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Plant structure DEvelopment stage (PDE): LP.02 two leaves visible stage

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   plant structure development stage [PO:0009012] <7>
+ + + + + 5:   whole plant development stage [PO:0007033] <3>(321|479) (321|217|77)
+ + + + + 5:   life of whole plant stage [PO:0025337] <2>(317|475) (317|215|77)
+ + + + 4:   sporophyte development stage [PO:0028002] <5>(317|475) (317|215|77)
+ + + 3:   sporophyte vegetative stage [PO:0007134] <6>(316|474) (316|215|77)
+ + 2:   1 main shoot growth stage [PO:0007112] <3>(204|324) (204|143|54)
+ 1:   leaf production stage [PO:0007133] <20>(204|322) (204|143|54)
0:   LP.02 two leaves visible stage [PO:0007098](139|237) (141|97|40)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
RibA-like0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
YrdC/RibB0Direct
Ribosomal protein S20Direct
RplX-like0Direct
Expressed protein At2g23090/F21P24.150Direct
PapD-like0Direct
Signal peptide-binding domain0Direct
lambda repressor-like DNA-binding domains0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
Electron transport accessory proteins0Direct
RraA-like0Direct
CYTH-like phosphatases0Direct
S-adenosylmethionine synthetase0Direct
Serine metabolism enzymes domain0Direct
Preprotein translocase SecE subunit0Direct
beta-sandwich domain of Sec23/240Direct
LuxS/MPP-like metallohydrolase0Direct
SIS domain0Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
Folate-binding domain0Direct
Chelatase0Direct
Tetrahydrobiopterin biosynthesis enzymes-like0Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
Succinyl-CoA synthetase domains0Direct
Ribosomal protein L40Direct
Tetrapyrrole methylase0Direct
Ribosomal protein L19 (L19e)0Direct
Ribosomal proteins L15p and L18e0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
Rubredoxin-like0Direct
Formyltransferase0Direct
Lipoxigenase0Direct
Sigma3 and sigma4 domains of RNA polymerase sigma factors0Direct
Ribosomal protein L10-like0Direct
Quinoprotein alcohol dehydrogenase-like0Direct
N-terminal domain of the delta subunit of the F1F0-ATP synthase0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Composite domain of metallo-dependent hydrolases0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
Amine oxidase catalytic domain0Direct
Ribosomal protein L140Direct
Phosphoglucomutase, first 3 domains0Direct
Casein kinase II beta subunit0Direct
Heme-dependent catalase-like0Direct
Seven-hairpin glycosidases0Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
Preprotein translocase SecY subunit0Direct
TAZ domain0Direct
LigT-like0Direct
Acyl-CoA binding protein0Direct
Ribosomal protein S100Direct
Diaminopimelate epimerase-like0Direct
PLP-binding barrel0Direct
Mog1p/PsbP-like0Direct
Tautomerase/MIF0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Tim10-like0Direct
MurD-like peptide ligases, catalytic domain0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
Phosphoglycerate kinase0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
MurD-like peptide ligases, peptide-binding domain0Direct
BolA-like0Direct
LeuD/IlvD-like0Direct
Sec1/munc18-like (SM) proteins0Direct
LysM domain0Direct
Peptide methionine sulfoxide reductase0Direct
AMPKBI-like0Direct
Head domain of nucleotide exchange factor GrpE0Direct
Ribosomal protein L29 (L29p)0Direct
AF1104-like0Direct
Amidase signature (AS) enzymes0Direct
Nicotinate/Quinolinate PRTase N-terminal domain-like0Direct
Oxygen-evolving enhancer protein 3,0Direct
ssDNA-binding transcriptional regulator domain0Direct
Nicotinate/Quinolinate PRTase C-terminal domain-like0Direct
Ribosomal protein S60Direct
Ribosomal L11/L12e N-terminal domain0Direct
TATA-box binding protein-like0Direct
Ribosomal protein L39e0Direct
RL5-like0Direct
Ligand-binding domain in the NO signalling and Golgi transport0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
XPC-binding domain0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
tRNA-binding arm0Direct
FKBP-like0Direct
Pentapeptide repeat-like0Direct
P-domain of calnexin/calreticulin0Direct
Cytochrome c0Direct
Release factor0Direct
Mss4-like0Direct
Helical domain of Sec23/240Direct
Zn-finger domain of Sec23/240Direct
Nucleoside diphosphate kinase, NDK0Direct
Cu,Zn superoxide dismutase-like0Direct
alpha/beta knot0Direct
eIF1-like0Direct
Ribosomal protein L31e0Direct
R3H domain0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
FAD-dependent thiol oxidase0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Supernatant protein factor (SPF), C-terminal domain0Direct
Transducin (alpha subunit), insertion domain0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
SH3-domain0Direct
NHL repeat0Direct
Ribosomal protein L130Direct
Metallo-dependent hydrolases0Direct
GINS helical bundle-like0Direct
Peptidyl-tRNA hydrolase II0Direct
Lipocalins0Direct
Ribosomal protein L30p/L7e0Direct
L28p-like0Direct
Prokaryotic ribosomal protein L170Direct
Putative isomerase YbhE0Direct
Phosphoglucomutase, C-terminal domain0Direct
S15/NS1 RNA-binding domain0Direct
Ribosomal protein L10Direct
EF-G C-terminal domain-like0Direct
Dimeric alpha+beta barrel0Direct
GlnB-like0Direct
Aconitase iron-sulfur domain0Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
Prokaryotic type I DNA topoisomerase0Direct
Hypothetical protein YjiA, C-terminal domain0Direct
BSD domain-like0Direct
HesB-like domain0Direct
PX domain0Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
Chorismate mutase II0Direct
Endosomal sorting complex assembly domain0Direct
EGF/Laminin0Direct
Glycolipid transfer protein, GLTP0Direct
6-phosphogluconate dehydrogenase C-terminal domain-like0.0003723Direct
Sm-like ribonucleoproteins0.0008611Direct


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Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
SH3-domain0Direct
Trehalose-6-phosphate synthase, OtsA0Direct
Peptidyl-tRNA hydrolase II0Direct
RelA/SpoT domain0Direct
Tail specific protease, catalytic domain0Direct
PAPS reductase-like0Direct
Phytochrome-specific domain0Direct
Ran-binding domain0Direct
ZZ domain0Direct
SpoU-like RNA 2'-O ribose methyltransferase0Direct
Cytidylyltransferase0Direct
AMPKBI-like0Direct
Serine acetyltransferase0Direct
Acyl-ACP thioesterase-like0Direct
Ribosomal protein S100Direct
Plus30Direct
Histidine kinase0Direct
C5 cytosine-specific DNA methylase, DCM0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Tim10/DDP0Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
DNA polymerase III clamp loader subunits, C-terminal domain0Direct
ATP sulfurylase catalytic domain0Direct
Formate/glycerate dehydrogenases, substrate-binding domain0Direct
CAF1-like ribonuclease0Direct
Ribosomal protein L30p/L7e0Direct
Ribosomal protein L39e0Direct
Ribosomal protein L40Direct
Trunk domain of Sec23/240Direct
Ribosomal protein L10Direct
Ribosomal protein S20Direct
Lipoxigenase N-terminal domain0Direct
Deoxycytidylate deaminase-like0Direct
GroES0Direct
Ribosomal proteins L15p and L18e0Direct
eIF5a N-terminal domain-like0Direct
Peptide methionine sulfoxide reductase0Direct
Pentapeptide repeats0Direct
RWD domain0Direct
Tetrapyrrole methylase0Direct
D-ribulose-5-phosphate 3-epimerase0Direct
PNP-oxidase like0Direct
LEA14-like0Direct
Clp protease, ClpP subunit0Direct
PDI-like0Direct
RuBisCo LSMT catalytic domain0Direct
Linker histone H1/H50Direct
BolA-like0Direct
Glyoxalase II (hydroxyacylglutathione hydrolase)0Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
Transcriptional coactivator PC4 C-terminal domain0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
Oxygen-evolving enhancer protein 3,0Direct
Release factor0Direct
Heme-dependent catalases0Direct
Reductases0Direct
Ribosomal protein L29 (L29p)0Direct
ATP sulfurylase N-terminal domain0Direct
Sec63 N-terminal domain0Direct
Dihydrodipicolinate reductase-like0Direct
Acyl-CoA binding protein0Direct
S-adenosylmethionine synthetase0Direct
Ribosomal protein L140Direct
Cdc48 N-terminal domain-like0Direct
Preprotein translocase SecY subunit0Direct
TAZ domain0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Ring hydroxylating alpha subunit ISP domain0Direct
5' nucleotidase-like0Direct
LplA-like0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
Methionine aminopeptidase, insert domain0Direct
Ribosomal protein L19 (L19e)0Direct
PCI domain (PINT motif)0Direct
Plant transcriptional regulator PBF-20Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Clathrin coat assembly domain0Direct
Plant stress-induced protein0Direct
Ribosomal L11/L12e N-terminal domain0Direct
Class I alpha-1;2-mannosidase, catalytic domain0Direct
GABARAP-like0Direct
Eps15 homology domain (EH domain)0Direct
VHS domain0Direct
G domain-linked domain0Direct
Sec1/munc18-like (SM) proteins0Direct
Ubiquitin activating enzymes (UBA)0Direct
Casein kinase II beta subunit0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
Ribosomal protein L30Direct
SelR domain0Direct
Tryptophan biosynthesis enzymes0Direct
Amine oxidase catalytic domain0Direct
RNB domain-like0Direct
Ribosomal protein L10e0Direct
Band 7/SPFH domain0Direct
PUA domain0Direct
Signal peptide-binding domain0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
DNase I-like0Direct
NadC N-terminal domain-like0Direct
Pseudouridine synthase II TruB0Direct
Choline kinase0Direct
UBX domain0Direct
HIT (HINT, histidine triad) family of protein kinase-interacting proteins0Direct
RNA polymerase II subunit RBP4 (RpoF)0Direct
D-ribose-5-phosphate isomerase (RpiA), catalytic domain0Direct
Ribosomal protein S60Direct
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
HesB-like domain0Direct
LON domain-like0Direct
Formate/glycerate dehydrogenases, NAD-domain0Direct
Poly(ADP-ribose) polymerase, C-terminal domain0Direct
Helical domain of Sec23/240Direct
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB0Direct
Oxidoreductase molybdopterin-binding domain0Direct
beta-sandwich domain of Sec23/240Direct
YicI N-terminal domain-like0Direct
Ribosomal protein L31e0Direct
NadC C-terminal domain-like0Direct
GAPDH-like0Direct
2Fe-2S ferredoxin-related0Direct
Ribosomal protein L130Direct
Glyoxalase I (lactoylglutathione lyase)0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0Direct
CAT-like0Direct
Plant lipoxigenases0Direct
B56-like0Direct
alpha-Amylases, C-terminal beta-sheet domain0Direct
FAD-dependent thiol oxidase0Direct
RplX-like0Direct
Calnexin/calreticulin0Direct
BSD domain0Direct
HEAT repeat0Direct
Preprotein translocase SecE subunit0Direct
Amidase signature (AS) enzymes0Direct
RNA-polymerase beta0Direct
MutT-like0Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0Direct
SerA intervening domain-like0Direct
Rps19E-like0Direct
Prolyl oligopeptidase, N-terminal domain0Direct
UDP-glucose pyrophosphorylase0Direct
LeuD-like0Direct
AF1104-like0Direct
PhzC/PhzF-like0Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
Ribosomal protein S27e0Direct
Neurolysin-like0Direct
Sec63 C-terminal domain-like0Direct
Molybdenum-containing oxidoreductases-like dimerisation domain0Direct
Aminomethyltransferase folate-binding domain0Direct
FKBP immunophilin/proline isomerase0Direct
IF2B-like0Direct
HD domain0Direct
NifU C-terminal domain-like0Direct
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain0Direct
Class I aldolase0Direct
P-domain of calnexin/calreticulin0Direct
Spermidine synthase0Direct
RNase Z-like0Direct
Rubredoxin0Direct
rRNA adenine dimethylase-like0Direct
IPP isomerase-like0Direct
6-phosphogluconate dehydrogenase-like, N-terminal domain0Direct
Ribosomal proteins L24p and L21e0Direct
Ribosomal S5 protein, N-terminal domain0Direct
Starch-binding domain0Direct
Folylpolyglutamate synthetase0Direct
Ribosomal protein S130Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
EDF1-like0Direct
Cystatins0Direct
AMPK-beta glycogen binding domain-like0Direct
L23p0Direct
Prokaryotic type I DNA topoisomerase0Direct
MPP-like0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
RraA-like0Direct
LysM domain0Direct
MSP-like0Direct
HspBP1 domain0Direct
Sigma4 domain0Direct
N-acetyl-l-glutamate kinase0Direct
Zn-finger domain of Sec23/240Direct
gamma-carbonic anhydrase-like0Direct
Hypothetical protein HI13170Direct
R3H domain0Direct
Hypothetical protein YjiA, C-terminal domain0Direct
Diacylglycerol kinase-like0Direct
Succinyl-CoA synthetase, beta-chain, N-terminal domain0Direct
Nucleoside diphosphate kinase, NDK0Direct
Aconitase iron-sulfur domain0Direct
DJ-1/PfpI0Direct
Allosteric chorismate mutase0Direct
GAT domain0Direct
Sedlin (SEDL)0Direct
MIF-related0Direct
BphP N-terminal domain-like0Direct
CoA-binding domain0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
eIF1-like0Direct
Ribosomal protein L10-like0Direct
WrbA-like0Direct
N-type ATP pyrophosphatases0Direct
Ribosomal protein L190Direct
Head domain of nucleotide exchange factor GrpE0Direct
Formyltransferase0Direct
Phosphoglucomutase, first 3 domains0Direct
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain0Direct
Phosphoglucomutase, C-terminal domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Prokaryotic ribosomal protein L170Direct
Class-II DAHP synthetase0Direct
monodomain cytochrome c0Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
Ribosomal protein L50Direct
EF-G/eEF-2 domains III and V0Direct
Ribosomal protein L37e0Direct
PX domain0Direct
Aspartokinase allosteric domain-like0Direct
beta-Phosphoglucomutase-like0Direct
Cu,Zn superoxide dismutase-like0Direct
XPC-binding domain0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
NHL repeat0Direct
Glycolipid transfer protein, GLTP0Direct
Succinyl-CoA synthetase domains0Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
RibA-like0Direct
Phosphoglycerate kinase0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
PsbP-like0Direct
Translational machinery components0Direct
Ribosomal protein S150Direct
Cytochrome b50Direct
Myf domain0Direct


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sec1/munc18-like (SM) proteins0Direct
Ribosomal protein L31e0Direct
Ribosomal protein L130Direct
EF-G C-terminal domain-like0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
Ribosomal protein L30p/L7e0Direct
FKBP-like0Direct
Nucleoside diphosphate kinase, NDK0Direct
Ribosomal protein L140Direct
LigT-like0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
Seven-hairpin glycosidases0Direct
Ribosomal protein L39e0Direct
Succinyl-CoA synthetase domains0Direct
Ribosomal protein L10Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
Acyl-CoA binding protein0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
MurD-like peptide ligases, peptide-binding domain0Direct
Phosphoglucomutase, first 3 domains0Direct
Zn-finger domain of Sec23/240Direct
Ribosomal protein L29 (L29p)0Direct
Mss4-like0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
Glycolipid transfer protein, GLTP0Direct
AMPKBI-like0Direct
Phosphoglucomutase, C-terminal domain0Direct
L28p-like0Direct
Release factor0Direct
RplX-like0Direct
Ligand-binding domain in the NO signalling and Golgi transport0Direct
Signal peptide-binding domain0Direct
PapD-like0Direct
LuxS/MPP-like metallohydrolase0Direct
eIF1-like0Direct
Prokaryotic type I DNA topoisomerase0Direct
EGF/Laminin0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
Tetrahydrobiopterin biosynthesis enzymes-like0Direct
Ribosomal proteins L15p and L18e0Direct
Serine metabolism enzymes domain0Direct
Hypothetical protein YjiA, C-terminal domain0Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
Electron transport accessory proteins0Direct
P-domain of calnexin/calreticulin0Direct
FAD-dependent thiol oxidase0Direct
Metallo-dependent hydrolases0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Preprotein translocase SecE subunit0Direct
Prokaryotic ribosomal protein L170Direct
S15/NS1 RNA-binding domain0Direct
Nicotinate/Quinolinate PRTase C-terminal domain-like0Direct
RL5-like0Direct
NHL repeat0Direct
ssDNA-binding transcriptional regulator domain0Direct
N-terminal domain of the delta subunit of the F1F0-ATP synthase0Direct
Lipocalins0Direct
Ribosomal protein S60Direct
Phosphoglycerate kinase0Direct
Amidase signature (AS) enzymes0Direct
PLP-binding barrel0Direct
Preprotein translocase SecY subunit0Direct
Folate-binding domain0Direct
Casein kinase II beta subunit0Direct
Chorismate mutase II0Direct
BolA-like0Direct
Quinoprotein alcohol dehydrogenase-like0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
CYTH-like phosphatases0Direct
Diaminopimelate epimerase-like0Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
Formyltransferase0Direct
LysM domain0Direct
GINS helical bundle-like0Direct
LeuD/IlvD-like0Direct
tRNA-binding arm0Direct
Cytochrome c0Direct
Putative isomerase YbhE0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Dimeric alpha+beta barrel0Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
Tim10-like0Direct
SIS domain0Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
alpha/beta knot0Direct
Helical domain of Sec23/240Direct
Oxygen-evolving enhancer protein 3,0Direct
Tetrapyrrole methylase0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
Endosomal sorting complex assembly domain0Direct
Peptidyl-tRNA hydrolase II0Direct
SH3-domain0Direct
TAZ domain0Direct
Tautomerase/MIF0Direct
Pentapeptide repeat-like0Direct
Ribosomal protein L40Direct
YrdC/RibB0Direct
GlnB-like0Direct
MurD-like peptide ligases, catalytic domain0Direct
R3H domain0Direct
PX domain0Direct
Supernatant protein factor (SPF), C-terminal domain0Direct
XPC-binding domain0Direct
Aconitase iron-sulfur domain0Direct
TATA-box binding protein-like0Direct
Ribosomal protein S20Direct
Rubredoxin-like0Direct
Ribosomal protein L19 (L19e)0Direct
beta-sandwich domain of Sec23/240Direct
S-adenosylmethionine synthetase0Direct
Lipoxigenase0Direct
Head domain of nucleotide exchange factor GrpE0Direct
Heme-dependent catalase-like0Direct
lambda repressor-like DNA-binding domains0Direct
Nicotinate/Quinolinate PRTase N-terminal domain-like0Direct
Sigma3 and sigma4 domains of RNA polymerase sigma factors0Direct
AF1104-like0Direct
Amine oxidase catalytic domain0Direct
RraA-like0Direct
Mog1p/PsbP-like0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Ribosomal protein S100Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
Cu,Zn superoxide dismutase-like0Direct
BSD domain-like0Direct
RibA-like0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
Ribosomal L11/L12e N-terminal domain0Direct
Chelatase0Direct
HesB-like domain0Direct
Ribosomal protein L10-like0Direct
Expressed protein At2g23090/F21P24.150Direct
Composite domain of metallo-dependent hydrolases0Direct
Peptide methionine sulfoxide reductase0Direct
Transducin (alpha subunit), insertion domain0Direct
6-phosphogluconate dehydrogenase C-terminal domain-like0.0003148Direct
Sm-like ribonucleoproteins0.0007293Direct
NAD(P)-binding Rossmann-fold domains0.0008562Direct
RNA-binding domain, RBD0.0009003Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52317,52317
  • 52317 - Class I glutamine amidotransferase-like
  • 52317 - Class I glutamine amidotransferase-like
  • 0Direct
    55821,142695
  • 55821 - YrdC/RibB
  • 142695 - RibA-like
  • 0Direct
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0Direct
    158702,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    50022,55961
  • 50022 - ISP domain
  • 55961 - Bet v1-like
  • 0Direct
    54768,54211
  • 54768 - dsRNA-binding domain-like
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0Direct
    53756,56784
  • 53756 - UDP-Glycosyltransferase/glycogen phosphorylase
  • 56784 - HAD-like
  • 0Direct
    48403,52540
  • 48403 - Ankyrin repeat
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    47364,52540
  • 47364 - Domain of the SRP/SRP receptor G-proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    50447,54980
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    100950,75445
  • 100950 - NagB/RpiA/CoA transferase-like
  • 75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain
  • 0Direct
    53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    48452,54277
  • 48452 - TPR-like
  • 54277 - CAD & PB1 domains
  • 0Direct
    51338,51556
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
  • 0Direct
    52540,52058
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52058 - L domain-like
  • 0Direct
    117916,117916
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
  • 0Direct
    55920,46785
  • 55920 - Creatinase/aminopeptidase
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    49899,63887
  • 49899 - Concanavalin A-like lectins/glucanases
  • 63887 - P-domain of calnexin/calreticulin
  • 0Direct
    47473,52540
  • 47473 - EF-hand
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    101908,56219
  • 101908 - Putative isomerase YbhE
  • 56219 - DNase I-like
  • 0Direct
    88798,50249
  • 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0Direct
    54980,54980
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    53732,52016
  • 53732 - Aconitase iron-sulfur domain
  • 52016 - LeuD/IlvD-like
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54747,46906
  • 54747 - Ribosomal L11/L12e N-terminal domain
  • 46906 - Ribosomal protein L11, C-terminal domain
  • 0Direct
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    55785,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
  • 0Direct
    55781,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    56524,81296
  • 56524 - Oxidoreductase molybdopterin-binding domain
  • 81296 - E set domains
  • 0Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct
    57850,54928
  • 57850 - RING/U-box
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    52283,51735
  • 52283 - Formate/glycerate dehydrogenase catalytic domain-like
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    54416,54416
  • 54416 - Amine oxidase N-terminal region
  • 54416 - Amine oxidase N-terminal region
  • 0Direct
    55874,52172
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,90002
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90002 - Hypothetical protein YjiA, C-terminal domain
  • 0Direct
    81383,54518
  • 81383 - F-box domain
  • 54518 - Tubby C-terminal domain-like
  • 0Direct
    52540,47446
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
  • 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    52402,52833
  • 52402 - Adenine nucleotide alpha hydrolases-like
  • 52833 - Thioredoxin-like
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    81995,82919
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 0Direct
    81811,82754
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    50156,52096
  • 50156 - PDZ domain-like
  • 52096 - ClpP/crotonase
  • 0Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0Direct
    46785,158702
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 0Direct
    50104,50249
  • 50104 - Translation proteins SH3-like domain
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
  • 0Direct
    54416,49998
  • 54416 - Amine oxidase N-terminal region
  • 49998 - Amine oxidase catalytic domain
  • 0Direct
    102848,54236
  • 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
  • 54236 - Ubiquitin-like
  • 0Direct
    101238,46934
  • 101238 - XPC-binding domain
  • 46934 - UBA-like
  • 0Direct
    53850,55021
  • 53850 - Periplasmic binding protein-like II
  • 55021 - ACT-like
  • 0Direct
    57850,57933
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0Direct
    52425,48173
  • 52425 - Cryptochrome/photolyase, N-terminal domain
  • 48173 - Cryptochrome/photolyase FAD-binding domain
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    103481,103481
  • 103481 - Multidrug resistance efflux transporter EmrE
  • 103481 - Multidrug resistance efflux transporter EmrE
  • 0Direct
    50249,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    58014,51064
  • 58014 - Coiled-coil domain of nucleotide exchange factor GrpE
  • 51064 - Head domain of nucleotide exchange factor GrpE
  • 0Direct
    56235,52402
  • 56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
  • 52402 - Adenine nucleotide alpha hydrolases-like
  • 0Direct
    53383,53383
  • 53383 - PLP-dependent transferases
  • 53383 - PLP-dependent transferases
  • 0Direct
    55021,56112
  • 55021 - ACT-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    158702,81296
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
  • 0Direct
    48371,50978
  • 48371 - ARM repeat
  • 50978 - WD40 repeat-like
  • 0Direct
    52087,101576
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
  • 0Direct
    158639,63748
  • 158639 - ENT-like
  • 63748 - Tudor/PWWP/MBT
  • 0Direct
    53633,55021
  • 53633 - Carbamate kinase-like
  • 55021 - ACT-like
  • 0Direct
    101690,69065
  • 101690 - PAZ domain
  • 69065 - RNase III domain-like
  • 0Direct
    109604,81301
  • 109604 - HD-domain/PDEase-like
  • 81301 - Nucleotidyltransferase
  • 0Direct
    51735,143548
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
  • 0Direct
    54909,54909
  • 54909 - Dimeric alpha+beta barrel
  • 54909 - Dimeric alpha+beta barrel
  • 0Direct
    47473,103506
  • 47473 - EF-hand
  • 103506 - Mitochondrial carrier
  • 0Direct
    88697,52374
  • 88697 - PUA domain-like
  • 52374 - Nucleotidylyl transferase
  • 0Direct
    88659,88659
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 0Direct
    49723,48484
  • 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
  • 48484 - Lipoxigenase
  • 0Direct
    57850,49599
  • 57850 - RING/U-box
  • 49599 - TRAF domain-like
  • 0Direct
    56112,48371
  • 56112 - Protein kinase-like (PK-like)
  • 48371 - ARM repeat
  • 0Direct
    54534,48452
  • 54534 - FKBP-like
  • 48452 - TPR-like
  • 0Direct
    48403,57850
  • 48403 - Ankyrin repeat
  • 57850 - RING/U-box
  • 0Direct
    47384,55874
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 0Direct
    48179,52413
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
  • 0Direct
    54637,54637
  • 54637 - Thioesterase/thiol ester dehydrase-isomerase
  • 54637 - Thioesterase/thiol ester dehydrase-isomerase
  • 0Direct
    52540,48403
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
  • 0Direct
    81296,51445
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
  • 0Direct
    88946,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 0Direct
    82199,81822
  • 82199 - SET domain
  • 81822 - RuBisCo LSMT C-terminal, substrate-binding domain
  • 0Direct
    46785,54928
  • 46785 - "Winged helix" DNA-binding domain
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    52172,52172
  • 52172 - CheY-like
  • 52172 - CheY-like
  • 0Direct
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    81296,52540
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    143548,55021
  • 143548 - Serine metabolism enzymes domain
  • 55021 - ACT-like
  • 0Direct
    51735,48179
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 0.0004497Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    53738,53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 0Direct
    81296,51445,51011
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
  • 51011 - Glycosyl hydrolase domain
  • 0Direct
    52540,50447,54980
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    51735,143548,55021
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
  • 55021 - ACT-like
  • 0Direct
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct
    81296,52540,48403
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
  • 0Direct
    53633,55021,55021
  • 53633 - Carbamate kinase-like
  • 55021 - ACT-like
  • 55021 - ACT-like
  • 0Direct
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54416,54416,49998
  • 54416 - Amine oxidase N-terminal region
  • 54416 - Amine oxidase N-terminal region
  • 49998 - Amine oxidase catalytic domain
  • 0Direct
    55785,55781,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0Direct
    55781,55781,55785
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    52540,46785,158702
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 0Direct
    158702,52540,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0Direct
    54534,54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    88946,88659,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 0Direct
    57850,57850,57933
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0Direct
    52283,51735,143548
  • 52283 - Formate/glycerate dehydrogenase catalytic domain-like
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
  • 0Direct
    50249,57756,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    46785,158702,52540
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52047,52058,56112
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    55781,47384,55874
  • 55781 - GAF domain-like
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 0Direct
    53738,53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
  • 0Direct
    55781,55785,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    52540,52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    81995,82919,53300
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    50447,54980,54980
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    47364,52540,47446
  • 47364 - Domain of the SRP/SRP receptor G-proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
  • 0Direct
    47384,55874,52172
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
  • 0Direct
    46938,52087,101576
  • 46938 - CRAL/TRIO N-terminal domain
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
  • 0Direct
    51735,48179,52413
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
  • 0Direct
    46785,158702,81296
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    82919,53300,81995
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    90209,90209,90209
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
  • 0Direct
    54534,54534,48452
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 48452 - TPR-like
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct


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