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Plant structure DEvelopment stage (PDE): LP.06 six leaves visible stage
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Phenotype Ontology
Like Gene Ontology (GO), phenotypy ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Phenotype ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology (DO) DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology (HP) HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology (MP) MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology (WP) WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology (YP) Based on YP which is the major contributor to the Ascomycete phenotype ontology, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology (FP) FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology (FA) FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology (ZA) ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology (XA) XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology (AP) As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology (EC) Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- DrugBank ATC (DB) Ontology (DB) In the Anatomical Therapeutic Chemical (ATC) classification system, drugs are classified in groups at five different levels according to the organ or system (1st level, anatomical main group) on which they act and their therapeutic (2nd level, therapeutic subgroup), pharmacological (3rd level, pharmacological subgroup) and chemical properties (4th level, chemical subgroup; 5th level, chemical substance). Only drugs in DrugBank are considered.
- UniProtKB KeyWords (KW) Ontology (KW) Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- UniProtKB UniPathway (UP) Ontology (UP) UP is a fully manually curated resource for the representation and annotation of metabolic pathways, being used as controlled vocabulary for pathway annotation in UniProtKB.
Structural Domain Phenotype Ontology and its Annotations
Structural Classification of Proteins (SCOP) classifies evolutionary-related domains into Superfamily level and Family level. Using the phenotype ontologies above, we have generated the domain-centric phenotype annotations, and further identified those phenotype terms which are the most informative to annotate SCOP domains. Promisingly, domain-centric phenotypic annotations can serve as an alternative starting point to explore genotype-phenotype relationships. We provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Structural Domain Disease Ontology (DO) Ontology (SDDO) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DO.txt, and the corresponding ontology:SDDO.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Human Phenotype (HP) Ontology (SDHP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2HP.txt, and the corresponding ontology:SDHP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Mouse Phenotype (MP) Ontology (SDMP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2MP.txt, and the corresponding ontology:SDMP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Worm Phenotype (WP) Ontology (SDWP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2WP.txt, and the corresponding ontology:SDWP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Yeast Phenotype (YP) Ontology (SDYP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2YP.txt, and the corresponding ontology:SDYP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Phenotype (FP) Ontology (SDFP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FP.txt, and the corresponding ontology:SDFP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Anatomy (FA) Ontology (SDFA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FA.txt, and the corresponding ontology:SDFA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Zebrafish Anatomy (ZA) Ontology (SDZA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2ZA.txt, and the corresponding ontology:SDZA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Xenopus Anatomy (XA) Ontology (SDXA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2XA.txt, and the corresponding ontology:SDXA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Arabidopsis Plant Ontology (AP) Ontology (SDAP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2AP.txt, and the corresponding ontology:SDAP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Enzyme Commission (EC) Ontology (SDEC) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2EC.txt, and the corresponding ontology:SDEC.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain DrugBank ATC (DB) Ontology (SDDB) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DB.txt, and the corresponding ontology:SDDB.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB KeyWords (KW) Ontology (SDKW) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2KW.txt, and the corresponding ontology:SDKW.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB UniPathway (UP) Ontology (SDUP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2UP.txt, and the corresponding ontology:SDUP.txt) and mysql tables (Domain2PO.sql.gz).
Supra-domain Phenotype Ontology and its Annotations
Although domain-centric annotations hold great promise in describing phenotypic nature of independent domains, most domains themselves may not just work alone. In multi-domain proteins, they may be combined together to form distinct domain architectures. The recombination of the existing domains is considered as one of major driving forces for phenotypic diversificaation. As an extension, we have also generated supra-domain phenotype ontology and its annotations. Compared to domain-centric phenotype ontology and annotations (SCOP domains at the Superfamily level and Family level), this version focuses on supra-domains and individual SCOP domains ONLY at the Superfamily level. Besides, in terms of individual superfamilies, their annotations from the domain-centric version may be different from those from supra-domains version. Depending on your focus, the former should be used for the consideration of both the Superfamily level and Family level, otherwise the latter should be used if you are interested in domain combinations. Also, we provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Supra-domain Domain Disease Ontology (DO) Ontology (SPDO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DO.txt, and the corresponding ontology:SPDO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Human Phenotype (HP) Ontology (SPHO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2HP.txt, and the corresponding ontology:SPHO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Mouse Phenotype (MP) Ontology (SPMP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2MP.txt, and the corresponding ontology:SPMP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Worm Phenotype (WP) Ontology (SPWP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2WP.txt, and the corresponding ontology:SPWP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Yeast Phenotype (YP) Ontology (SPYP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2YP.txt, and the corresponding ontology:SPYP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Phenotype (FP) Ontology (SPFP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FP.txt, and the corresponding ontology:SPFP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Anatomy (FA) Ontology (SPFA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FA.txt, and the corresponding ontology:SPFA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Zebrafish Anatomy (ZA) Ontology (SPZA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2ZA.txt, and the corresponding ontology:SPZA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Xenopus Anatomy (XA) Ontology (SPXA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2XA.txt, and the corresponding ontology:SPXA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Arabidopsis Plant Ontology (AP) Ontology (SPAP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2AP.txt, and the corresponding ontology:SPAP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Enzyme Commission (EC) Ontology (SPEC) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2EC.txt, and the corresponding ontology:SPEC.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain DrugBank ATC (DB) Ontology (SPDB) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DB.txt, and the corresponding ontology:SPDB.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB KeyWords (KW) Ontology (SPKW) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2KW.txt, and the corresponding ontology:SPKW.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB UniPathway (UP) Ontology (SPUP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2UP.txt, and the corresponding ontology:SPUP.txt) and mysql tables (SP2PO.sql.gz).
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Superfamily(show details)
Superfamily domains annotated to this AP term (SDAP level: Least Informative)
Highlighted in gray are those with FDR_all>0.001
SCOP term | FDR (all) | Annotation (direct or inherited) |
RibA-like | 0 | DIRECT |
YrdC/RibB | 0 | DIRECT |
Ribosomal protein S2 | 0 | DIRECT |
RplX-like | 0 | DIRECT |
Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
PapD-like | 0 | DIRECT |
lambda repressor-like DNA-binding domains | 0 | DIRECT |
Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
Electron transport accessory proteins | 0 | DIRECT |
RraA-like | 0 | DIRECT |
CYTH-like phosphatases | 0 | DIRECT |
S-adenosylmethionine synthetase | 0 | DIRECT |
Cyclophilin-like | 0 | DIRECT |
Serine metabolism enzymes domain | 0 | DIRECT |
Preprotein translocase SecE subunit | 0 | DIRECT |
beta-sandwich domain of Sec23/24 | 0 | DIRECT |
Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
LuxS/MPP-like metallohydrolase | 0 | DIRECT |
SIS domain | 0 | DIRECT |
Folate-binding domain | 0 | DIRECT |
RNase III domain-like | 0 | DIRECT |
Chelatase | 0 | DIRECT |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
Succinyl-CoA synthetase domains | 0 | DIRECT |
Ribosomal protein L4 | 0 | DIRECT |
Ribosomal protein L19 (L19e) | 0 | DIRECT |
Ribosomal proteins L15p and L18e | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
Rubredoxin-like | 0 | DIRECT |
Formyltransferase | 0 | DIRECT |
Lipoxigenase | 0 | DIRECT |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
Enolase N-terminal domain-like | 0 | DIRECT |
Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
Amine oxidase catalytic domain | 0 | DIRECT |
Phosphoglucomutase, first 3 domains | 0 | DIRECT |
Casein kinase II beta subunit | 0 | DIRECT |
Heme-dependent catalase-like | 0 | DIRECT |
Seven-hairpin glycosidases | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
beta-carbonic anhydrase, cab | 0 | DIRECT |
TAZ domain | 0 | DIRECT |
LigT-like | 0 | DIRECT |
Acyl-CoA binding protein | 0 | DIRECT |
Ribosomal protein S10 | 0 | DIRECT |
Probable bacterial effector-binding domain | 0 | DIRECT |
PLP-binding barrel | 0 | DIRECT |
Mog1p/PsbP-like | 0 | DIRECT |
Tautomerase/MIF | 0 | DIRECT |
Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
Tim10-like | 0 | DIRECT |
Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
NagB/RpiA/CoA transferase-like | 0 | DIRECT |
Phosphoglycerate kinase | 0 | DIRECT |
ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
BolA-like | 0 | DIRECT |
LeuD/IlvD-like | 0 | DIRECT |
Sec1/munc18-like (SM) proteins | 0 | DIRECT |
LysM domain | 0 | DIRECT |
Peptide methionine sulfoxide reductase | 0 | DIRECT |
Enolase C-terminal domain-like | 0 | DIRECT |
AMPKBI-like | 0 | DIRECT |
Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Ribosomal protein L29 (L29p) | 0 | DIRECT |
AF1104-like | 0 | DIRECT |
Amidase signature (AS) enzymes | 0 | DIRECT |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
Ribosomal protein S6 | 0 | DIRECT |
Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
TATA-box binding protein-like | 0 | DIRECT |
Ribosomal protein L39e | 0 | DIRECT |
RL5-like | 0 | DIRECT |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
XPC-binding domain | 0 | DIRECT |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
Creatinase/prolidase N-terminal domain | 0 | DIRECT |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
tRNA-binding arm | 0 | DIRECT |
FKBP-like | 0 | DIRECT |
Pentapeptide repeat-like | 0 | DIRECT |
Carbon-nitrogen hydrolase | 0 | DIRECT |
P-domain of calnexin/calreticulin | 0 | DIRECT |
Creatinase/aminopeptidase | 0 | DIRECT |
Cytochrome c | 0 | DIRECT |
Release factor | 0 | DIRECT |
Mss4-like | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
Molybdenum cofactor-binding domain | 0 | DIRECT |
CO dehydrogenase ISP C-domain like | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
Cu,Zn superoxide dismutase-like | 0 | DIRECT |
eIF1-like | 0 | DIRECT |
Ribosomal protein L31e | 0 | DIRECT |
R3H domain | 0 | DIRECT |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Homocysteine S-methyltransferase | 0 | DIRECT |
Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
Transducin (alpha subunit), insertion domain | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
SH3-domain | 0 | DIRECT |
NHL repeat | 0 | DIRECT |
Ribosomal protein L13 | 0 | DIRECT |
Metallo-dependent hydrolases | 0 | DIRECT |
Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
GINS helical bundle-like | 0 | DIRECT |
Peptidyl-tRNA hydrolase II | 0 | DIRECT |
Lipocalins | 0 | DIRECT |
Ribosomal protein L30p/L7e | 0 | DIRECT |
L28p-like | 0 | DIRECT |
CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
Prokaryotic ribosomal protein L17 | 0 | DIRECT |
Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
FAH | 0 | DIRECT |
S15/NS1 RNA-binding domain | 0 | DIRECT |
Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
Ribosomal protein L25-like | 0 | DIRECT |
Ribosomal protein L1 | 0 | DIRECT |
EF-G C-terminal domain-like | 0 | DIRECT |
Dimeric alpha+beta barrel | 0 | DIRECT |
GlnB-like | 0 | DIRECT |
Aconitase iron-sulfur domain | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
BSD domain-like | 0 | DIRECT |
HesB-like domain | 0 | DIRECT |
PX domain | 0 | DIRECT |
S13-like H2TH domain | 0 | DIRECT |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
Chorismate mutase II | 0 | DIRECT |
Endosomal sorting complex assembly domain | 0 | DIRECT |
Clc chloride channel | 0 | DIRECT |
EGF/Laminin | 0 | DIRECT |
Glycolipid transfer protein, GLTP | 0 | DIRECT |
CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
ACT-like | 0.000167 | DIRECT |
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.000326 | DIRECT |
NAD(P)-binding Rossmann-fold domains | 0.0005295 | DIRECT |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0.000636 | DIRECT |
SCOP term | FDR (all) | Annotation (direct or inherited) |
RibA-like | 0 | Direct |
YrdC/RibB | 0 | Direct |
Ribosomal protein S2 | 0 | Direct |
RplX-like | 0 | Direct |
Expressed protein At2g23090/F21P24.15 | 0 | Direct |
PapD-like | 0 | Direct |
lambda repressor-like DNA-binding domains | 0 | Direct |
Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
Electron transport accessory proteins | 0 | Direct |
RraA-like | 0 | Direct |
CYTH-like phosphatases | 0 | Direct |
S-adenosylmethionine synthetase | 0 | Direct |
Cyclophilin-like | 0 | Direct |
Serine metabolism enzymes domain | 0 | Direct |
Preprotein translocase SecE subunit | 0 | Direct |
beta-sandwich domain of Sec23/24 | 0 | Direct |
Magnesium transport protein CorA, transmembrane region | 0 | Direct |
Gamma-glutamyl cyclotransferase-like | 0 | Direct |
Rhodanese/Cell cycle control phosphatase | 0 | Direct |
LuxS/MPP-like metallohydrolase | 0 | Direct |
SIS domain | 0 | Direct |
Folate-binding domain | 0 | Direct |
RNase III domain-like | 0 | Direct |
Chelatase | 0 | Direct |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
Succinyl-CoA synthetase domains | 0 | Direct |
Ribosomal protein L4 | 0 | Direct |
Ribosomal protein L19 (L19e) | 0 | Direct |
Ribosomal proteins L15p and L18e | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
Rubredoxin-like | 0 | Direct |
Formyltransferase | 0 | Direct |
Lipoxigenase | 0 | Direct |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
Enolase N-terminal domain-like | 0 | Direct |
Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
Composite domain of metallo-dependent hydrolases | 0 | Direct |
Amine oxidase catalytic domain | 0 | Direct |
Phosphoglucomutase, first 3 domains | 0 | Direct |
Casein kinase II beta subunit | 0 | Direct |
Heme-dependent catalase-like | 0 | Direct |
Seven-hairpin glycosidases | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
beta-carbonic anhydrase, cab | 0 | Direct |
TAZ domain | 0 | Direct |
LigT-like | 0 | Direct |
Acyl-CoA binding protein | 0 | Direct |
Ribosomal protein S10 | 0 | Direct |
Probable bacterial effector-binding domain | 0 | Direct |
PLP-binding barrel | 0 | Direct |
Mog1p/PsbP-like | 0 | Direct |
Tautomerase/MIF | 0 | Direct |
Oxidoreductase molybdopterin-binding domain | 0 | Direct |
Tim10-like | 0 | Direct |
Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
NagB/RpiA/CoA transferase-like | 0 | Direct |
Phosphoglycerate kinase | 0 | Direct |
ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
BolA-like | 0 | Direct |
LeuD/IlvD-like | 0 | Direct |
Sec1/munc18-like (SM) proteins | 0 | Direct |
LysM domain | 0 | Direct |
Peptide methionine sulfoxide reductase | 0 | Direct |
Enolase C-terminal domain-like | 0 | Direct |
AMPKBI-like | 0 | Direct |
Head domain of nucleotide exchange factor GrpE | 0 | Direct |
Ribosomal protein L29 (L29p) | 0 | Direct |
AF1104-like | 0 | Direct |
Amidase signature (AS) enzymes | 0 | Direct |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
Oxygen-evolving enhancer protein 3, | 0 | Direct |
ssDNA-binding transcriptional regulator domain | 0 | Direct |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
Ribosomal protein S6 | 0 | Direct |
Ribosomal L11/L12e N-terminal domain | 0 | Direct |
TATA-box binding protein-like | 0 | Direct |
Ribosomal protein L39e | 0 | Direct |
RL5-like | 0 | Direct |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
XPC-binding domain | 0 | Direct |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
Creatinase/prolidase N-terminal domain | 0 | Direct |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
tRNA-binding arm | 0 | Direct |
FKBP-like | 0 | Direct |
Pentapeptide repeat-like | 0 | Direct |
Carbon-nitrogen hydrolase | 0 | Direct |
P-domain of calnexin/calreticulin | 0 | Direct |
Creatinase/aminopeptidase | 0 | Direct |
Cytochrome c | 0 | Direct |
Release factor | 0 | Direct |
Mss4-like | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
Molybdenum cofactor-binding domain | 0 | Direct |
CO dehydrogenase ISP C-domain like | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
Nucleoside diphosphate kinase, NDK | 0 | Direct |
Cu,Zn superoxide dismutase-like | 0 | Direct |
eIF1-like | 0 | Direct |
Ribosomal protein L31e | 0 | Direct |
R3H domain | 0 | Direct |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
Homocysteine S-methyltransferase | 0 | Direct |
Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
Transducin (alpha subunit), insertion domain | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
SH3-domain | 0 | Direct |
NHL repeat | 0 | Direct |
Ribosomal protein L13 | 0 | Direct |
Metallo-dependent hydrolases | 0 | Direct |
Peptidyl-tRNA hydrolase-like | 0 | Direct |
GINS helical bundle-like | 0 | Direct |
Peptidyl-tRNA hydrolase II | 0 | Direct |
Lipocalins | 0 | Direct |
Ribosomal protein L30p/L7e | 0 | Direct |
L28p-like | 0 | Direct |
CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
Prokaryotic ribosomal protein L17 | 0 | Direct |
Phosphoglucomutase, C-terminal domain | 0 | Direct |
FAH | 0 | Direct |
S15/NS1 RNA-binding domain | 0 | Direct |
Bacterial exopeptidase dimerisation domain | 0 | Direct |
Ribosomal protein L25-like | 0 | Direct |
Ribosomal protein L1 | 0 | Direct |
EF-G C-terminal domain-like | 0 | Direct |
Dimeric alpha+beta barrel | 0 | Direct |
GlnB-like | 0 | Direct |
Aconitase iron-sulfur domain | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
Prokaryotic type I DNA topoisomerase | 0 | Direct |
Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
BSD domain-like | 0 | Direct |
HesB-like domain | 0 | Direct |
PX domain | 0 | Direct |
S13-like H2TH domain | 0 | Direct |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
Chorismate mutase II | 0 | Direct |
Endosomal sorting complex assembly domain | 0 | Direct |
Clc chloride channel | 0 | Direct |
EGF/Laminin | 0 | Direct |
Glycolipid transfer protein, GLTP | 0 | Direct |
CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
ACT-like | 0.000167 | Direct |
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.000326 | Direct |
NAD(P)-binding Rossmann-fold domains | 0.0005295 | Direct |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0.000636 | Direct |
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Family(show details)
Family domains annotated to this AP term (SDAP level: Least Informative)
Highlighted in gray are those with FDR_all>0.001
SCOP term | FDR (all) | Annotation (direct or inherited) |
SH3-domain | 0 | DIRECT |
Trehalose-6-phosphate synthase, OtsA | 0 | DIRECT |
Peptidyl-tRNA hydrolase II | 0 | DIRECT |
RelA/SpoT domain | 0 | DIRECT |
Tail specific protease, catalytic domain | 0 | DIRECT |
PAPS reductase-like | 0 | DIRECT |
Phytochrome-specific domain | 0 | DIRECT |
Ran-binding domain | 0 | DIRECT |
ZZ domain | 0 | DIRECT |
Cytidylyltransferase | 0 | DIRECT |
Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
DNA repair glycosylase, 2 C-terminal domains | 0 | DIRECT |
AMPKBI-like | 0 | DIRECT |
Serine acetyltransferase | 0 | DIRECT |
Acyl-ACP thioesterase-like | 0 | DIRECT |
Ribosomal protein S10 | 0 | DIRECT |
Homoserine dehydrogenase-like | 0 | DIRECT |
Plus3 | 0 | DIRECT |
CO dehydrogenase flavoprotein N-terminal domain-like | 0 | DIRECT |
Histidine kinase | 0 | DIRECT |
HAT/Suf repeat | 0 | DIRECT |
C5 cytosine-specific DNA methylase, DCM | 0 | DIRECT |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Tim10/DDP | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
RNase III catalytic domain-like | 0 | DIRECT |
DNA polymerase III clamp loader subunits, C-terminal domain | 0 | DIRECT |
ATP sulfurylase catalytic domain | 0 | DIRECT |
Formate/glycerate dehydrogenases, substrate-binding domain | 0 | DIRECT |
CAF1-like ribonuclease | 0 | DIRECT |
Ribosomal protein L30p/L7e | 0 | DIRECT |
Ribosomal protein L39e | 0 | DIRECT |
SOUL heme-binding protein | 0 | DIRECT |
Cyclophilin (peptidylprolyl isomerase) | 0 | DIRECT |
Ribosomal protein L4 | 0 | DIRECT |
Trunk domain of Sec23/24 | 0 | DIRECT |
(Glycosyl)asparaginase | 0 | DIRECT |
Ribosomal protein L1 | 0 | DIRECT |
Ribosomal protein S2 | 0 | DIRECT |
Lipoxigenase N-terminal domain | 0 | DIRECT |
Deoxycytidylate deaminase-like | 0 | DIRECT |
Ribosomal proteins L15p and L18e | 0 | DIRECT |
eIF5a N-terminal domain-like | 0 | DIRECT |
Peptide methionine sulfoxide reductase | 0 | DIRECT |
Pentapeptide repeats | 0 | DIRECT |
RWD domain | 0 | DIRECT |
D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
Methyl-CpG-binding domain, MBD | 0 | DIRECT |
PNP-oxidase like | 0 | DIRECT |
LEA14-like | 0 | DIRECT |
Clp protease, ClpP subunit | 0 | DIRECT |
Enolase | 0 | DIRECT |
Creatinase/aminopeptidase | 0 | DIRECT |
PDI-like | 0 | DIRECT |
RuBisCo LSMT catalytic domain | 0 | DIRECT |
Linker histone H1/H5 | 0 | DIRECT |
BolA-like | 0 | DIRECT |
Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
NagB-like | 0 | DIRECT |
Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
Release factor | 0 | DIRECT |
Heme-dependent catalases | 0 | DIRECT |
Reductases | 0 | DIRECT |
Ribosomal protein L29 (L29p) | 0 | DIRECT |
ATP sulfurylase N-terminal domain | 0 | DIRECT |
Sec63 N-terminal domain | 0 | DIRECT |
Dihydrodipicolinate reductase-like | 0 | DIRECT |
Acyl-CoA binding protein | 0 | DIRECT |
Thiolase-related | 0 | DIRECT |
S-adenosylmethionine synthetase | 0 | DIRECT |
Cdc48 N-terminal domain-like | 0 | DIRECT |
CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
Single-domain sulfurtransferase | 0 | DIRECT |
TAZ domain | 0 | DIRECT |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | DIRECT |
Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
5' nucleotidase-like | 0 | DIRECT |
LplA-like | 0 | DIRECT |
Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
Methionine aminopeptidase, insert domain | 0 | DIRECT |
Ribosomal protein L19 (L19e) | 0 | DIRECT |
PCI domain (PINT motif) | 0 | DIRECT |
Plant transcriptional regulator PBF-2 | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
Clathrin coat assembly domain | 0 | DIRECT |
Plant stress-induced protein | 0 | DIRECT |
Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
GABARAP-like | 0 | DIRECT |
Eps15 homology domain (EH domain) | 0 | DIRECT |
VHS domain | 0 | DIRECT |
G domain-linked domain | 0 | DIRECT |
Sec1/munc18-like (SM) proteins | 0 | DIRECT |
Casein kinase II beta subunit | 0 | DIRECT |
Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
Ribosomal protein L3 | 0 | DIRECT |
SelR domain | 0 | DIRECT |
Tryptophan biosynthesis enzymes | 0 | DIRECT |
Amine oxidase catalytic domain | 0 | DIRECT |
RNB domain-like | 0 | DIRECT |
Ribosomal protein L10e | 0 | DIRECT |
Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
Band 7/SPFH domain | 0 | DIRECT |
Homocysteine S-methyltransferase | 0 | DIRECT |
PUA domain | 0 | DIRECT |
NadC N-terminal domain-like | 0 | DIRECT |
Pseudouridine synthase II TruB | 0 | DIRECT |
Choline kinase | 0 | DIRECT |
UBX domain | 0 | DIRECT |
HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | DIRECT |
RNA polymerase II subunit RBP4 (RpoF) | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
Ribosomal protein S6 | 0 | DIRECT |
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | DIRECT |
ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
HesB-like domain | 0 | DIRECT |
LON domain-like | 0 | DIRECT |
Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
Aminoacid dehydrogenases | 0 | DIRECT |
Formate/glycerate dehydrogenases, NAD-domain | 0 | DIRECT |
Poly(ADP-ribose) polymerase, C-terminal domain | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
beta-sandwich domain of Sec23/24 | 0 | DIRECT |
YicI N-terminal domain-like | 0 | DIRECT |
Ribosomal protein L31e | 0 | DIRECT |
MYND zinc finger | 0 | DIRECT |
NadC C-terminal domain-like | 0 | DIRECT |
GAPDH-like | 0 | DIRECT |
2Fe-2S ferredoxin-related | 0 | DIRECT |
Molybdenum cofactor-binding domain | 0 | DIRECT |
Ribosomal protein L13 | 0 | DIRECT |
Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
Kunitz (STI) inhibitors | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
CAT-like | 0 | DIRECT |
Plant lipoxigenases | 0 | DIRECT |
alpha-Amylases, C-terminal beta-sheet domain | 0 | DIRECT |
RplX-like | 0 | DIRECT |
Calnexin/calreticulin | 0 | DIRECT |
BSD domain | 0 | DIRECT |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
HEAT repeat | 0 | DIRECT |
Preprotein translocase SecE subunit | 0 | DIRECT |
Amidase signature (AS) enzymes | 0 | DIRECT |
RNA-polymerase beta | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
SerA intervening domain-like | 0 | DIRECT |
Rps19E-like | 0 | DIRECT |
UDP-glucose pyrophosphorylase | 0 | DIRECT |
LeuD-like | 0 | DIRECT |
Shikimate kinase (AroK) | 0 | DIRECT |
AF1104-like | 0 | DIRECT |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
Ribosomal protein S27e | 0 | DIRECT |
Neurolysin-like | 0 | DIRECT |
Sec63 C-terminal domain-like | 0 | DIRECT |
Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
Aminomethyltransferase folate-binding domain | 0 | DIRECT |
FKBP immunophilin/proline isomerase | 0 | DIRECT |
IF2B-like | 0 | DIRECT |
HD domain | 0 | DIRECT |
NifU C-terminal domain-like | 0 | DIRECT |
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | DIRECT |
Class I aldolase | 0 | DIRECT |
P-domain of calnexin/calreticulin | 0 | DIRECT |
Spermidine synthase | 0 | DIRECT |
RNase Z-like | 0 | DIRECT |
Rubredoxin | 0 | DIRECT |
GDI-like N domain | 0 | DIRECT |
IPP isomerase-like | 0 | DIRECT |
6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
Ribosomal proteins L24p and L21e | 0 | DIRECT |
beta-carbonic anhydrase, cab | 0 | DIRECT |
Smc hinge domain | 0 | DIRECT |
Ribosomal S5 protein, N-terminal domain | 0 | DIRECT |
Starch-binding domain | 0 | DIRECT |
Folylpolyglutamate synthetase | 0 | DIRECT |
Ribosomal protein S13 | 0 | DIRECT |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
EDF1-like | 0 | DIRECT |
AMPK-beta glycogen binding domain-like | 0 | DIRECT |
L23p | 0 | DIRECT |
Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
MPP-like | 0 | DIRECT |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
RraA-like | 0 | DIRECT |
Clc chloride channel | 0 | DIRECT |
LysM domain | 0 | DIRECT |
MSP-like | 0 | DIRECT |
HspBP1 domain | 0 | DIRECT |
Enolase N-terminal domain-like | 0 | DIRECT |
Sigma4 domain | 0 | DIRECT |
N-acetyl-l-glutamate kinase | 0 | DIRECT |
HMGL-like | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
gamma-carbonic anhydrase-like | 0 | DIRECT |
R3H domain | 0 | DIRECT |
Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
Diacylglycerol kinase-like | 0 | DIRECT |
Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
Aconitase iron-sulfur domain | 0 | DIRECT |
DJ-1/PfpI | 0 | DIRECT |
Allosteric chorismate mutase | 0 | DIRECT |
GAT domain | 0 | DIRECT |
CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
Sedlin (SEDL) | 0 | DIRECT |
MIF-related | 0 | DIRECT |
BphP N-terminal domain-like | 0 | DIRECT |
CoA-binding domain | 0 | DIRECT |
eIF1-like | 0 | DIRECT |
FAH | 0 | DIRECT |
Ribosomal protein L10-like | 0 | DIRECT |
WrbA-like | 0 | DIRECT |
N-type ATP pyrophosphatases | 0 | DIRECT |
Ribosomal protein L19 | 0 | DIRECT |
Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Formyltransferase | 0 | DIRECT |
Phosphoglucomutase, first 3 domains | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
Transducin (alpha subunit), insertion domain | 0 | DIRECT |
Prokaryotic ribosomal protein L17 | 0 | DIRECT |
Class-II DAHP synthetase | 0 | DIRECT |
CO dehydrogenase ISP C-domain like | 0 | DIRECT |
monodomain cytochrome c | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
Ribosomal protein L5 | 0 | DIRECT |
EF-G/eEF-2 domains III and V | 0 | DIRECT |
Ribosomal protein L37e | 0 | DIRECT |
PX domain | 0 | DIRECT |
Aspartokinase allosteric domain-like | 0 | DIRECT |
beta-Phosphoglucomutase-like | 0 | DIRECT |
Cu,Zn superoxide dismutase-like | 0 | DIRECT |
XPC-binding domain | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
NHL repeat | 0 | DIRECT |
Glycolipid transfer protein, GLTP | 0 | DIRECT |
Succinyl-CoA synthetase domains | 0 | DIRECT |
SufE-like | 0 | DIRECT |
Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
RibA-like | 0 | DIRECT |
Phosphoglycerate kinase | 0 | DIRECT |
PsbP-like | 0 | DIRECT |
Translational machinery components | 0 | DIRECT |
Ribosomal protein S15 | 0 | DIRECT |
Chromo domain | 0 | DIRECT |
Cytochrome b5 | 0 | DIRECT |
Myf domain | 0 | DIRECT |
SCOP term | FDR (all) | Annotation (direct or inherited) |
SH3-domain | 0 | Direct |
Trehalose-6-phosphate synthase, OtsA | 0 | Direct |
Peptidyl-tRNA hydrolase II | 0 | Direct |
RelA/SpoT domain | 0 | Direct |
Tail specific protease, catalytic domain | 0 | Direct |
PAPS reductase-like | 0 | Direct |
Phytochrome-specific domain | 0 | Direct |
Ran-binding domain | 0 | Direct |
ZZ domain | 0 | Direct |
Cytidylyltransferase | 0 | Direct |
Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
DNA repair glycosylase, 2 C-terminal domains | 0 | Direct |
AMPKBI-like | 0 | Direct |
Serine acetyltransferase | 0 | Direct |
Acyl-ACP thioesterase-like | 0 | Direct |
Ribosomal protein S10 | 0 | Direct |
Homoserine dehydrogenase-like | 0 | Direct |
Plus3 | 0 | Direct |
CO dehydrogenase flavoprotein N-terminal domain-like | 0 | Direct |
Histidine kinase | 0 | Direct |
HAT/Suf repeat | 0 | Direct |
C5 cytosine-specific DNA methylase, DCM | 0 | Direct |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
Tim10/DDP | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
RNase III catalytic domain-like | 0 | Direct |
DNA polymerase III clamp loader subunits, C-terminal domain | 0 | Direct |
ATP sulfurylase catalytic domain | 0 | Direct |
Formate/glycerate dehydrogenases, substrate-binding domain | 0 | Direct |
CAF1-like ribonuclease | 0 | Direct |
Ribosomal protein L30p/L7e | 0 | Direct |
Ribosomal protein L39e | 0 | Direct |
SOUL heme-binding protein | 0 | Direct |
Cyclophilin (peptidylprolyl isomerase) | 0 | Direct |
Ribosomal protein L4 | 0 | Direct |
Trunk domain of Sec23/24 | 0 | Direct |
(Glycosyl)asparaginase | 0 | Direct |
Ribosomal protein L1 | 0 | Direct |
Ribosomal protein S2 | 0 | Direct |
Lipoxigenase N-terminal domain | 0 | Direct |
Deoxycytidylate deaminase-like | 0 | Direct |
Ribosomal proteins L15p and L18e | 0 | Direct |
eIF5a N-terminal domain-like | 0 | Direct |
Peptide methionine sulfoxide reductase | 0 | Direct |
Pentapeptide repeats | 0 | Direct |
RWD domain | 0 | Direct |
D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
Methyl-CpG-binding domain, MBD | 0 | Direct |
PNP-oxidase like | 0 | Direct |
LEA14-like | 0 | Direct |
Clp protease, ClpP subunit | 0 | Direct |
Enolase | 0 | Direct |
Creatinase/aminopeptidase | 0 | Direct |
PDI-like | 0 | Direct |
RuBisCo LSMT catalytic domain | 0 | Direct |
Linker histone H1/H5 | 0 | Direct |
BolA-like | 0 | Direct |
Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
NagB-like | 0 | Direct |
Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
Oxygen-evolving enhancer protein 3, | 0 | Direct |
Release factor | 0 | Direct |
Heme-dependent catalases | 0 | Direct |
Reductases | 0 | Direct |
Ribosomal protein L29 (L29p) | 0 | Direct |
ATP sulfurylase N-terminal domain | 0 | Direct |
Sec63 N-terminal domain | 0 | Direct |
Dihydrodipicolinate reductase-like | 0 | Direct |
Acyl-CoA binding protein | 0 | Direct |
Thiolase-related | 0 | Direct |
S-adenosylmethionine synthetase | 0 | Direct |
Cdc48 N-terminal domain-like | 0 | Direct |
CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
Single-domain sulfurtransferase | 0 | Direct |
TAZ domain | 0 | Direct |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | Direct |
Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
5' nucleotidase-like | 0 | Direct |
LplA-like | 0 | Direct |
Peptidyl-tRNA hydrolase-like | 0 | Direct |
Methionine aminopeptidase, insert domain | 0 | Direct |
Ribosomal protein L19 (L19e) | 0 | Direct |
PCI domain (PINT motif) | 0 | Direct |
Plant transcriptional regulator PBF-2 | 0 | Direct |
Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
Clathrin coat assembly domain | 0 | Direct |
Plant stress-induced protein | 0 | Direct |
Ribosomal L11/L12e N-terminal domain | 0 | Direct |
Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
GABARAP-like | 0 | Direct |
Eps15 homology domain (EH domain) | 0 | Direct |
VHS domain | 0 | Direct |
G domain-linked domain | 0 | Direct |
Sec1/munc18-like (SM) proteins | 0 | Direct |
Casein kinase II beta subunit | 0 | Direct |
Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
Ribosomal protein L3 | 0 | Direct |
SelR domain | 0 | Direct |
Tryptophan biosynthesis enzymes | 0 | Direct |
Amine oxidase catalytic domain | 0 | Direct |
RNB domain-like | 0 | Direct |
Ribosomal protein L10e | 0 | Direct |
Bacterial exopeptidase dimerisation domain | 0 | Direct |
Band 7/SPFH domain | 0 | Direct |
Homocysteine S-methyltransferase | 0 | Direct |
PUA domain | 0 | Direct |
NadC N-terminal domain-like | 0 | Direct |
Pseudouridine synthase II TruB | 0 | Direct |
Choline kinase | 0 | Direct |
UBX domain | 0 | Direct |
HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | Direct |
RNA polymerase II subunit RBP4 (RpoF) | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
Ribosomal protein S6 | 0 | Direct |
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | Direct |
ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
HesB-like domain | 0 | Direct |
LON domain-like | 0 | Direct |
Gamma-glutamyl cyclotransferase-like | 0 | Direct |
Aminoacid dehydrogenases | 0 | Direct |
Formate/glycerate dehydrogenases, NAD-domain | 0 | Direct |
Poly(ADP-ribose) polymerase, C-terminal domain | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
Oxidoreductase molybdopterin-binding domain | 0 | Direct |
beta-sandwich domain of Sec23/24 | 0 | Direct |
YicI N-terminal domain-like | 0 | Direct |
Ribosomal protein L31e | 0 | Direct |
MYND zinc finger | 0 | Direct |
NadC C-terminal domain-like | 0 | Direct |
GAPDH-like | 0 | Direct |
2Fe-2S ferredoxin-related | 0 | Direct |
Molybdenum cofactor-binding domain | 0 | Direct |
Ribosomal protein L13 | 0 | Direct |
Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
Kunitz (STI) inhibitors | 0 | Direct |
Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
CAT-like | 0 | Direct |
Plant lipoxigenases | 0 | Direct |
alpha-Amylases, C-terminal beta-sheet domain | 0 | Direct |
RplX-like | 0 | Direct |
Calnexin/calreticulin | 0 | Direct |
BSD domain | 0 | Direct |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
HEAT repeat | 0 | Direct |
Preprotein translocase SecE subunit | 0 | Direct |
Amidase signature (AS) enzymes | 0 | Direct |
RNA-polymerase beta | 0 | Direct |
Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
SerA intervening domain-like | 0 | Direct |
Rps19E-like | 0 | Direct |
UDP-glucose pyrophosphorylase | 0 | Direct |
LeuD-like | 0 | Direct |
Shikimate kinase (AroK) | 0 | Direct |
AF1104-like | 0 | Direct |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
Ribosomal protein S27e | 0 | Direct |
Neurolysin-like | 0 | Direct |
Sec63 C-terminal domain-like | 0 | Direct |
Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
Aminomethyltransferase folate-binding domain | 0 | Direct |
FKBP immunophilin/proline isomerase | 0 | Direct |
IF2B-like | 0 | Direct |
HD domain | 0 | Direct |
NifU C-terminal domain-like | 0 | Direct |
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | Direct |
Class I aldolase | 0 | Direct |
P-domain of calnexin/calreticulin | 0 | Direct |
Spermidine synthase | 0 | Direct |
RNase Z-like | 0 | Direct |
Rubredoxin | 0 | Direct |
GDI-like N domain | 0 | Direct |
IPP isomerase-like | 0 | Direct |
6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | Direct |
Ribosomal proteins L24p and L21e | 0 | Direct |
beta-carbonic anhydrase, cab | 0 | Direct |
Smc hinge domain | 0 | Direct |
Ribosomal S5 protein, N-terminal domain | 0 | Direct |
Starch-binding domain | 0 | Direct |
Folylpolyglutamate synthetase | 0 | Direct |
Ribosomal protein S13 | 0 | Direct |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
EDF1-like | 0 | Direct |
AMPK-beta glycogen binding domain-like | 0 | Direct |
L23p | 0 | Direct |
Prokaryotic type I DNA topoisomerase | 0 | Direct |
MPP-like | 0 | Direct |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
RraA-like | 0 | Direct |
Clc chloride channel | 0 | Direct |
LysM domain | 0 | Direct |
MSP-like | 0 | Direct |
HspBP1 domain | 0 | Direct |
Enolase N-terminal domain-like | 0 | Direct |
Sigma4 domain | 0 | Direct |
N-acetyl-l-glutamate kinase | 0 | Direct |
HMGL-like | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
gamma-carbonic anhydrase-like | 0 | Direct |
R3H domain | 0 | Direct |
Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
Diacylglycerol kinase-like | 0 | Direct |
Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
Nucleoside diphosphate kinase, NDK | 0 | Direct |
Aconitase iron-sulfur domain | 0 | Direct |
DJ-1/PfpI | 0 | Direct |
Allosteric chorismate mutase | 0 | Direct |
GAT domain | 0 | Direct |
CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
Sedlin (SEDL) | 0 | Direct |
MIF-related | 0 | Direct |
BphP N-terminal domain-like | 0 | Direct |
CoA-binding domain | 0 | Direct |
eIF1-like | 0 | Direct |
FAH | 0 | Direct |
Ribosomal protein L10-like | 0 | Direct |
WrbA-like | 0 | Direct |
N-type ATP pyrophosphatases | 0 | Direct |
Ribosomal protein L19 | 0 | Direct |
Head domain of nucleotide exchange factor GrpE | 0 | Direct |
Formyltransferase | 0 | Direct |
Phosphoglucomutase, first 3 domains | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
Phosphoglucomutase, C-terminal domain | 0 | Direct |
Transducin (alpha subunit), insertion domain | 0 | Direct |
Prokaryotic ribosomal protein L17 | 0 | Direct |
Class-II DAHP synthetase | 0 | Direct |
CO dehydrogenase ISP C-domain like | 0 | Direct |
monodomain cytochrome c | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
Ribosomal protein L5 | 0 | Direct |
EF-G/eEF-2 domains III and V | 0 | Direct |
Ribosomal protein L37e | 0 | Direct |
PX domain | 0 | Direct |
Aspartokinase allosteric domain-like | 0 | Direct |
beta-Phosphoglucomutase-like | 0 | Direct |
Cu,Zn superoxide dismutase-like | 0 | Direct |
XPC-binding domain | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
NHL repeat | 0 | Direct |
Glycolipid transfer protein, GLTP | 0 | Direct |
Succinyl-CoA synthetase domains | 0 | Direct |
SufE-like | 0 | Direct |
Magnesium transport protein CorA, transmembrane region | 0 | Direct |
RibA-like | 0 | Direct |
Phosphoglycerate kinase | 0 | Direct |
PsbP-like | 0 | Direct |
Translational machinery components | 0 | Direct |
Ribosomal protein S15 | 0 | Direct |
Chromo domain | 0 | Direct |
Cytochrome b5 | 0 | Direct |
Myf domain | 0 | Direct |
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Supra-domain (including individual superfamily)
(show details)
Supra-domains annotated to this AP term (SPAP level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
Homocysteine S-methyltransferase | 0 | DIRECT |
Sec1/munc18-like (SM) proteins | 0 | DIRECT |
Ribosomal protein L31e | 0 | DIRECT |
Ribosomal protein L13 | 0 | DIRECT |
EF-G C-terminal domain-like | 0 | DIRECT |
Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
Ribosomal protein L30p/L7e | 0 | DIRECT |
FKBP-like | 0 | DIRECT |
Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
LigT-like | 0 | DIRECT |
Enolase N-terminal domain-like | 0 | DIRECT |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
Seven-hairpin glycosidases | 0 | DIRECT |
Ribosomal protein L39e | 0 | DIRECT |
Succinyl-CoA synthetase domains | 0 | DIRECT |
Ribosomal protein L1 | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
Acyl-CoA binding protein | 0 | DIRECT |
ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
Phosphoglucomutase, first 3 domains | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
Ribosomal protein L29 (L29p) | 0 | DIRECT |
Mss4-like | 0 | DIRECT |
Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
Glycolipid transfer protein, GLTP | 0 | DIRECT |
AMPKBI-like | 0 | DIRECT |
FAH | 0 | DIRECT |
Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
L28p-like | 0 | DIRECT |
Release factor | 0 | DIRECT |
RplX-like | 0 | DIRECT |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
Carbon-nitrogen hydrolase | 0 | DIRECT |
PapD-like | 0 | DIRECT |
LuxS/MPP-like metallohydrolase | 0 | DIRECT |
eIF1-like | 0 | DIRECT |
Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
EGF/Laminin | 0 | DIRECT |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
Ribosomal proteins L15p and L18e | 0 | DIRECT |
Ribosomal protein L25-like | 0 | DIRECT |
Serine metabolism enzymes domain | 0 | DIRECT |
S13-like H2TH domain | 0 | DIRECT |
Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
RNase III domain-like | 0 | DIRECT |
Probable bacterial effector-binding domain | 0 | DIRECT |
Electron transport accessory proteins | 0 | DIRECT |
P-domain of calnexin/calreticulin | 0 | DIRECT |
Metallo-dependent hydrolases | 0 | DIRECT |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Preprotein translocase SecE subunit | 0 | DIRECT |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
CO dehydrogenase ISP C-domain like | 0 | DIRECT |
Prokaryotic ribosomal protein L17 | 0 | DIRECT |
S15/NS1 RNA-binding domain | 0 | DIRECT |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
RL5-like | 0 | DIRECT |
NHL repeat | 0 | DIRECT |
ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
Lipocalins | 0 | DIRECT |
Ribosomal protein S6 | 0 | DIRECT |
Phosphoglycerate kinase | 0 | DIRECT |
Enolase C-terminal domain-like | 0 | DIRECT |
Amidase signature (AS) enzymes | 0 | DIRECT |
PLP-binding barrel | 0 | DIRECT |
Folate-binding domain | 0 | DIRECT |
Casein kinase II beta subunit | 0 | DIRECT |
Chorismate mutase II | 0 | DIRECT |
BolA-like | 0 | DIRECT |
Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
CYTH-like phosphatases | 0 | DIRECT |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
Formyltransferase | 0 | DIRECT |
LysM domain | 0 | DIRECT |
GINS helical bundle-like | 0 | DIRECT |
LeuD/IlvD-like | 0 | DIRECT |
tRNA-binding arm | 0 | DIRECT |
Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
Cytochrome c | 0 | DIRECT |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
Dimeric alpha+beta barrel | 0 | DIRECT |
CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
Tim10-like | 0 | DIRECT |
SIS domain | 0 | DIRECT |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
beta-carbonic anhydrase, cab | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
Endosomal sorting complex assembly domain | 0 | DIRECT |
Peptidyl-tRNA hydrolase II | 0 | DIRECT |
SH3-domain | 0 | DIRECT |
TAZ domain | 0 | DIRECT |
NagB/RpiA/CoA transferase-like | 0 | DIRECT |
Creatinase/prolidase N-terminal domain | 0 | DIRECT |
Tautomerase/MIF | 0 | DIRECT |
Pentapeptide repeat-like | 0 | DIRECT |
Ribosomal protein L4 | 0 | DIRECT |
YrdC/RibB | 0 | DIRECT |
GlnB-like | 0 | DIRECT |
R3H domain | 0 | DIRECT |
PX domain | 0 | DIRECT |
Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
XPC-binding domain | 0 | DIRECT |
Aconitase iron-sulfur domain | 0 | DIRECT |
TATA-box binding protein-like | 0 | DIRECT |
Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
Ribosomal protein S2 | 0 | DIRECT |
Rubredoxin-like | 0 | DIRECT |
Ribosomal protein L19 (L19e) | 0 | DIRECT |
Cyclophilin-like | 0 | DIRECT |
beta-sandwich domain of Sec23/24 | 0 | DIRECT |
Molybdenum cofactor-binding domain | 0 | DIRECT |
S-adenosylmethionine synthetase | 0 | DIRECT |
Lipoxigenase | 0 | DIRECT |
Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Heme-dependent catalase-like | 0 | DIRECT |
lambda repressor-like DNA-binding domains | 0 | DIRECT |
Clc chloride channel | 0 | DIRECT |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
AF1104-like | 0 | DIRECT |
Amine oxidase catalytic domain | 0 | DIRECT |
CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
RraA-like | 0 | DIRECT |
Creatinase/aminopeptidase | 0 | DIRECT |
Mog1p/PsbP-like | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
Ribosomal protein S10 | 0 | DIRECT |
Cu,Zn superoxide dismutase-like | 0 | DIRECT |
BSD domain-like | 0 | DIRECT |
Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
RibA-like | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
Chelatase | 0 | DIRECT |
HesB-like domain | 0 | DIRECT |
Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
Peptide methionine sulfoxide reductase | 0 | DIRECT |
Transducin (alpha subunit), insertion domain | 0 | DIRECT |
ACT-like | 0.0001409 | DIRECT |
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.0002755 | DIRECT |
NAD(P)-binding Rossmann-fold domains | 0.0004478 | DIRECT |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0005382 | DIRECT |
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
Homocysteine S-methyltransferase | 0 | Direct |
Sec1/munc18-like (SM) proteins | 0 | Direct |
Ribosomal protein L31e | 0 | Direct |
Ribosomal protein L13 | 0 | Direct |
EF-G C-terminal domain-like | 0 | Direct |
Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
Ribosomal protein L30p/L7e | 0 | Direct |
FKBP-like | 0 | Direct |
Nucleoside diphosphate kinase, NDK | 0 | Direct |
LigT-like | 0 | Direct |
Enolase N-terminal domain-like | 0 | Direct |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
Seven-hairpin glycosidases | 0 | Direct |
Ribosomal protein L39e | 0 | Direct |
Succinyl-CoA synthetase domains | 0 | Direct |
Ribosomal protein L1 | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
Acyl-CoA binding protein | 0 | Direct |
ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
Phosphoglucomutase, first 3 domains | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
Ribosomal protein L29 (L29p) | 0 | Direct |
Mss4-like | 0 | Direct |
Gamma-glutamyl cyclotransferase-like | 0 | Direct |
Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
Glycolipid transfer protein, GLTP | 0 | Direct |
AMPKBI-like | 0 | Direct |
FAH | 0 | Direct |
Phosphoglucomutase, C-terminal domain | 0 | Direct |
L28p-like | 0 | Direct |
Release factor | 0 | Direct |
RplX-like | 0 | Direct |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
Carbon-nitrogen hydrolase | 0 | Direct |
PapD-like | 0 | Direct |
LuxS/MPP-like metallohydrolase | 0 | Direct |
eIF1-like | 0 | Direct |
Prokaryotic type I DNA topoisomerase | 0 | Direct |
EGF/Laminin | 0 | Direct |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
Ribosomal proteins L15p and L18e | 0 | Direct |
Ribosomal protein L25-like | 0 | Direct |
Serine metabolism enzymes domain | 0 | Direct |
S13-like H2TH domain | 0 | Direct |
Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
Rhodanese/Cell cycle control phosphatase | 0 | Direct |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
RNase III domain-like | 0 | Direct |
Probable bacterial effector-binding domain | 0 | Direct |
Electron transport accessory proteins | 0 | Direct |
P-domain of calnexin/calreticulin | 0 | Direct |
Metallo-dependent hydrolases | 0 | Direct |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
Preprotein translocase SecE subunit | 0 | Direct |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
CO dehydrogenase ISP C-domain like | 0 | Direct |
Prokaryotic ribosomal protein L17 | 0 | Direct |
S15/NS1 RNA-binding domain | 0 | Direct |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
RL5-like | 0 | Direct |
NHL repeat | 0 | Direct |
ssDNA-binding transcriptional regulator domain | 0 | Direct |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
Lipocalins | 0 | Direct |
Ribosomal protein S6 | 0 | Direct |
Phosphoglycerate kinase | 0 | Direct |
Enolase C-terminal domain-like | 0 | Direct |
Amidase signature (AS) enzymes | 0 | Direct |
PLP-binding barrel | 0 | Direct |
Folate-binding domain | 0 | Direct |
Casein kinase II beta subunit | 0 | Direct |
Chorismate mutase II | 0 | Direct |
BolA-like | 0 | Direct |
Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
CYTH-like phosphatases | 0 | Direct |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
Formyltransferase | 0 | Direct |
LysM domain | 0 | Direct |
GINS helical bundle-like | 0 | Direct |
LeuD/IlvD-like | 0 | Direct |
tRNA-binding arm | 0 | Direct |
Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
Cytochrome c | 0 | Direct |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
Oxidoreductase molybdopterin-binding domain | 0 | Direct |
Dimeric alpha+beta barrel | 0 | Direct |
CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
Tim10-like | 0 | Direct |
SIS domain | 0 | Direct |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
beta-carbonic anhydrase, cab | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
Oxygen-evolving enhancer protein 3, | 0 | Direct |
Magnesium transport protein CorA, transmembrane region | 0 | Direct |
Endosomal sorting complex assembly domain | 0 | Direct |
Peptidyl-tRNA hydrolase II | 0 | Direct |
SH3-domain | 0 | Direct |
TAZ domain | 0 | Direct |
NagB/RpiA/CoA transferase-like | 0 | Direct |
Creatinase/prolidase N-terminal domain | 0 | Direct |
Tautomerase/MIF | 0 | Direct |
Pentapeptide repeat-like | 0 | Direct |
Ribosomal protein L4 | 0 | Direct |
YrdC/RibB | 0 | Direct |
GlnB-like | 0 | Direct |
R3H domain | 0 | Direct |
PX domain | 0 | Direct |
Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
XPC-binding domain | 0 | Direct |
Aconitase iron-sulfur domain | 0 | Direct |
TATA-box binding protein-like | 0 | Direct |
Bacterial exopeptidase dimerisation domain | 0 | Direct |
Ribosomal protein S2 | 0 | Direct |
Rubredoxin-like | 0 | Direct |
Ribosomal protein L19 (L19e) | 0 | Direct |
Cyclophilin-like | 0 | Direct |
beta-sandwich domain of Sec23/24 | 0 | Direct |
Molybdenum cofactor-binding domain | 0 | Direct |
S-adenosylmethionine synthetase | 0 | Direct |
Lipoxigenase | 0 | Direct |
Head domain of nucleotide exchange factor GrpE | 0 | Direct |
Heme-dependent catalase-like | 0 | Direct |
lambda repressor-like DNA-binding domains | 0 | Direct |
Clc chloride channel | 0 | Direct |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
AF1104-like | 0 | Direct |
Amine oxidase catalytic domain | 0 | Direct |
CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
RraA-like | 0 | Direct |
Creatinase/aminopeptidase | 0 | Direct |
Mog1p/PsbP-like | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
Ribosomal protein S10 | 0 | Direct |
Cu,Zn superoxide dismutase-like | 0 | Direct |
BSD domain-like | 0 | Direct |
Peptidyl-tRNA hydrolase-like | 0 | Direct |
RibA-like | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
Ribosomal L11/L12e N-terminal domain | 0 | Direct |
Chelatase | 0 | Direct |
HesB-like domain | 0 | Direct |
Expressed protein At2g23090/F21P24.15 | 0 | Direct |
Composite domain of metallo-dependent hydrolases | 0 | Direct |
Peptide methionine sulfoxide reductase | 0 | Direct |
Transducin (alpha subunit), insertion domain | 0 | Direct |
ACT-like | 0.0001409 | Direct |
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.0002755 | Direct |
NAD(P)-binding Rossmann-fold domains | 0.0004478 | Direct |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0005382 | Direct |
(show details)
Supra-domains annotated to this AP term (SPAP level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52317,52317 52317 - Class I glutamine amidotransferase-like 52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
55821,142695 55821 - YrdC/RibB 142695 - RibA-like | 0 | DIRECT |
55781,55781 55781 - GAF domain-like 55781 - GAF domain-like | 0 | DIRECT |
158702,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50022,55961 50022 - ISP domain 55961 - Bet v1-like | 0 | DIRECT |
54768,54211 54768 - dsRNA-binding domain-like 54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
53756,56784 53756 - UDP-Glycosyltransferase/glycogen phosphorylase 56784 - HAD-like | 0 | DIRECT |
48403,52540 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50447,54980 50447 - Translation proteins 54980 - EF-G C-terminal domain-like | 0 | DIRECT |
100950,75445 100950 - NagB/RpiA/CoA transferase-like 75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
47005,52777 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | DIRECT |
48452,54277 48452 - TPR-like 54277 - CAD & PB1 domains | 0 | DIRECT |
51338,51556 51338 - Composite domain of metallo-dependent hydrolases 51556 - Metallo-dependent hydrolases | 0 | DIRECT |
52540,52058 52540 - P-loop containing nucleoside triphosphate hydrolases 52058 - L domain-like | 0 | DIRECT |
53187,55031 53187 - Zn-dependent exopeptidases 55031 - Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
117916,117916 117916 - Fe-S cluster assembly (FSCA) domain-like 117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
55920,46785 55920 - Creatinase/aminopeptidase 46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
49899,63887 49899 - Concanavalin A-like lectins/glucanases 63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
47473,52540 47473 - EF-hand 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50249,55681 50249 - Nucleic acid-binding proteins 55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
54980,54980 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | DIRECT |
53732,52016 53732 - Aconitase iron-sulfur domain 52016 - LeuD/IlvD-like | 0 | DIRECT |
54585,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
51905,55424 51905 - FAD/NAD(P)-binding domain 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
54747,46906 54747 - Ribosomal L11/L12e N-terminal domain 46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
82171,53474 82171 - DPP6 N-terminal domain-like 53474 - alpha/beta-Hydrolases | 0 | DIRECT |
56059,52210 56059 - Glutathione synthetase ATP-binding domain-like 52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
55785,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like | 0 | DIRECT |
55781,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
56524,81296 56524 - Oxidoreductase molybdopterin-binding domain 81296 - E set domains | 0 | DIRECT |
55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
57850,54928 57850 - RING/U-box 54928 - RNA-binding domain, RBD | 0 | DIRECT |
52283,51735 52283 - Formate/glycerate dehydrogenase catalytic domain-like 51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
53300,81995 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
54416,54416 54416 - Amine oxidase N-terminal region 54416 - Amine oxidase N-terminal region | 0 | DIRECT |
55874,52172 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | DIRECT |
47895,52540 47895 - Transducin (alpha subunit), insertion domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,90002 52540 - P-loop containing nucleoside triphosphate hydrolases 90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
81383,54518 81383 - F-box domain 54518 - Tubby C-terminal domain-like | 0 | DIRECT |
54292,47741 54292 - 2Fe-2S ferredoxin-like 47741 - CO dehydrogenase ISP C-domain like | 0 | DIRECT |
81995,81811 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | DIRECT |
52402,52833 52402 - Adenine nucleotide alpha hydrolases-like 52833 - Thioredoxin-like | 0 | DIRECT |
82919,53300 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | DIRECT |
81995,82919 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
81811,82754 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
50156,52096 50156 - PDZ domain-like 52096 - ClpP/crotonase | 0 | DIRECT |
69065,54768 69065 - RNase III domain-like 54768 - dsRNA-binding domain-like | 0 | DIRECT |
53223,51735 53223 - Aminoacid dehydrogenase-like, N-terminal domain 51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
64356,49447 64356 - SNARE-like 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
46785,158702 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
50104,50249 50104 - Translation proteins SH3-like domain 50249 - Nucleic acid-binding proteins | 0 | DIRECT |
53738,55957 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
54416,49998 54416 - Amine oxidase N-terminal region 49998 - Amine oxidase catalytic domain | 0 | DIRECT |
102848,54236 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain 54236 - Ubiquitin-like | 0 | DIRECT |
101238,46934 101238 - XPC-binding domain 46934 - UBA-like | 0 | DIRECT |
53850,55021 53850 - Periplasmic binding protein-like II 55021 - ACT-like | 0 | DIRECT |
57850,57933 57850 - RING/U-box 57933 - TAZ domain | 0 | DIRECT |
51230,47005 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
54534,54534 54534 - FKBP-like 54534 - FKBP-like | 0 | DIRECT |
103481,103481 103481 - Multidrug resistance efflux transporter EmrE 103481 - Multidrug resistance efflux transporter EmrE | 0 | DIRECT |
50249,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
58014,51064 58014 - Coiled-coil domain of nucleotide exchange factor GrpE 51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
81324,81324 81324 - Voltage-gated potassium channels 81324 - Voltage-gated potassium channels | 0 | DIRECT |
56235,52402 56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases) 52402 - Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
53383,53383 53383 - PLP-dependent transferases 53383 - PLP-dependent transferases | 0 | DIRECT |
54826,51604 54826 - Enolase N-terminal domain-like 51604 - Enolase C-terminal domain-like | 0 | DIRECT |
53300,57850 53300 - vWA-like 57850 - RING/U-box | 0 | DIRECT |
55021,56112 55021 - ACT-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
158702,81296 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | DIRECT |
48371,50978 48371 - ARM repeat 50978 - WD40 repeat-like | 0 | DIRECT |
52087,101576 52087 - CRAL/TRIO domain 101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
158639,63748 158639 - ENT-like 63748 - Tudor/PWWP/MBT | 0 | DIRECT |
53633,55021 53633 - Carbamate kinase-like 55021 - ACT-like | 0 | DIRECT |
101690,69065 101690 - PAZ domain 69065 - RNase III domain-like | 0 | DIRECT |
109604,81301 109604 - HD-domain/PDEase-like 81301 - Nucleotidyltransferase | 0 | DIRECT |
51735,143548 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | DIRECT |
54909,54909 54909 - Dimeric alpha+beta barrel 54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
47473,103506 47473 - EF-hand 103506 - Mitochondrial carrier | 0 | DIRECT |
55447,54665 55447 - CO dehydrogenase flavoprotein C-terminal domain-like 54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
56176,55447 56176 - FAD-binding/transporter-associated domain-like 55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
88697,52374 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | DIRECT |
88659,88659 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
49723,48484 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain) 48484 - Lipoxigenase | 0 | DIRECT |
47741,56176 47741 - CO dehydrogenase ISP C-domain like 56176 - FAD-binding/transporter-associated domain-like | 0 | DIRECT |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | DIRECT |
54665,56003 54665 - CO dehydrogenase molybdoprotein N-domain-like 56003 - Molybdenum cofactor-binding domain | 0 | DIRECT |
54534,48452 54534 - FKBP-like 48452 - TPR-like | 0 | DIRECT |
54160,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48403,57850 48403 - Ankyrin repeat 57850 - RING/U-box | 0 | DIRECT |
47384,55874 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
48179,52413 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
54637,54637 54637 - Thioesterase/thiol ester dehydrase-isomerase 54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
52540,48403 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | DIRECT |
81296,51445 81296 - E set domains 51445 - (Trans)glycosidases | 0 | DIRECT |
88946,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
82199,81822 82199 - SET domain 81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
52172,52172 52172 - CheY-like 52172 - CheY-like | 0 | DIRECT |
55785,55785 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
54160,54160 54160 - Chromo domain-like 54160 - Chromo domain-like | 0 | DIRECT |
81296,52540 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
63411,63411 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
143548,55021 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | DIRECT |
49599,49599 49599 - TRAF domain-like 49599 - TRAF domain-like | 0 | DIRECT |
51735,55347 51735 - NAD(P)-binding Rossmann-fold domains 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.0002755 | DIRECT |
51735,48179 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0007521 | DIRECT |
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52317,52317 52317 - Class I glutamine amidotransferase-like 52317 - Class I glutamine amidotransferase-like | 0 | Direct |
55821,142695 55821 - YrdC/RibB 142695 - RibA-like | 0 | Direct |
55781,55781 55781 - GAF domain-like 55781 - GAF domain-like | 0 | Direct |
158702,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50022,55961 50022 - ISP domain 55961 - Bet v1-like | 0 | Direct |
54768,54211 54768 - dsRNA-binding domain-like 54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
53756,56784 53756 - UDP-Glycosyltransferase/glycogen phosphorylase 56784 - HAD-like | 0 | Direct |
48403,52540 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50447,54980 50447 - Translation proteins 54980 - EF-G C-terminal domain-like | 0 | Direct |
100950,75445 100950 - NagB/RpiA/CoA transferase-like 75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
47005,52777 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | Direct |
48452,54277 48452 - TPR-like 54277 - CAD & PB1 domains | 0 | Direct |
51338,51556 51338 - Composite domain of metallo-dependent hydrolases 51556 - Metallo-dependent hydrolases | 0 | Direct |
52540,52058 52540 - P-loop containing nucleoside triphosphate hydrolases 52058 - L domain-like | 0 | Direct |
53187,55031 53187 - Zn-dependent exopeptidases 55031 - Bacterial exopeptidase dimerisation domain | 0 | Direct |
117916,117916 117916 - Fe-S cluster assembly (FSCA) domain-like 117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
55920,46785 55920 - Creatinase/aminopeptidase 46785 - "Winged helix" DNA-binding domain | 0 | Direct |
49899,63887 49899 - Concanavalin A-like lectins/glucanases 63887 - P-domain of calnexin/calreticulin | 0 | Direct |
47473,52540 47473 - EF-hand 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50249,55681 50249 - Nucleic acid-binding proteins 55681 - Class II aaRS and biotin synthetases | 0 | Direct |
54980,54980 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | Direct |
53732,52016 53732 - Aconitase iron-sulfur domain 52016 - LeuD/IlvD-like | 0 | Direct |
54585,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
51905,55424 51905 - FAD/NAD(P)-binding domain 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
54747,46906 54747 - Ribosomal L11/L12e N-terminal domain 46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
82171,53474 82171 - DPP6 N-terminal domain-like 53474 - alpha/beta-Hydrolases | 0 | Direct |
56059,52210 56059 - Glutathione synthetase ATP-binding domain-like 52210 - Succinyl-CoA synthetase domains | 0 | Direct |
55785,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like | 0 | Direct |
55781,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
56524,81296 56524 - Oxidoreductase molybdopterin-binding domain 81296 - E set domains | 0 | Direct |
55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | Direct |
57850,54928 57850 - RING/U-box 54928 - RNA-binding domain, RBD | 0 | Direct |
52283,51735 52283 - Formate/glycerate dehydrogenase catalytic domain-like 51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
53300,81995 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
54416,54416 54416 - Amine oxidase N-terminal region 54416 - Amine oxidase N-terminal region | 0 | Direct |
55874,52172 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | Direct |
47895,52540 47895 - Transducin (alpha subunit), insertion domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,90002 52540 - P-loop containing nucleoside triphosphate hydrolases 90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
81383,54518 81383 - F-box domain 54518 - Tubby C-terminal domain-like | 0 | Direct |
54292,47741 54292 - 2Fe-2S ferredoxin-like 47741 - CO dehydrogenase ISP C-domain like | 0 | Direct |
81995,81811 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | Direct |
52402,52833 52402 - Adenine nucleotide alpha hydrolases-like 52833 - Thioredoxin-like | 0 | Direct |
82919,53300 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | Direct |
81995,82919 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
81811,82754 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
50156,52096 50156 - PDZ domain-like 52096 - ClpP/crotonase | 0 | Direct |
69065,54768 69065 - RNase III domain-like 54768 - dsRNA-binding domain-like | 0 | Direct |
53223,51735 53223 - Aminoacid dehydrogenase-like, N-terminal domain 51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
64356,49447 64356 - SNARE-like 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
46785,158702 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | Direct |
50104,50249 50104 - Translation proteins SH3-like domain 50249 - Nucleic acid-binding proteins | 0 | Direct |
53738,55957 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
54416,49998 54416 - Amine oxidase N-terminal region 49998 - Amine oxidase catalytic domain | 0 | Direct |
102848,54236 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain 54236 - Ubiquitin-like | 0 | Direct |
101238,46934 101238 - XPC-binding domain 46934 - UBA-like | 0 | Direct |
53850,55021 53850 - Periplasmic binding protein-like II 55021 - ACT-like | 0 | Direct |
57850,57933 57850 - RING/U-box 57933 - TAZ domain | 0 | Direct |
51230,47005 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
54534,54534 54534 - FKBP-like 54534 - FKBP-like | 0 | Direct |
103481,103481 103481 - Multidrug resistance efflux transporter EmrE 103481 - Multidrug resistance efflux transporter EmrE | 0 | Direct |
50249,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
58014,51064 58014 - Coiled-coil domain of nucleotide exchange factor GrpE 51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
81324,81324 81324 - Voltage-gated potassium channels 81324 - Voltage-gated potassium channels | 0 | Direct |
56235,52402 56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases) 52402 - Adenine nucleotide alpha hydrolases-like | 0 | Direct |
53383,53383 53383 - PLP-dependent transferases 53383 - PLP-dependent transferases | 0 | Direct |
54826,51604 54826 - Enolase N-terminal domain-like 51604 - Enolase C-terminal domain-like | 0 | Direct |
53300,57850 53300 - vWA-like 57850 - RING/U-box | 0 | Direct |
55021,56112 55021 - ACT-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
158702,81296 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | Direct |
48371,50978 48371 - ARM repeat 50978 - WD40 repeat-like | 0 | Direct |
52087,101576 52087 - CRAL/TRIO domain 101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
158639,63748 158639 - ENT-like 63748 - Tudor/PWWP/MBT | 0 | Direct |
53633,55021 53633 - Carbamate kinase-like 55021 - ACT-like | 0 | Direct |
101690,69065 101690 - PAZ domain 69065 - RNase III domain-like | 0 | Direct |
109604,81301 109604 - HD-domain/PDEase-like 81301 - Nucleotidyltransferase | 0 | Direct |
51735,143548 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | Direct |
54909,54909 54909 - Dimeric alpha+beta barrel 54909 - Dimeric alpha+beta barrel | 0 | Direct |
47473,103506 47473 - EF-hand 103506 - Mitochondrial carrier | 0 | Direct |
55447,54665 55447 - CO dehydrogenase flavoprotein C-terminal domain-like 54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
56176,55447 56176 - FAD-binding/transporter-associated domain-like 55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
88697,52374 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | Direct |
88659,88659 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
49723,48484 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain) 48484 - Lipoxigenase | 0 | Direct |
47741,56176 47741 - CO dehydrogenase ISP C-domain like 56176 - FAD-binding/transporter-associated domain-like | 0 | Direct |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | Direct |
54665,56003 54665 - CO dehydrogenase molybdoprotein N-domain-like 56003 - Molybdenum cofactor-binding domain | 0 | Direct |
54534,48452 54534 - FKBP-like 48452 - TPR-like | 0 | Direct |
54160,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48403,57850 48403 - Ankyrin repeat 57850 - RING/U-box | 0 | Direct |
47384,55874 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
48179,52413 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
54637,54637 54637 - Thioesterase/thiol ester dehydrase-isomerase 54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
52540,48403 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | Direct |
81296,51445 81296 - E set domains 51445 - (Trans)glycosidases | 0 | Direct |
88946,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
82199,81822 82199 - SET domain 81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
52172,52172 52172 - CheY-like 52172 - CheY-like | 0 | Direct |
55785,55785 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
54160,54160 54160 - Chromo domain-like 54160 - Chromo domain-like | 0 | Direct |
81296,52540 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
63411,63411 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
143548,55021 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | Direct |
49599,49599 49599 - TRAF domain-like 49599 - TRAF domain-like | 0 | Direct |
51735,55347 51735 - NAD(P)-binding Rossmann-fold domains 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.0002755 | Direct |
51735,48179 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0007521 | Direct |
(show details)
Supra-domains annotated to this AP term (SPAP level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
53738,53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
81296,51445,51011 81296 - E set domains 51445 - (Trans)glycosidases 51011 - Glycosyl hydrolase domain | 0 | DIRECT |
52540,50447,54980 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins 54980 - EF-G C-terminal domain-like | 0 | DIRECT |
51735,143548,55021 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | DIRECT |
54160,52540,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
63411,63411,63411 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
55973,55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
81296,52540,48403 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | DIRECT |
53633,55021,55021 53633 - Carbamate kinase-like 55021 - ACT-like 55021 - ACT-like | 0 | DIRECT |
81995,81811,82754 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
50692,54585,52540 50692 - ADC-like 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55447,54665,56003 55447 - CO dehydrogenase flavoprotein C-terminal domain-like 54665 - CO dehydrogenase molybdoprotein N-domain-like 56003 - Molybdenum cofactor-binding domain | 0 | DIRECT |
54416,54416,49998 54416 - Amine oxidase N-terminal region 54416 - Amine oxidase N-terminal region 49998 - Amine oxidase catalytic domain | 0 | DIRECT |
55785,55781,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like 55781 - GAF domain-like | 0 | DIRECT |
55781,55781,55785 55781 - GAF domain-like 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
54292,47741,56176 54292 - 2Fe-2S ferredoxin-like 47741 - CO dehydrogenase ISP C-domain like 56176 - FAD-binding/transporter-associated domain-like | 0 | DIRECT |
47741,56176,55447 47741 - CO dehydrogenase ISP C-domain like 56176 - FAD-binding/transporter-associated domain-like 55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
52540,46785,158702 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
158702,52540,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52833,52833,52833 52833 - Thioredoxin-like 52833 - Thioredoxin-like 52833 - Thioredoxin-like | 0 | DIRECT |
54534,54534,54534 54534 - FKBP-like 54534 - FKBP-like 54534 - FKBP-like | 0 | DIRECT |
88946,88659,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
57850,57850,57933 57850 - RING/U-box 57850 - RING/U-box 57933 - TAZ domain | 0 | DIRECT |
52283,51735,143548 52283 - Formate/glycerate dehydrogenase catalytic domain-like 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | DIRECT |
50249,57756,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
46785,158702,52540 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52047,52058,56112 52047 - RNI-like 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
54160,54160,52540 54160 - Chromo domain-like 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55781,47384,55874 55781 - GAF domain-like 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
53738,53738,55957 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
55781,55785,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
56176,55447,54665 56176 - FAD-binding/transporter-associated domain-like 55447 - CO dehydrogenase flavoprotein C-terminal domain-like 54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
52540,52540,46785 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
53300,81995,81811 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | DIRECT |
81995,82919,53300 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | DIRECT |
50447,54980,54980 50447 - Translation proteins 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | DIRECT |
47384,55874,52172 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | DIRECT |
46938,52087,101576 46938 - CRAL/TRIO N-terminal domain 52087 - CRAL/TRIO domain 101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
51735,48179,52413 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
46785,158702,81296 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | DIRECT |
54585,52540,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
82919,53300,81995 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
90209,90209,90209 90209 - Ran binding protein zinc finger-like 90209 - Ran binding protein zinc finger-like 90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
54534,54534,48452 54534 - FKBP-like 54534 - FKBP-like 48452 - TPR-like | 0 | DIRECT |
51230,47005,52777 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | DIRECT |
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
53738,53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
81296,51445,51011 81296 - E set domains 51445 - (Trans)glycosidases 51011 - Glycosyl hydrolase domain | 0 | Direct |
52540,50447,54980 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins 54980 - EF-G C-terminal domain-like | 0 | Direct |
51735,143548,55021 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | Direct |
54160,52540,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
63411,63411,63411 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
55973,55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | Direct |
81296,52540,48403 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | Direct |
53633,55021,55021 53633 - Carbamate kinase-like 55021 - ACT-like 55021 - ACT-like | 0 | Direct |
81995,81811,82754 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
50692,54585,52540 50692 - ADC-like 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55447,54665,56003 55447 - CO dehydrogenase flavoprotein C-terminal domain-like 54665 - CO dehydrogenase molybdoprotein N-domain-like 56003 - Molybdenum cofactor-binding domain | 0 | Direct |
54416,54416,49998 54416 - Amine oxidase N-terminal region 54416 - Amine oxidase N-terminal region 49998 - Amine oxidase catalytic domain | 0 | Direct |
55785,55781,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like 55781 - GAF domain-like | 0 | Direct |
55781,55781,55785 55781 - GAF domain-like 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
54292,47741,56176 54292 - 2Fe-2S ferredoxin-like 47741 - CO dehydrogenase ISP C-domain like 56176 - FAD-binding/transporter-associated domain-like | 0 | Direct |
47741,56176,55447 47741 - CO dehydrogenase ISP C-domain like 56176 - FAD-binding/transporter-associated domain-like 55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
52540,46785,158702 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | Direct |
158702,52540,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52833,52833,52833 52833 - Thioredoxin-like 52833 - Thioredoxin-like 52833 - Thioredoxin-like | 0 | Direct |
54534,54534,54534 54534 - FKBP-like 54534 - FKBP-like 54534 - FKBP-like | 0 | Direct |
88946,88659,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
57850,57850,57933 57850 - RING/U-box 57850 - RING/U-box 57933 - TAZ domain | 0 | Direct |
52283,51735,143548 52283 - Formate/glycerate dehydrogenase catalytic domain-like 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | Direct |
50249,57756,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
46785,158702,52540 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52047,52058,56112 52047 - RNI-like 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
54160,54160,52540 54160 - Chromo domain-like 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55781,47384,55874 55781 - GAF domain-like 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
53738,53738,55957 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
55781,55785,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
56176,55447,54665 56176 - FAD-binding/transporter-associated domain-like 55447 - CO dehydrogenase flavoprotein C-terminal domain-like 54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
52540,52540,46785 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain | 0 | Direct |
53300,81995,81811 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | Direct |
81995,82919,53300 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | Direct |
50447,54980,54980 50447 - Translation proteins 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | Direct |
47384,55874,52172 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | Direct |
46938,52087,101576 46938 - CRAL/TRIO N-terminal domain 52087 - CRAL/TRIO domain 101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
51735,48179,52413 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
46785,158702,81296 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | Direct |
54585,52540,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
82919,53300,81995 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
90209,90209,90209 90209 - Ran binding protein zinc finger-like 90209 - Ran binding protein zinc finger-like 90209 - Ran binding protein zinc finger-like | 0 | Direct |
54534,54534,48452 54534 - FKBP-like 54534 - FKBP-like 48452 - TPR-like | 0 | Direct |
51230,47005,52777 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | Direct |
Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
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