SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): plant ovule

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + 2:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ 1:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
0:   plant ovule [PO:0020003] <8>(8|10) (8|4|0)
- 1:   integument [PO:0020021] <4>(4|3) (4|0|0)
- 1:   nucellus [PO:0020020] <3>(2|1) (2|1|0)
- 1:   antiraphe [PO:0020028](0|0) (0|0|0)
- 1:   chalaza [PO:0020026](0|0) (0|0|0)
- 1:   funicle [PO:0020006](0|0) (0|0|0)
- 1:   ovuliferous scale ovule [PO:0025491](0|0) (0|0|0)
- 1:   plant ovary ovule [PO:0025490](0|0) (0|0|0)
- 1:   raphe [PO:0020027](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000003744Direct
DNA-binding pseudobarrel domain0.0000002528Direct
Profilin (actin-binding protein)0.000006642Direct
Bet v1-like0.000008249Direct
Beta-D-glucan exohydrolase, C-terminal domain0.0001712Direct
SRF-like0.0005696Direct
HMG-box0.0007582Direct
Clavaminate synthase-like0.2547Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.0000000001787Direct
B3 DNA binding domain0.0000003083Direct
Profilin (actin-binding protein)0.000007011Direct
Trehalose-6-phosphate synthase, OtsA0.0000245Direct
NagZ-like0.000181Direct
Beta-D-glucan exohydrolase, C-terminal domain0.000181Direct
Class II glutamine amidotransferases0.0002433Direct
SRF-like0.0007776Direct
HMG-box0.0008035Direct
Penicillin synthase-like0.1146Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000002899Direct
DNA-binding pseudobarrel domain0.000000196Direct
Profilin (actin-binding protein)0.000005173Direct
Bet v1-like0.000006426Direct
Beta-D-glucan exohydrolase, C-terminal domain0.0001345Direct
SRF-like0.0004499Direct
HMG-box0.0005998Direct
Clavaminate synthase-like0.2326Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55961,55961
  • 55961 - Bet v1-like
  • 55961 - Bet v1-like
  • 0.0000003505Direct
    101936,101936
  • 101936 - DNA-binding pseudobarrel domain
  • 101936 - DNA-binding pseudobarrel domain
  • 0.00001481Direct
    53756,56784
  • 53756 - UDP-Glycosyltransferase/glycogen phosphorylase
  • 56784 - HAD-like
  • 0.00004619Direct
    51445,52279
  • 51445 - (Trans)glycosidases
  • 52279 - Beta-D-glucan exohydrolase, C-terminal domain
  • 0.0001345Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)