glucose pyrophosphorylase
0038005 1715 2005-09-08 d1g97a2 UDP-glucose pyrophosphorylase
0053095 2796 2008-09-10 d2icya2 UDP-glucose pyrophosphorylase
0046877 6055 2008-09-10 d1fxoa_ glucose-1-phosphate thymidylyltransferase
0040693 1489 2005-09-08 d1lvwa_ glucose-1-phosphate thymidylyltransferase
0048137 4787 2008-09-10 d1mc3a_ glucose-1-phosphate thymidylyltransferase
0051364 4761 2008-09-10 d1yp2a2 glucose-1-phosphate thymidylyltransferase
0038427 799 2005-09-08 d1h5ra_ glucose-1-phosphate thymidylyltransferase
0047373 4783 2008-09-10 d1iina_ glucose-1-phosphate thymidylyltransferase
0037570 118 2005-09-08 d1fgga_ 1,3-glucuronyltransferase
0044656 118 2005-09-08 d1v82a_ 1,3-glucuronyltransferase
0046466 7601 2008-09-10 d1e5ka_ Molybdenum cofactor biosynthesis protein MobA
0038003 63 2005-09-08 d1g93a_ alpha-1,3-galactosyltransferase-like
0040712 63 2005-09-08 d1lzja_ alpha-1,3-galactosyltransferase-like
0046833 2270 2008-09-10 d1fo8a_ N-acetylglucosaminyltransferase I
0044743 762 2005-09-08 d1vgwa_ Cytidylytransferase
0047707 6293 2008-09-10 d1jyka_ Cytidylytransferase
0050266 4246 2008-09-10 d1vpaa_ Cytidylytransferase
0050178 2263 2008-09-10 d1vh1a_ Cytidylytransferase
0046659 6734 2008-09-10 d1ezia_ Cytidylytransferase
0050387 4324 2008-09-10 d1w77a1 Cytidylytransferase
0038462 838 2005-09-08 d1h7ea_ Cytidylytransferase
0049057 691 2008-09-10 d1qwja_ Cytidylytransferase
0038881 755 2005-09-08 d1i52a_ Cytidylytransferase
0050366 696 2008-09-10 d1w55a1 Cytidylytransferase
0044168 1699 2005-09-08 d1tzfa_ Cytidylytransferase
0050195 5014 2008-09-10 d1vica_ Cytidylytransferase
0047989 1252 2008-09-10 d1ll2a_ Glycogenin
0048604 3567 2008-09-10 d1omza_ Exostosin
0043493 75 2005-09-08 d1s4na_ Glycolipid 2-alpha-mannosyltransferase
0050959 7638 2008-09-10 d1xhba2 Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
0052019 169 2008-09-10 d2bo4a1 MGS-like
0053839 2217 2010-05-31 d2dpwa1 TTHA0179-like
0053791 4226 2010-05-31 d2cu2a2 mannose-1-phosphate guanylyl transferase
0054091 415 2010-05-31 d2i5ea1 MM2497-like
0054718 171 2010-05-31 d2vk9a1 Glycosylating toxin catalytic domain-like
0053760 151 2010-05-31 d2bvla1 Glycosylating toxin catalytic domain-like
0054719 152 2010-05-31 d2vl8a1 Glycosylating toxin catalytic domain-like