SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): ovule primordium

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + + + + + 7:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + + + + 6:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + + + + + 6:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + + + + + 6:   plant anatomical entity [PO:0025131] <3>
+ + + + + 5:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + + + 5:   shoot system [PO:0009006] <18>(516|705) (517|311|98)
+ + + + + 5:   plant axis [PO:0025004] <12>(241|376) (242|173|62)
+ + + + 4:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ + + + 4:   shoot axis [PO:0025029] <25>(198|318) (199|150|55)
+ + + 3:   portion of meristem tissue [PO:0009013] <23>(122|205) (124|96|39)
+ + + 3:   shoot apex [PO:0000037] <6>(161|263) (162|124|46)
+ + 2:   reproductive shoot apex [PO:0025222] <3>(6|4) (6|1|0)
+ + 2:   primordium [PO:0025127] <4>(12|12) (12|3|0)
+ 1:   floral organ primordium [PO:0025477] <10>(1|1) (1|0|0)
0:   ovule primordium [PO:0000018](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DNA-binding pseudobarrel domain0.0000153Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
B3 DNA binding domain0.00001762Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA-binding pseudobarrel domain0.00001193Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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