SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Plant structure DEvelopment stage (PDE): E expanded cotyledon stage

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   plant structure development stage [PO:0009012] <7>
+ + + + 4:   life of whole plant stage [PO:0025337] <2>(317|475) (317|215|77)
+ + + + 4:   whole plant development stage [PO:0007033] <3>(321|479) (321|217|77)
+ + + 3:   sporophyte development stage [PO:0028002] <5>(317|475) (317|215|77)
+ + 2:   sporophyte vegetative stage [PO:0007134] <6>(316|474) (316|215|77)
+ 1:   plant embryo stage [PO:0007631] <7>(263|401) (263|188|71)
0:   E expanded cotyledon stage [PO:0001078](224|354) (226|163|60)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Signal peptide-binding domain0Direct
E2F-DP heterodimerization region0Direct
Cysteine alpha-hairpin motif0Direct
SH3-domain0Direct
RraA-like0Direct
DNA repair protein MutS, domain I0Direct
Lipocalins0Direct
LysM domain0Direct
RBP11-like subunits of RNA polymerase0Direct
Head domain of nucleotide exchange factor GrpE0Direct
TATA-box binding protein-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
Phosphofructokinase0Direct
Amidase signature (AS) enzymes0Direct
BSD domain-like0Direct
Rudiment single hybrid motif0Direct
Ribosomal L11/L12e N-terminal domain0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0Direct
Quinoprotein alcohol dehydrogenase-like0Direct
Cdc48 domain 2-like0Direct
PapD-like0Direct
Ribosomal protein L30p/L7e0Direct
tRNA-binding arm0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
Ribosomal protein L31e0Direct
Phosphoglycerate kinase0Direct
Oxygen-evolving enhancer protein 3,0Direct
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0Direct
lambda repressor-like DNA-binding domains0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
Creatinase/aminopeptidase0Direct
Lesion bypass DNA polymerase (Y-family), little finger domain0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
Carbamate kinase-like0Direct
Putative isomerase YbhE0Direct
YrdC/RibB0Direct
Release factor0Direct
Tautomerase/MIF0Direct
PreATP-grasp domain0Direct
L9 N-domain-like0Direct
Ribosomal protein L10Direct
CHY zinc finger-like0Direct
Transducin (alpha subunit), insertion domain0Direct
Tetrapyrrole methylase0Direct
Ribosomal protein L40Direct
Electron transport accessory proteins0Direct
Endosomal sorting complex assembly domain0Direct
P-domain of calnexin/calreticulin0Direct
Single hybrid motif0Direct
Chelatase0Direct
FKBP-like0Direct
Sec1/munc18-like (SM) proteins0Direct
PLP-binding barrel0Direct
Mitochondrial glycoprotein MAM33-like0Direct
Preprotein translocase SecE subunit0Direct
Homodimeric domain of signal transducing histidine kinase0Direct
Sigma3 and sigma4 domains of RNA polymerase sigma factors0Direct
Cyclophilin-like0Direct
Prokaryotic type I DNA topoisomerase0Direct
Zn-finger domain of Sec23/240Direct
DNA ligase/mRNA capping enzyme, catalytic domain0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
Pentapeptide repeat-like0Direct
Retrovirus zinc finger-like domains0Direct
Chalcone isomerase0Direct
BolA-like0Direct
beta-sandwich domain of Sec23/240Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
Nucleoside diphosphate kinase, NDK0Direct
Ribosomal protein L19 (L19e)0Direct
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain0Direct
EF-G C-terminal domain-like0Direct
RL5-like0Direct
Folate-binding domain0Direct
Peptidyl-tRNA hydrolase-like0Direct
Isochorismatase-like hydrolases0Direct
Expressed protein At2g23090/F21P24.150Direct
FMN-binding split barrel0Direct
Ribosomal protein L39e0Direct
C-terminal autoproteolytic domain of nucleoporin nup980Direct
Ribonuclease PH domain 2-like0Direct
Enolase C-terminal domain-like0Direct
Hypothetical protein YjiA, C-terminal domain0Direct
Metallo-dependent hydrolases0Direct
LuxS/MPP-like metallohydrolase0Direct
Bacterial exopeptidase dimerisation domain0Direct
Cu,Zn superoxide dismutase-like0Direct
Leukotriene A4 hydrolase N-terminal domain0Direct
AMPKBI-like0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
BEACH domain0Direct
Ribosomal protein L130Direct
beta-N-acetylhexosaminidase-like domain0Direct
Macro domain-like0Direct
Phosphoglucomutase, C-terminal domain0Direct
Radical SAM enzymes0Direct
Chorismate mutase II0Direct
Activating enzymes of the ubiquitin-like proteins0Direct
N-terminal domain of the delta subunit of the F1F0-ATP synthase0Direct
Ligand-binding domain in the NO signalling and Golgi transport0Direct
FF domain0Direct
Phosphoglucomutase, first 3 domains0Direct
RNase III domain-like0Direct
GlnB-like0Direct
Peptidyl-tRNA hydrolase II0Direct
LigT-like0Direct
alpha/beta knot0Direct
Chromo domain-like0Direct
L28p-like0Direct
FAH0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
Zinc hairpin stack0Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
Heme oxygenase-like0Direct
Ribosomal protein L10-like0Direct
Diaminopimelate epimerase-like0Direct
WW domain0Direct
Elongation factor TFIIS domain 20Direct
S13-like H2TH domain0Direct
Ribosomal protein S20Direct
Rubredoxin-like0Direct
DNA repair protein MutS, domain II0Direct
ARID-like0Direct
Ribosomal protein L16p/L10e0Direct
ssDNA-binding transcriptional regulator domain0Direct
GroEL-intermediate domain like0Direct
LanC-like0Direct
AlbA-like0Direct
GroEL equatorial domain-like0Direct
GroEL apical domain-like0Direct
PIN domain-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
HIT/MYND zinc finger-like0Direct
S15/NS1 RNA-binding domain0Direct
Flavoproteins0Direct
MOSC N-terminal domain-like0Direct
Supernatant protein factor (SPF), C-terminal domain0Direct
Cytochrome c0Direct
FAD-dependent thiol oxidase0Direct
Nicotinate/Quinolinate PRTase C-terminal domain-like0Direct
Casein kinase II beta subunit0Direct
dsRNA-binding domain-like0Direct
GINS helical bundle-like0Direct
Aconitase iron-sulfur domain0Direct
Enolase N-terminal domain-like0Direct
eIF1-like0Direct
Seven-hairpin glycosidases0Direct
Succinyl-CoA synthetase domains0Direct
RplX-like0Direct
Eukaryotic type KH-domain (KH-domain type I)0Direct
SBT domain0Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
CYTH-like phosphatases0Direct
Ribosomal protein L11, C-terminal domain0Direct
Ribosomal protein S100Direct
AF1104-like0Direct
Glutamine synthetase, N-terminal domain0Direct
Formyltransferase0Direct
post-AAA+ oligomerization domain-like0Direct
R3H domain0Direct
Poly A polymerase C-terminal region-like0Direct
Peptide methionine sulfoxide reductase0Direct
Oxidoreductase molybdopterin-binding domain0Direct
SMR domain-like0Direct
Prokaryotic ribosomal protein L170Direct
MurD-like peptide ligases, catalytic domain0Direct
Creatinase/prolidase N-terminal domain0Direct
DHS-like NAD/FAD-binding domain0Direct
HRDC-like0Direct
YhbY-like0Direct
DNA clamp0Direct
Ribosomal protein S60Direct
Prefoldin0Direct
PAH2 domain0Direct
6-phosphogluconate dehydrogenase C-terminal domain-like0Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
Sec63 N-terminal domain-like0Direct
Magnesium transport protein CorA, transmembrane region0Direct
Rhodanese/Cell cycle control phosphatase0Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
MurD-like peptide ligases, peptide-binding domain0Direct
BAR/IMD domain-like0Direct
Ribulose-phoshate binding barrel0Direct
Peptidase/esterase 'gauge' domain0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
Ribosomal protein L29 (L29p)0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
HIT-like0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
BRCT domain0Direct
Ribosomal protein L140Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
S-adenosylmethionine synthetase0Direct
Smc hinge domain0Direct
ADC-like0Direct
Ribosomal proteins L15p and L18e0Direct
Tim10-like0Direct
Acyl-CoA binding protein0Direct
Helical domain of Sec23/240Direct
Glutamine synthetase/guanido kinase0Direct
PX domain0Direct
Nicotinate/Quinolinate PRTase N-terminal domain-like0Direct
RibA-like0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
NHL repeat0Direct
HesB-like domain0Direct
Ran binding protein zinc finger-like0Direct
Heme-dependent catalase-like0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain0Direct
The spindle assembly checkpoint protein mad20Direct
Dimeric alpha+beta barrel0Direct
Ribosomal L27 protein-like0Direct
XPC-binding domain0Direct
Globin-like0Direct
ClpS-like0Direct
TPR-like0.00004502Direct
RNA-binding domain, RBD0.00004978Direct
WD40 repeat-like0.00022Direct
Nucleic acid-binding proteins0.0003519Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
GroEL-like chaperone, apical domain0Direct
DNA repair glycosylase, 2 C-terminal domains0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
Phosphoglucomutase, C-terminal domain0Direct
FF domain0Direct
IF2B-like0Direct
EF-G/eEF-2 domains III and V0Direct
Clathrin coat assembly domain0Direct
Cyclophilin (peptidylprolyl isomerase)0Direct
GAPDH-like0Direct
Pseudouridine synthase II TruB0Direct
Heme-dependent catalases0Direct
AMPKBI-like0Direct
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain0Direct
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain0Direct
DNase I-like0Direct
Glycerol-3-phosphate dehydrogenase0Direct
Aminoacid dehydrogenases0Direct
NADPH-cytochrome p450 reductase-like0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
DNA polymerase III clamp loader subunits, C-terminal domain0Direct
gamma-carbonic anhydrase-like0Direct
Macro domain0Direct
Hypoxia-inducible factor HIF ihhibitor (FIH1)0Direct
Aminomethyltransferase folate-binding domain0Direct
Sigma4 domain0Direct
PAH2 domain0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain0Direct
Prolyl oligopeptidase, N-terminal domain0Direct
Allosteric chorismate mutase0Direct
Tim10/DDP0Direct
G domain-linked domain0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
Poly A polymerase C-terminal region-like0Direct
Trunk domain of Sec23/240Direct
RWD domain0Direct
CoA-binding domain0Direct
PAPS reductase-like0Direct
Formyltransferase0Direct
(Glycosyl)asparaginase0Direct
RuBisCo LSMT catalytic domain0Direct
Spermidine synthase0Direct
Ribosomal protein L29 (L29p)0Direct
MPP-like0Direct
Hermes transposase-like0Direct
SpoU-like RNA 2'-O ribose methyltransferase0Direct
HIT (HINT, histidine triad) family of protein kinase-interacting proteins0Direct
Leukotriene A4 hydrolase N-terminal domain0Direct
RNA polymerase II subunit RBP4 (RpoF)0Direct
Ribosomal protein L40Direct
Homoserine dehydrogenase-like0Direct
Aldose 1-epimerase (mutarotase)0Direct
Pyruvate oxidase and decarboxylase, middle domain0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
MSP-like0Direct
HAT/Suf repeat0Direct
WW domain0Direct
UDP-glucose pyrophosphorylase0Direct
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Reductases0Direct
E2F dimerization segment0Direct
CHY zinc finger0Direct
Group II chaperonin (CCT, TRIC), apical domain0Direct
FAD-dependent thiol oxidase0Direct
PWWP domain0Direct
Serine acetyltransferase0Direct
Cdc48 domain 2-like0Direct
Rps19E-like0Direct
SBT domain0Direct
beta-Phosphoglucomutase-like0Direct
HspBP1 domain0Direct
S-adenosylmethionine synthetase0Direct
ZZ domain0Direct
Methionine aminopeptidase, insert domain0Direct
HCP-like0Direct
Peptidyl-tRNA hydrolase II0Direct
Glutamine synthetase, N-terminal domain0Direct
Nitrogenase iron protein-like0Direct
28-residue LRR0Direct
C-terminal autoproteolytic domain of nucleoporin nup980Direct
Poly A polymerase head domain-like0Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
PyrH-like0Direct
Transcriptional coactivator PC4 C-terminal domain0Direct
Mitochondrial glycoprotein MAM33-like0Direct
Single-domain sulfurtransferase0Direct
PDI-like0Direct
HesB-like domain0Direct
3-Methyladenine DNA glycosylase I (Tag)0Direct
5' to 3' exonuclease catalytic domain0Direct
La domain0Direct
D-ribose-5-phosphate isomerase (RpiA), catalytic domain0Direct
GAF domain0Direct
Branched-chain alpha-keto acid dehydrogenase Pyr module0Direct
L23p0Direct
Zinc hairpin stack0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Tryptophan biosynthesis enzymes0Direct
Ribosomal proteins L24p and L21e0Direct
Gtf glycosyltransferase0Direct
Starch-binding domain0Direct
Aconitase iron-sulfur domain0Direct
Ferritin0Direct
Myf domain0Direct
FAH0Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0Direct
Plant stress-induced protein0Direct
Ribosomal protein S60Direct
C5 cytosine-specific DNA methylase, DCM0Direct
Ribosomal protein S130Direct
AlkB-like0Direct
Ribosomal protein L18 and S110Direct
Hypothetical protein HI13170Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
Ribosomal protein L30p/L7e0Direct
Release factor0Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
Ribosomal L11/L12e N-terminal domain0Direct
rRNA adenine dimethylase-like0Direct
Pyruvate oxidase and decarboxylase Pyr module0Direct
SH3-domain0Direct
LysM domain0Direct
Glucose 6-phosphate dehydrogenase-like0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
SWIRM domain0Direct
NOL1/NOP2/sun0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
Retrovirus zinc finger-like domains0Direct
RNA-polymerase beta-prime0Direct
Chalcone isomerase0Direct
R3H domain0Direct
Cytidylyltransferase0Direct
HEAT repeat0Direct
Succinyl-CoA synthetase, beta-chain, N-terminal domain0Direct
RraA-like0Direct
Glycerol-3-phosphate transporter0Direct
Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain0Direct
Chromo barrel domain0Direct
B56-like0Direct
Amidase signature (AS) enzymes0Direct
Ribosomal S5 protein, N-terminal domain0Direct
Enolase N-terminal domain-like0Direct
Ribosomal protein S27e0Direct
Ribosomal protein L10e0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
BAR domain0Direct
RibA-like0Direct
DNA polymerase processivity factor0Direct
Cystatins0Direct
BolA-like0Direct
Ribosomal protein S150Direct
RNase III catalytic domain-like0Direct
Diacylglycerol kinase-like0Direct
Rubredoxin0Direct
Transducin (alpha subunit), insertion domain0Direct
Prefoldin0Direct
ATP sulfurylase N-terminal domain0Direct
Glutamine synthetase catalytic domain0Direct
MIF-related0Direct
Ran-binding domain0Direct
DNA repair protein MutS, domain I0Direct
Creatinase/aminopeptidase0Direct
Class-II DAHP synthetase0Direct
beta-N-acetylhexosaminidase catalytic domain0Direct
Peptidyl-tRNA hydrolase-like0Direct
Prokaryotic ribosomal protein L170Direct
Smr domain0Direct
Eps15 homology domain (EH domain)0Direct
Ring hydroxylating alpha subunit ISP domain0Direct
Ribosomal protein L50Direct
Hypothetical protein TM11120Direct
Receiver domain of the ethylene receptor0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
Ribosomal protein L130Direct
4HBT-like0Direct
Casein kinase II beta subunit0Direct
Clp protease, ClpP subunit0Direct
Preprotein translocase SecE subunit0Direct
UBX domain0Direct
Aspartokinase allosteric domain-like0Direct
RNA methyltransferase FtsJ0Direct
Choline kinase0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
Class II glutamine amidotransferases0Direct
Sec1/munc18-like (SM) proteins0Direct
RNB domain-like0Direct
Cu,Zn superoxide dismutase-like0Direct
5' nucleotidase-like0Direct
Ribosomal protein L11, C-terminal domain0Direct
6-phosphogluconate dehydrogenase-like, N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Linker histone H1/H50Direct
MYND zinc finger0Direct
Magnesium transport protein CorA, transmembrane region0Direct
Acyl-ACP thioesterase-like0Direct
HD domain0Direct
alpha-Amylases, C-terminal beta-sheet domain0Direct
Acyl-CoA binding protein0Direct
Ribosomal protein S100Direct
Trehalose-6-phosphate synthase, OtsA0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Ribosomal protein L140Direct
P-domain of calnexin/calreticulin0Direct
ATP-dependent DNA ligase catalytic domain0Direct
Ran binding protein zinc finger-like0Direct
Dihydrodipicolinate reductase-like0Direct
DJ-1/PfpI0Direct
GAT domain0Direct
Neurolysin-like0Direct
Pseudouridine synthase I TruA0Direct
Lesion bypass DNA polymerase (Y-family), catalytic domain0Direct
Enolase0Direct
Elongation factor TFIIS domain 20Direct
LplA-like0Direct
NadC N-terminal domain-like0Direct
RNase Z-like0Direct
The spindle assembly checkpoint protein mad20Direct
PX domain0Direct
Adenosine-5'phosphosulfate kinase (APS kinase)0Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
AMPK-beta glycogen binding domain-like0Direct
Tail specific protease, catalytic domain0Direct
NifU C-terminal domain-like0Direct
Glyoxalase I (lactoylglutathione lyase)0Direct
Homodimeric domain of signal transducing histidine kinase0Direct
Folylpolyglutamate synthetase0Direct
Sec63 C-terminal domain-like0Direct
RelA/SpoT domain0Direct
GroES0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
Deoxycytidylate deaminase-like0Direct
Class I alpha-1;2-mannosidase, catalytic domain0Direct
Smc hinge domain0Direct
PNP-oxidase like0Direct
Succinyl-CoA synthetase domains0Direct
Cdc48 N-terminal domain-like0Direct
monodomain cytochrome c0Direct
Peptide methionine sulfoxide reductase0Direct
GroEL-like chaperone, intermediate domain0Direct
Ribosomal proteins L15p and L18e0Direct
Ribosomal protein L190Direct
LEA14-like0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0Direct
BEACH domain0Direct
Cytochrome b50Direct
AF1104-like0Direct
Zn-finger domain of Sec23/240Direct
Cytochrome p450 reductase N-terminal domain-like0Direct
ARID domain0Direct
N-type ATP pyrophosphatases0Direct
IPP isomerase-like0Direct
BSD domain0Direct
Prolyl oligopeptidase, C-terminal domain0Direct
Thioredoxin-like 2Fe-2S ferredoxin0Direct
Thiolase-related0Direct
Shikimate kinase (AroK)0Direct
Signal peptide-binding domain0Direct
Ribosomal protein L10Direct
D-ribulose-5-phosphate 3-epimerase0Direct
Plus30Direct
NadC C-terminal domain-like0Direct
Pyruvate oxidase and decarboxylase PP module0Direct
Nucleoside diphosphate kinase, NDK0Direct
2Fe-2S ferredoxin-related0Direct
Sedlin (SEDL)0Direct
Chromo domain0Direct
Histidine kinase0Direct
Head domain of nucleotide exchange factor GrpE0Direct
Ribosomal protein L30Direct
VHS domain0Direct
Plant transcriptional regulator PBF-20Direct
Ribosomal protein L10-like0Direct
Ribosomal protein L19 (L19e)0Direct
Bacterial exopeptidase dimerisation domain0Direct
Poly(ADP-ribose) polymerase, C-terminal domain0Direct
Phosphofructokinase0Direct
NHL repeat0Direct
CAT-like0Direct
Ribosomal protein L39e0Direct
Ribonuclease PH domain 2-like0Direct
Molybdenum-containing oxidoreductases-like dimerisation domain0Direct
FucT-like0Direct
Calnexin/calreticulin0Direct
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain0Direct
Pyridoxal-dependent decarboxylase0Direct
MutT-like0Direct
WrbA-like0Direct
GDI-like N domain0Direct
Eukaryotic type KH-domain (KH-domain type I)0Direct
GroEL chaperone, ATPase domain0Direct
Hypothetical protein At2g341600Direct
Hypothetical protein YjiA, C-terminal domain0Direct
BphP N-terminal domain-like0Direct
BC ATP-binding domain-like0Direct
Isochorismatase-like hydrolases0Direct
NLI interacting factor-like phosphatase0Direct
eIF1-like0Direct
Biotinyl/lipoyl-carrier proteins and domains0Direct
Translational machinery components0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
PhzC/PhzF-like0Direct
Methyl-CpG-binding domain, MBD0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
Prokaryotic type I DNA topoisomerase0Direct
ATP sulfurylase catalytic domain0Direct
Cell cycle arrest protein BUB30Direct
PUA domain0Direct
PCI domain (PINT motif)0Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
BC N-terminal domain-like0Direct
N-acetyl-l-glutamate kinase0Direct
Phytochrome-specific domain0Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
Biotin dependent carboxylase carboxyltransferase domain0Direct
Ribosomal protein L37e0Direct
EDF1-like0Direct
YhbY-like0Direct
RplX-like0Direct
Ribosomal protein S20Direct
Glyoxalase II (hydroxyacylglutathione hydrolase)0Direct
TRM1-like0Direct
Pentapeptide repeats0Direct
Tetrapyrrole methylase0Direct
Cofactor-dependent phosphoglycerate mutase0Direct
FKBP immunophilin/proline isomerase0Direct
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain0Direct
XPC-binding domain0Direct
Double-stranded RNA-binding domain (dsRBD)0Direct
Phosphoglucomutase, first 3 domains0Direct
BC C-terminal domain-like0Direct
Ubiquitin activating enzymes (UBA)0Direct
beta-sandwich domain of Sec23/240Direct
Phosphoglycerate kinase0Direct
Oxygen-evolving enhancer protein 3,0Direct
DNA ligase/mRNA capping enzyme postcatalytic domain0Direct
Helical domain of Sec23/240Direct
Molybdenum cofactor biosynthesis protein MoeB0Direct
Ribosomal protein L31e0Direct
NADPH-cytochrome p450 reductase FAD-binding domain-like0Direct
Leukotriene A4 hydrolase catalytic domain0Direct
ATP-dependent protease Lon (La), catalytic domain0Direct
Protein prenyltransferases0Direct
RNA-polymerase beta0Direct
Sec63 N-terminal domain0Direct
Ribosomal protein L7/12, C-terminal domain0Direct
YicI N-terminal domain-like0Direct
Canonical RBD0.000002108Direct
Tandem AAA-ATPase domain0.0004592Direct
Cold shock DNA-binding domain-like0.0006411Direct
PHD domain0.0009562Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FAH0Direct
Creatinase/aminopeptidase0Direct
Peptide methionine sulfoxide reductase0Direct
Ribosomal L27 protein-like0Direct
Ribosomal protein L130Direct
6-phosphogluconate dehydrogenase C-terminal domain-like0Direct
Ribosomal protein L16p/L10e0Direct
BolA-like0Direct
DNA ligase/mRNA capping enzyme, catalytic domain0Direct
PX domain0Direct
Nicotinate/Quinolinate PRTase C-terminal domain-like0Direct
AF1104-like0Direct
Lipocalins0Direct
Composite domain of metallo-dependent hydrolases0Direct
Electron transport accessory proteins0Direct
PreATP-grasp domain0Direct
Preprotein translocase SecE subunit0Direct
Metallo-dependent hydrolases0Direct
Zinc hairpin stack0Direct
Eukaryotic type KH-domain (KH-domain type I)0Direct
AlbA-like0Direct
Expressed protein At2g23090/F21P24.150Direct
Mitochondrial glycoprotein MAM33-like0Direct
Acyl-CoA binding protein0Direct
Glutamine synthetase/guanido kinase0Direct
Radical SAM enzymes0Direct
Bacterial exopeptidase dimerisation domain0Direct
PAH2 domain0Direct
Rudiment single hybrid motif0Direct
FF domain0Direct
Tautomerase/MIF0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
eIF1-like0Direct
Isochorismatase-like hydrolases0Direct
FKBP-like0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
Ribosomal protein S60Direct
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0Direct
Ribosomal protein L30p/L7e0Direct
Diaminopimelate epimerase-like0Direct
RplX-like0Direct
WW domain0Direct
Smc hinge domain0Direct
Ribonuclease PH domain 2-like0Direct
Heme oxygenase-like0Direct
Enolase C-terminal domain-like0Direct
Elongation factor TFIIS domain 20Direct
Cryptochrome/photolyase, N-terminal domain0Direct
E2F-DP heterodimerization region0Direct
Magnesium transport protein CorA, transmembrane region0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
YhbY-like0Direct
LuxS/MPP-like metallohydrolase0Direct
lambda repressor-like DNA-binding domains0Direct
Ribosomal protein S20Direct
dsRNA-binding domain-like0Direct
Peptidase/esterase 'gauge' domain0Direct
Quinoprotein alcohol dehydrogenase-like0Direct
RBP11-like subunits of RNA polymerase0Direct
beta-sandwich domain of Sec23/240Direct
Seven-hairpin glycosidases0Direct
Oxygen-evolving enhancer protein 3,0Direct
Nicotinate/Quinolinate PRTase N-terminal domain-like0Direct
Ribosomal protein L40Direct
Chalcone isomerase0Direct
Prokaryotic ribosomal protein L170Direct
GroEL equatorial domain-like0Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
Ribosomal protein S100Direct
TATA-box binding protein-like0Direct
Sec1/munc18-like (SM) proteins0Direct
Cysteine alpha-hairpin motif0Direct
alpha/beta knot0Direct
L28p-like0Direct
BEACH domain0Direct
Ribosomal protein L140Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
Lesion bypass DNA polymerase (Y-family), little finger domain0Direct
Chorismate mutase II0Direct
R3H domain0Direct
Phosphoglycerate kinase0Direct
Tim10-like0Direct
Casein kinase II beta subunit0Direct
Chromo domain-like0Direct
Nucleoside diphosphate kinase, NDK0Direct
beta-N-acetylhexosaminidase-like domain0Direct
XPC-binding domain0Direct
GroEL-intermediate domain like0Direct
Supernatant protein factor (SPF), C-terminal domain0Direct
Cu,Zn superoxide dismutase-like0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Phosphoglucomutase, C-terminal domain0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
SBT domain0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
EF-G C-terminal domain-like0Direct
Poly A polymerase C-terminal region-like0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
Tetrapyrrole methylase0Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
Rhodanese/Cell cycle control phosphatase0Direct
Peptidyl-tRNA hydrolase-like0Direct
N-terminal domain of the delta subunit of the F1F0-ATP synthase0Direct
S-adenosylmethionine synthetase0Direct
post-AAA+ oligomerization domain-like0Direct
Succinyl-CoA synthetase domains0Direct
HIT-like0Direct
RibA-like0Direct
NHL repeat0Direct
Hypothetical protein YjiA, C-terminal domain0Direct
DNA repair protein MutS, domain I0Direct
S15/NS1 RNA-binding domain0Direct
ARID-like0Direct
Cyclophilin-like0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
Cytochrome c0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
DNA repair protein MutS, domain II0Direct
YrdC/RibB0Direct
L9 N-domain-like0Direct
Helical domain of Sec23/240Direct
CYTH-like phosphatases0Direct
PapD-like0Direct
Sigma3 and sigma4 domains of RNA polymerase sigma factors0Direct
Ribosomal protein L10Direct
HIT/MYND zinc finger-like0Direct
Macro domain-like0Direct
Retrovirus zinc finger-like domains0Direct
Folate-binding domain0Direct
C-terminal autoproteolytic domain of nucleoporin nup980Direct
Cryptochrome/photolyase FAD-binding domain0Direct
MurD-like peptide ligases, catalytic domain0Direct
PIN domain-like0Direct
Carbamate kinase-like0Direct
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain0Direct
Sec63 N-terminal domain-like0Direct
Transducin (alpha subunit), insertion domain0Direct
RL5-like0Direct
HRDC-like0Direct
Ribosomal protein L10-like0Direct
Ribulose-phoshate binding barrel0Direct
Enolase N-terminal domain-like0Direct
FMN-binding split barrel0Direct
Ribosomal protein L11, C-terminal domain0Direct
Ribosomal protein L31e0Direct
SMR domain-like0Direct
GINS helical bundle-like0Direct
Single hybrid motif0Direct
Ribosomal protein L19 (L19e)0Direct
Zn-finger domain of Sec23/240Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Heme-dependent catalase-like0Direct
Prokaryotic type I DNA topoisomerase0Direct
GroEL apical domain-like0Direct
FAD-dependent thiol oxidase0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
GlnB-like0Direct
MurD-like peptide ligases, peptide-binding domain0Direct
ADC-like0Direct
Dimeric alpha+beta barrel0Direct
Chelatase0Direct
Pentapeptide repeat-like0Direct
BSD domain-like0Direct
Glutamine synthetase, N-terminal domain0Direct
LysM domain0Direct
HesB-like domain0Direct
Phosphoglucomutase, first 3 domains0Direct
Homodimeric domain of signal transducing histidine kinase0Direct
Activating enzymes of the ubiquitin-like proteins0Direct
Amidase signature (AS) enzymes0Direct
The spindle assembly checkpoint protein mad20Direct
DHS-like NAD/FAD-binding domain0Direct
Putative isomerase YbhE0Direct
Ligand-binding domain in the NO signalling and Golgi transport0Direct
Phosphofructokinase0Direct
ClpS-like0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
Ribosomal L11/L12e N-terminal domain0Direct
Head domain of nucleotide exchange factor GrpE0Direct
CHY zinc finger-like0Direct
Leukotriene A4 hydrolase N-terminal domain0Direct
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain0Direct
Ribosomal proteins L15p and L18e0Direct
Formyltransferase0Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
AMPKBI-like0Direct
ssDNA-binding transcriptional regulator domain0Direct
DNA clamp0Direct
Aconitase iron-sulfur domain0Direct
RNase III domain-like0Direct
S13-like H2TH domain0Direct
Endosomal sorting complex assembly domain0Direct
Cdc48 domain 2-like0Direct
Release factor0Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
Flavoproteins0Direct
Ribosomal protein L39e0Direct
Globin-like0Direct
Creatinase/prolidase N-terminal domain0Direct
P-domain of calnexin/calreticulin0Direct
Rubredoxin-like0Direct
BAR/IMD domain-like0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Prefoldin0Direct
tRNA-binding arm0Direct
PLP-binding barrel0Direct
MOSC N-terminal domain-like0Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
SH3-domain0Direct
Ribosomal protein L29 (L29p)0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
Peptidyl-tRNA hydrolase II0Direct
Signal peptide-binding domain0Direct
BRCT domain0Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
Ran binding protein zinc finger-like0Direct
LigT-like0Direct
LanC-like0Direct
RraA-like0Direct
TPR-like0.00003793Direct
RNA-binding domain, RBD0.00004196Direct
WD40 repeat-like0.0001857Direct
Nucleic acid-binding proteins0.0002975Direct
ARM repeat0.0008816Direct
Nucleotidylyl transferase0.0009352Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57863,48403
  • 57863 - ArfGap/RecO-like zinc finger
  • 48403 - Ankyrin repeat
  • 0Direct
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0Direct
    161219,161245
  • 161219 - CHY zinc finger-like
  • 161245 - Zinc hairpin stack
  • 0Direct
    46785,158702
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 0Direct
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0Direct
    88659,88659
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 0Direct
    158702,81296
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
  • 0Direct
    54534,48452
  • 54534 - FKBP-like
  • 48452 - TPR-like
  • 0Direct
    57850,46689
  • 57850 - RING/U-box
  • 46689 - Homeodomain-like
  • 0Direct
    51735,48179
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 0Direct
    52440,56059
  • 52440 - PreATP-grasp domain
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 0Direct
    56235,53271
  • 56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
  • 53271 - PRTase-like
  • 0Direct
    110324,50249
  • 110324 - Ribosomal L27 protein-like
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    47762,47762
  • 47762 - PAH2 domain
  • 47762 - PAH2 domain
  • 0Direct
    54211,55666
  • 54211 - Ribosomal protein S5 domain 2-like
  • 55666 - Ribonuclease PH domain 2-like
  • 0Direct
    56524,81296
  • 56524 - Oxidoreductase molybdopterin-binding domain
  • 81296 - E set domains
  • 0Direct
    48452,81901
  • 48452 - TPR-like
  • 81901 - HCP-like
  • 0Direct
    56235,52402
  • 56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
  • 52402 - Adenine nucleotide alpha hydrolases-like
  • 0Direct
    57850,49599
  • 57850 - RING/U-box
  • 49599 - TRAF domain-like
  • 0Direct
    54768,54768
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 0Direct
    56091,50249
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    100950,75445
  • 100950 - NagB/RpiA/CoA transferase-like
  • 75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain
  • 0Direct
    51338,51556
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    52540,54211
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0Direct
    54368,55931
  • 54368 - Glutamine synthetase, N-terminal domain
  • 55931 - Glutamine synthetase/guanido kinase
  • 0Direct
    53383,53383
  • 53383 - PLP-dependent transferases
  • 53383 - PLP-dependent transferases
  • 0Direct
    52047,52047
  • 52047 - RNI-like
  • 52047 - RNI-like
  • 0Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0Direct
    52540,48403
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
  • 0Direct
    81383,54518
  • 81383 - F-box domain
  • 54518 - Tubby C-terminal domain-like
  • 0Direct
    158702,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54826,51604
  • 54826 - Enolase N-terminal domain-like
  • 51604 - Enolase C-terminal domain-like
  • 0Direct
    56059,51246
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 51246 - Rudiment single hybrid motif
  • 0Direct
    50022,55961
  • 50022 - ISP domain
  • 55961 - Bet v1-like
  • 0Direct
    81995,82919
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 0Direct
    47661,58038
  • 47661 - t-snare proteins
  • 58038 - SNARE fusion complex
  • 0Direct
    101908,56219
  • 101908 - Putative isomerase YbhE
  • 56219 - DNase I-like
  • 0Direct
    88798,50249
  • 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    81901,48452
  • 81901 - HCP-like
  • 48452 - TPR-like
  • 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0Direct
    103481,103481
  • 103481 - Multidrug resistance efflux transporter EmrE
  • 103481 - Multidrug resistance efflux transporter EmrE
  • 0Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0Direct
    50447,54980
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    48179,52413
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
  • 0Direct
    56112,48371
  • 56112 - Protein kinase-like (PK-like)
  • 48371 - ARM repeat
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    55781,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    69065,54768
  • 69065 - RNase III domain-like
  • 54768 - dsRNA-binding domain-like
  • 0Direct
    54637,54637
  • 54637 - Thioesterase/thiol ester dehydrase-isomerase
  • 54637 - Thioesterase/thiol ester dehydrase-isomerase
  • 0Direct
    158639,63748
  • 158639 - ENT-like
  • 63748 - Tudor/PWWP/MBT
  • 0Direct
    50729,81837
  • 50729 - PH domain-like
  • 81837 - BEACH domain
  • 0Direct
    82199,81822
  • 82199 - SET domain
  • 81822 - RuBisCo LSMT C-terminal, substrate-binding domain
  • 0Direct
    47364,52540
  • 47364 - Domain of the SRP/SRP receptor G-proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    47473,52540
  • 47473 - EF-hand
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    161245,57850
  • 161245 - Zinc hairpin stack
  • 57850 - RING/U-box
  • 0Direct
    51735,55347
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52025,57850
  • 52025 - PA domain
  • 57850 - RING/U-box
  • 0Direct
    52467,52518
  • 52467 - DHS-like NAD/FAD-binding domain
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0Direct
    46565,57938
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 0Direct
    82185,82185
  • 82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
  • 82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
  • 0Direct
    52540,52058
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52058 - L domain-like
  • 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    55785,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
  • 0Direct
    103657,50729
  • 103657 - BAR/IMD domain-like
  • 50729 - PH domain-like
  • 0Direct
    88697,52374
  • 88697 - PUA domain-like
  • 52374 - Nucleotidylyl transferase
  • 0Direct
    50729,57863
  • 50729 - PH domain-like
  • 57863 - ArfGap/RecO-like zinc finger
  • 0Direct
    50993,53474
  • 50993 - Peptidase/esterase 'gauge' domain
  • 53474 - alpha/beta-Hydrolases
  • 0Direct
    52402,52833
  • 52402 - Adenine nucleotide alpha hydrolases-like
  • 52833 - Thioredoxin-like
  • 0Direct
    57850,57933
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0Direct
    81923,52540
  • 81923 - Double Clp-N motif
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    55545,51445
  • 55545 - beta-N-acetylhexosaminidase-like domain
  • 51445 - (Trans)glycosidases
  • 0Direct
    46785,54928
  • 46785 - "Winged helix" DNA-binding domain
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    90209,90209
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
  • 0Direct
    117018,56091
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 0Direct
    101238,46934
  • 101238 - XPC-binding domain
  • 46934 - UBA-like
  • 0Direct
    58014,51064
  • 58014 - Coiled-coil domain of nucleotide exchange factor GrpE
  • 51064 - Head domain of nucleotide exchange factor GrpE
  • 0Direct
    48452,54277
  • 48452 - TPR-like
  • 54277 - CAD & PB1 domains
  • 0Direct
    54747,46906
  • 54747 - Ribosomal L11/L12e N-terminal domain
  • 46906 - Ribosomal protein L11, C-terminal domain
  • 0Direct
    81301,81891
  • 81301 - Nucleotidyltransferase
  • 81891 - Poly A polymerase C-terminal region-like
  • 0Direct
    46689,46785
  • 46689 - Homeodomain-like
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    52087,101576
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
  • 0Direct
    75471,75471
  • 75471 - YhbY-like
  • 75471 - YhbY-like
  • 0Direct
    48452,46565
  • 48452 - TPR-like
  • 46565 - Chaperone J-domain
  • 0Direct
    48371,50978
  • 48371 - ARM repeat
  • 50978 - WD40 repeat-like
  • 0Direct
    81324,81324
  • 81324 - Voltage-gated potassium channels
  • 81324 - Voltage-gated potassium channels
  • 0Direct
    56672,100879
  • 56672 - DNA/RNA polymerases
  • 100879 - Lesion bypass DNA polymerase (Y-family), little finger domain
  • 0Direct
    53850,55021
  • 53850 - Periplasmic binding protein-like II
  • 55021 - ACT-like
  • 0Direct
    55821,142695
  • 55821 - YrdC/RibB
  • 142695 - RibA-like
  • 0Direct
    141673,50800
  • 141673 - MOSC N-terminal domain-like
  • 50800 - PK beta-barrel domain-like
  • 0Direct
    52540,47446
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
  • 0Direct
    47384,55874
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 0Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0Direct
    57850,52540
  • 57850 - RING/U-box
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    81901,81901
  • 81901 - HCP-like
  • 81901 - HCP-like
  • 0Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0Direct
    52540,90002
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90002 - Hypothetical protein YjiA, C-terminal domain
  • 0Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    55920,46785
  • 55920 - Creatinase/aminopeptidase
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    56219,56219
  • 56219 - DNase I-like
  • 56219 - DNase I-like
  • 0Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
  • 0Direct
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    55874,52172
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
  • 0Direct
    81698,81698
  • 81698 - FF domain
  • 81698 - FF domain
  • 0Direct
    57850,54928
  • 57850 - RING/U-box
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    57756,57756
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    53633,55021
  • 53633 - Carbamate kinase-like
  • 55021 - ACT-like
  • 0Direct
    53223,51735
  • 53223 - Aminoacid dehydrogenase-like, N-terminal domain
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0Direct
    101690,69065
  • 101690 - PAZ domain
  • 69065 - RNase III domain-like
  • 0Direct
    52540,48019
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48019 - post-AAA+ oligomerization domain-like
  • 0Direct
    81383,50978
  • 81383 - F-box domain
  • 50978 - WD40 repeat-like
  • 0Direct
    54980,54980
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    81811,82754
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    54768,54211
  • 54768 - dsRNA-binding domain-like
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0Direct
    48403,57850
  • 48403 - Ankyrin repeat
  • 57850 - RING/U-box
  • 0Direct
    57903,55729
  • 57903 - FYVE/PHD zinc finger
  • 55729 - Acyl-CoA N-acyltransferases (Nat)
  • 0Direct
    53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 0Direct
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    52540,52317
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52317 - Class I glutamine amidotransferase-like
  • 0Direct
    52540,48340
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
  • 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    50249,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    52172,52172
  • 52172 - CheY-like
  • 52172 - CheY-like
  • 0Direct
    54909,54909
  • 54909 - Dimeric alpha+beta barrel
  • 54909 - Dimeric alpha+beta barrel
  • 0Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0Direct
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    50156,52096
  • 50156 - PDZ domain-like
  • 52096 - ClpP/crotonase
  • 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    53187,55031
  • 53187 - Zn-dependent exopeptidases
  • 55031 - Bacterial exopeptidase dimerisation domain
  • 0Direct
    102848,54236
  • 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
  • 54236 - Ubiquitin-like
  • 0Direct
    88946,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 0Direct
    54695,48452
  • 54695 - POZ domain
  • 48452 - TPR-like
  • 0Direct
    52425,48173
  • 52425 - Cryptochrome/photolyase, N-terminal domain
  • 48173 - Cryptochrome/photolyase FAD-binding domain
  • 0Direct
    55021,56112
  • 55021 - ACT-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    53732,52016
  • 53732 - Aconitase iron-sulfur domain
  • 52016 - LeuD/IlvD-like
  • 0Direct
    109604,81301
  • 109604 - HD-domain/PDEase-like
  • 81301 - Nucleotidyltransferase
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    50985,50985
  • 50985 - RCC1/BLIP-II
  • 50985 - RCC1/BLIP-II
  • 0Direct
    54928,57756
  • 54928 - RNA-binding domain, RBD
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    48403,52540
  • 48403 - Ankyrin repeat
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0Direct
    117916,117916
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
  • 0Direct
    55781,47384
  • 55781 - GAF domain-like
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 0Direct
    49899,63887
  • 49899 - Concanavalin A-like lectins/glucanases
  • 63887 - P-domain of calnexin/calreticulin
  • 0Direct
    81296,51445
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
  • 0Direct
    52317,52317
  • 52317 - Class I glutamine amidotransferase-like
  • 52317 - Class I glutamine amidotransferase-like
  • 0Direct
    88723,47807
  • 88723 - PIN domain-like
  • 47807 - 5' to 3' exonuclease, C-terminal subdomain
  • 0Direct
    46689,51905
  • 46689 - Homeodomain-like
  • 51905 - FAD/NAD(P)-binding domain
  • 0Direct
    47473,103506
  • 47473 - EF-hand
  • 103506 - Mitochondrial carrier
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    57938,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    81296,52540
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52518,52467
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52467 - DHS-like NAD/FAD-binding domain
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0008161Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55785,55781,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0Direct
    54928,54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    55781,47384,55874
  • 55781 - GAF domain-like
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 0Direct
    57850,57850,57933
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0Direct
    55781,55785,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    52540,52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    53738,53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 0Direct
    52540,50447,54980
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    46565,57938,49493
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    90209,90209,90209
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
  • 0Direct
    52440,56059,51246
  • 52440 - PreATP-grasp domain
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 51246 - Rudiment single hybrid motif
  • 0Direct
    81383,52047,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 52047 - RNI-like
  • 0Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0Direct
    81296,52540,48403
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
  • 0Direct
    47384,55874,52172
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
  • 0Direct
    117018,56091,50249
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    46785,158702,52540
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    81923,52540,52540
  • 81923 - Double Clp-N motif
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    46689,51905,54373
  • 46689 - Homeodomain-like
  • 51905 - FAD/NAD(P)-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    81698,81698,81698
  • 81698 - FF domain
  • 81698 - FF domain
  • 81698 - FF domain
  • 0Direct
    82919,53300,81995
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    88946,88659,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 0Direct
    53633,55021,55021
  • 53633 - Carbamate kinase-like
  • 55021 - ACT-like
  • 55021 - ACT-like
  • 0Direct
    49785,49785,51445
  • 49785 - Galactose-binding domain-like
  • 49785 - Galactose-binding domain-like
  • 51445 - (Trans)glycosidases
  • 0Direct
    53738,53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
  • 0Direct
    57938,49493,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    54695,48452,48452
  • 54695 - POZ domain
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0Direct
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    50729,57863,48403
  • 50729 - PH domain-like
  • 57863 - ArfGap/RecO-like zinc finger
  • 48403 - Ankyrin repeat
  • 0Direct
    50447,54980,54980
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    158702,52540,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54534,54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    103657,50729,57863
  • 103657 - BAR/IMD domain-like
  • 50729 - PH domain-like
  • 57863 - ArfGap/RecO-like zinc finger
  • 0Direct
    52518,52467,52518
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52467 - DHS-like NAD/FAD-binding domain
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0Direct
    55781,55781,55785
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    46785,158702,81296
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
  • 0Direct
    54534,54534,48452
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 48452 - TPR-like
  • 0Direct
    50249,57756,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    52058,52058,56112
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    57903,57903,55729
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 55729 - Acyl-CoA N-acyltransferases (Nat)
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48452,48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0Direct
    52047,52058,56112
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct
    47364,52540,47446
  • 47364 - Domain of the SRP/SRP receptor G-proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
  • 0Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52047,52047,56112
  • 52047 - RNI-like
  • 52047 - RNI-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    52540,46785,158702
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 0Direct
    46938,52087,101576
  • 46938 - CRAL/TRIO N-terminal domain
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
  • 0Direct
    90229,90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0Direct
    51735,48179,52413
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
  • 0Direct
    161219,161245,57850
  • 161219 - CHY zinc finger-like
  • 161245 - Zinc hairpin stack
  • 57850 - RING/U-box
  • 0Direct
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    81296,51445,51011
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
  • 51011 - Glycosyl hydrolase domain
  • 0Direct
    81995,82919,53300
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)