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Plant ANatomical entity (PAN): leaf apex
(show info)
Phenotype Ontology
Like Gene Ontology (GO), phenotypy ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Phenotype ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology (DO) DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology (HP) HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology (MP) MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology (WP) WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology (YP) Based on YP which is the major contributor to the Ascomycete phenotype ontology, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology (FP) FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology (FA) FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology (ZA) ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology (XA) XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology (AP) As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology (EC) Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- DrugBank ATC (DB) Ontology (DB) In the Anatomical Therapeutic Chemical (ATC) classification system, drugs are classified in groups at five different levels according to the organ or system (1st level, anatomical main group) on which they act and their therapeutic (2nd level, therapeutic subgroup), pharmacological (3rd level, pharmacological subgroup) and chemical properties (4th level, chemical subgroup; 5th level, chemical substance). Only drugs in DrugBank are considered.
- UniProtKB KeyWords (KW) Ontology (KW) Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- UniProtKB UniPathway (UP) Ontology (UP) UP is a fully manually curated resource for the representation and annotation of metabolic pathways, being used as controlled vocabulary for pathway annotation in UniProtKB.
Structural Domain Phenotype Ontology and its Annotations
Structural Classification of Proteins (SCOP) classifies evolutionary-related domains into Superfamily level and Family level. Using the phenotype ontologies above, we have generated the domain-centric phenotype annotations, and further identified those phenotype terms which are the most informative to annotate SCOP domains. Promisingly, domain-centric phenotypic annotations can serve as an alternative starting point to explore genotype-phenotype relationships. We provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Structural Domain Disease Ontology (DO) Ontology (SDDO) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DO.txt, and the corresponding ontology:SDDO.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Human Phenotype (HP) Ontology (SDHP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2HP.txt, and the corresponding ontology:SDHP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Mouse Phenotype (MP) Ontology (SDMP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2MP.txt, and the corresponding ontology:SDMP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Worm Phenotype (WP) Ontology (SDWP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2WP.txt, and the corresponding ontology:SDWP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Yeast Phenotype (YP) Ontology (SDYP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2YP.txt, and the corresponding ontology:SDYP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Phenotype (FP) Ontology (SDFP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FP.txt, and the corresponding ontology:SDFP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Anatomy (FA) Ontology (SDFA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FA.txt, and the corresponding ontology:SDFA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Zebrafish Anatomy (ZA) Ontology (SDZA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2ZA.txt, and the corresponding ontology:SDZA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Xenopus Anatomy (XA) Ontology (SDXA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2XA.txt, and the corresponding ontology:SDXA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Arabidopsis Plant Ontology (AP) Ontology (SDAP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2AP.txt, and the corresponding ontology:SDAP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Enzyme Commission (EC) Ontology (SDEC) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2EC.txt, and the corresponding ontology:SDEC.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain DrugBank ATC (DB) Ontology (SDDB) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DB.txt, and the corresponding ontology:SDDB.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB KeyWords (KW) Ontology (SDKW) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2KW.txt, and the corresponding ontology:SDKW.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB UniPathway (UP) Ontology (SDUP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2UP.txt, and the corresponding ontology:SDUP.txt) and mysql tables (Domain2PO.sql.gz).
Supra-domain Phenotype Ontology and its Annotations
Although domain-centric annotations hold great promise in describing phenotypic nature of independent domains, most domains themselves may not just work alone. In multi-domain proteins, they may be combined together to form distinct domain architectures. The recombination of the existing domains is considered as one of major driving forces for phenotypic diversificaation. As an extension, we have also generated supra-domain phenotype ontology and its annotations. Compared to domain-centric phenotype ontology and annotations (SCOP domains at the Superfamily level and Family level), this version focuses on supra-domains and individual SCOP domains ONLY at the Superfamily level. Besides, in terms of individual superfamilies, their annotations from the domain-centric version may be different from those from supra-domains version. Depending on your focus, the former should be used for the consideration of both the Superfamily level and Family level, otherwise the latter should be used if you are interested in domain combinations. Also, we provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Supra-domain Domain Disease Ontology (DO) Ontology (SPDO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DO.txt, and the corresponding ontology:SPDO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Human Phenotype (HP) Ontology (SPHO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2HP.txt, and the corresponding ontology:SPHO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Mouse Phenotype (MP) Ontology (SPMP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2MP.txt, and the corresponding ontology:SPMP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Worm Phenotype (WP) Ontology (SPWP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2WP.txt, and the corresponding ontology:SPWP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Yeast Phenotype (YP) Ontology (SPYP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2YP.txt, and the corresponding ontology:SPYP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Phenotype (FP) Ontology (SPFP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FP.txt, and the corresponding ontology:SPFP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Anatomy (FA) Ontology (SPFA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FA.txt, and the corresponding ontology:SPFA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Zebrafish Anatomy (ZA) Ontology (SPZA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2ZA.txt, and the corresponding ontology:SPZA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Xenopus Anatomy (XA) Ontology (SPXA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2XA.txt, and the corresponding ontology:SPXA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Arabidopsis Plant Ontology (AP) Ontology (SPAP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2AP.txt, and the corresponding ontology:SPAP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Enzyme Commission (EC) Ontology (SPEC) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2EC.txt, and the corresponding ontology:SPEC.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain DrugBank ATC (DB) Ontology (SPDB) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DB.txt, and the corresponding ontology:SPDB.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB KeyWords (KW) Ontology (SPKW) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2KW.txt, and the corresponding ontology:SPKW.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB UniPathway (UP) Ontology (SPUP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2UP.txt, and the corresponding ontology:SPUP.txt) and mysql tables (SP2PO.sql.gz).
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Superfamily(show details)
Superfamily domains annotated to this AP term (Not in SDAP)
Highlighted in gray are those with FDR_all>0.001
SCOP term | FDR (all) | Annotation (direct or inherited) |
RibA-like | 0 | DIRECT |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
YrdC/RibB | 0 | DIRECT |
Ribosomal protein S2 | 0 | DIRECT |
FF domain | 0 | DIRECT |
Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
Signal peptide-binding domain | 0 | DIRECT |
lambda repressor-like DNA-binding domains | 0 | DIRECT |
Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
Electron transport accessory proteins | 0 | DIRECT |
RraA-like | 0 | DIRECT |
CYTH-like phosphatases | 0 | DIRECT |
S-adenosylmethionine synthetase | 0 | DIRECT |
Serine metabolism enzymes domain | 0 | DIRECT |
Preprotein translocase SecE subunit | 0 | DIRECT |
Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
SIS domain | 0 | DIRECT |
Folate-binding domain | 0 | DIRECT |
Chelatase | 0 | DIRECT |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
Succinyl-CoA synthetase domains | 0 | DIRECT |
Ribosomal protein L4 | 0 | DIRECT |
Tetrapyrrole methylase | 0 | DIRECT |
Ribosomal protein L19 (L19e) | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
Lipoxigenase | 0 | DIRECT |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
Ribosomal protein L10-like | 0 | DIRECT |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
Ribosomal protein L14 | 0 | DIRECT |
Phosphoglucomutase, first 3 domains | 0 | DIRECT |
Casein kinase II beta subunit | 0 | DIRECT |
Heme-dependent catalase-like | 0 | DIRECT |
Seven-hairpin glycosidases | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
Preprotein translocase SecY subunit | 0 | DIRECT |
Diaminopimelate epimerase-like | 0 | DIRECT |
Tautomerase/MIF | 0 | DIRECT |
Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
Tim10-like | 0 | DIRECT |
MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
Phosphoglycerate kinase | 0 | DIRECT |
ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
BolA-like | 0 | DIRECT |
LeuD/IlvD-like | 0 | DIRECT |
LysM domain | 0 | DIRECT |
Peptide methionine sulfoxide reductase | 0 | DIRECT |
AMPKBI-like | 0 | DIRECT |
Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Ribosomal protein L29 (L29p) | 0 | DIRECT |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
Ribosomal protein S6 | 0 | DIRECT |
Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
TATA-box binding protein-like | 0 | DIRECT |
Ribosomal protein L39e | 0 | DIRECT |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
XPC-binding domain | 0 | DIRECT |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
tRNA-binding arm | 0 | DIRECT |
FKBP-like | 0 | DIRECT |
Pentapeptide repeat-like | 0 | DIRECT |
P-domain of calnexin/calreticulin | 0 | DIRECT |
Cytochrome c | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
Cu,Zn superoxide dismutase-like | 0 | DIRECT |
eIF1-like | 0 | DIRECT |
Ribosomal protein L31e | 0 | DIRECT |
R3H domain | 0 | DIRECT |
FAD-dependent thiol oxidase | 0 | DIRECT |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Homocysteine S-methyltransferase | 0 | DIRECT |
alpha-helical ferredoxin | 0 | DIRECT |
Transducin (alpha subunit), insertion domain | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
SH3-domain | 0 | DIRECT |
NHL repeat | 0 | DIRECT |
Ribosomal protein L13 | 0 | DIRECT |
Metallo-dependent hydrolases | 0 | DIRECT |
Globin-like | 0 | DIRECT |
Lipocalins | 0 | DIRECT |
Ribosomal protein L30p/L7e | 0 | DIRECT |
Prokaryotic ribosomal protein L17 | 0 | DIRECT |
Putative isomerase YbhE | 0 | DIRECT |
Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
Saposin | 0 | DIRECT |
FAH | 0 | DIRECT |
LDH C-terminal domain-like | 0 | DIRECT |
E2F-DP heterodimerization region | 0 | DIRECT |
Dimeric alpha+beta barrel | 0 | DIRECT |
GlnB-like | 0 | DIRECT |
Aconitase iron-sulfur domain | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
HesB-like domain | 0 | DIRECT |
S13-like H2TH domain | 0 | DIRECT |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
Chorismate mutase II | 0 | DIRECT |
Clc chloride channel | 0 | DIRECT |
Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
Glycolipid transfer protein, GLTP | 0 | DIRECT |
Ribosomal protein L16p/L10e | 0 | DIRECT |
Aldolase | 0.000006247 | DIRECT |
SCOP term | FDR (all) | Annotation (direct or inherited) |
RibA-like | 0 | Direct |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
YrdC/RibB | 0 | Direct |
Ribosomal protein S2 | 0 | Direct |
FF domain | 0 | Direct |
Expressed protein At2g23090/F21P24.15 | 0 | Direct |
Signal peptide-binding domain | 0 | Direct |
lambda repressor-like DNA-binding domains | 0 | Direct |
Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
Electron transport accessory proteins | 0 | Direct |
RraA-like | 0 | Direct |
CYTH-like phosphatases | 0 | Direct |
S-adenosylmethionine synthetase | 0 | Direct |
Serine metabolism enzymes domain | 0 | Direct |
Preprotein translocase SecE subunit | 0 | Direct |
Magnesium transport protein CorA, transmembrane region | 0 | Direct |
SIS domain | 0 | Direct |
Folate-binding domain | 0 | Direct |
Chelatase | 0 | Direct |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
Succinyl-CoA synthetase domains | 0 | Direct |
Ribosomal protein L4 | 0 | Direct |
Tetrapyrrole methylase | 0 | Direct |
Ribosomal protein L19 (L19e) | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
Lipoxigenase | 0 | Direct |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
Ribosomal protein L10-like | 0 | Direct |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
Composite domain of metallo-dependent hydrolases | 0 | Direct |
Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
Ribosomal protein L14 | 0 | Direct |
Phosphoglucomutase, first 3 domains | 0 | Direct |
Casein kinase II beta subunit | 0 | Direct |
Heme-dependent catalase-like | 0 | Direct |
Seven-hairpin glycosidases | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
Preprotein translocase SecY subunit | 0 | Direct |
Diaminopimelate epimerase-like | 0 | Direct |
Tautomerase/MIF | 0 | Direct |
Oxidoreductase molybdopterin-binding domain | 0 | Direct |
Tim10-like | 0 | Direct |
MurD-like peptide ligases, catalytic domain | 0 | Direct |
Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
Phosphoglycerate kinase | 0 | Direct |
ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
BolA-like | 0 | Direct |
LeuD/IlvD-like | 0 | Direct |
LysM domain | 0 | Direct |
Peptide methionine sulfoxide reductase | 0 | Direct |
AMPKBI-like | 0 | Direct |
Head domain of nucleotide exchange factor GrpE | 0 | Direct |
Ribosomal protein L29 (L29p) | 0 | Direct |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
ssDNA-binding transcriptional regulator domain | 0 | Direct |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
Ribosomal protein S6 | 0 | Direct |
Ribosomal L11/L12e N-terminal domain | 0 | Direct |
TATA-box binding protein-like | 0 | Direct |
Ribosomal protein L39e | 0 | Direct |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
XPC-binding domain | 0 | Direct |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
tRNA-binding arm | 0 | Direct |
FKBP-like | 0 | Direct |
Pentapeptide repeat-like | 0 | Direct |
P-domain of calnexin/calreticulin | 0 | Direct |
Cytochrome c | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
Cu,Zn superoxide dismutase-like | 0 | Direct |
eIF1-like | 0 | Direct |
Ribosomal protein L31e | 0 | Direct |
R3H domain | 0 | Direct |
FAD-dependent thiol oxidase | 0 | Direct |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
Homocysteine S-methyltransferase | 0 | Direct |
alpha-helical ferredoxin | 0 | Direct |
Transducin (alpha subunit), insertion domain | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
SH3-domain | 0 | Direct |
NHL repeat | 0 | Direct |
Ribosomal protein L13 | 0 | Direct |
Metallo-dependent hydrolases | 0 | Direct |
Globin-like | 0 | Direct |
Lipocalins | 0 | Direct |
Ribosomal protein L30p/L7e | 0 | Direct |
Prokaryotic ribosomal protein L17 | 0 | Direct |
Putative isomerase YbhE | 0 | Direct |
Phosphoglucomutase, C-terminal domain | 0 | Direct |
Saposin | 0 | Direct |
FAH | 0 | Direct |
LDH C-terminal domain-like | 0 | Direct |
E2F-DP heterodimerization region | 0 | Direct |
Dimeric alpha+beta barrel | 0 | Direct |
GlnB-like | 0 | Direct |
Aconitase iron-sulfur domain | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
Prokaryotic type I DNA topoisomerase | 0 | Direct |
Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
HesB-like domain | 0 | Direct |
S13-like H2TH domain | 0 | Direct |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
Chorismate mutase II | 0 | Direct |
Clc chloride channel | 0 | Direct |
Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
Glycolipid transfer protein, GLTP | 0 | Direct |
Ribosomal protein L16p/L10e | 0 | Direct |
Aldolase | 0.000006247 | Direct |
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Family(show details)
Family domains annotated to this AP term (Not in SDAP)
Highlighted in gray are those with FDR_all>0.001
SCOP term | FDR (all) | Annotation (direct or inherited) |
SH3-domain | 0 | DIRECT |
RelA/SpoT domain | 0 | DIRECT |
Tail specific protease, catalytic domain | 0 | DIRECT |
PAPS reductase-like | 0 | DIRECT |
Phytochrome-specific domain | 0 | DIRECT |
Ran-binding domain | 0 | DIRECT |
ZZ domain | 0 | DIRECT |
Cytidylyltransferase | 0 | DIRECT |
Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
DNA repair glycosylase, 2 C-terminal domains | 0 | DIRECT |
AMPKBI-like | 0 | DIRECT |
GAF domain | 0 | DIRECT |
Acyl-ACP thioesterase-like | 0 | DIRECT |
Homoserine dehydrogenase-like | 0 | DIRECT |
HAT/Suf repeat | 0 | DIRECT |
La domain | 0 | DIRECT |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Tim10/DDP | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
ATP sulfurylase catalytic domain | 0 | DIRECT |
Ribosomal protein L30p/L7e | 0 | DIRECT |
Ribosomal protein L39e | 0 | DIRECT |
Ribosomal protein L4 | 0 | DIRECT |
Trunk domain of Sec23/24 | 0 | DIRECT |
(Glycosyl)asparaginase | 0 | DIRECT |
Ribosomal protein S2 | 0 | DIRECT |
Lipoxigenase N-terminal domain | 0 | DIRECT |
GroES | 0 | DIRECT |
eIF5a N-terminal domain-like | 0 | DIRECT |
Peptide methionine sulfoxide reductase | 0 | DIRECT |
Pentapeptide repeats | 0 | DIRECT |
RWD domain | 0 | DIRECT |
Tetrapyrrole methylase | 0 | DIRECT |
D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
LEA14-like | 0 | DIRECT |
Clp protease, ClpP subunit | 0 | DIRECT |
Enolase | 0 | DIRECT |
PDI-like | 0 | DIRECT |
BolA-like | 0 | DIRECT |
Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
Heme-dependent catalases | 0 | DIRECT |
Reductases | 0 | DIRECT |
Ribosomal protein L29 (L29p) | 0 | DIRECT |
ATP sulfurylase N-terminal domain | 0 | DIRECT |
Sec63 N-terminal domain | 0 | DIRECT |
Dihydrodipicolinate reductase-like | 0 | DIRECT |
Swaposin | 0 | DIRECT |
Thiolase-related | 0 | DIRECT |
S-adenosylmethionine synthetase | 0 | DIRECT |
Ribosomal protein L14 | 0 | DIRECT |
Cdc48 N-terminal domain-like | 0 | DIRECT |
Preprotein translocase SecY subunit | 0 | DIRECT |
Leukotriene A4 hydrolase catalytic domain | 0 | DIRECT |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
FF domain | 0 | DIRECT |
Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
5' nucleotidase-like | 0 | DIRECT |
Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
Methionine aminopeptidase, insert domain | 0 | DIRECT |
Ribosomal protein L19 (L19e) | 0 | DIRECT |
PCI domain (PINT motif) | 0 | DIRECT |
Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
Plant transcriptional regulator PBF-2 | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
Glycerol-3-phosphate dehydrogenase | 0 | DIRECT |
Plant stress-induced protein | 0 | DIRECT |
Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
GABARAP-like | 0 | DIRECT |
Eps15 homology domain (EH domain) | 0 | DIRECT |
G domain-linked domain | 0 | DIRECT |
Casein kinase II beta subunit | 0 | DIRECT |
Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
1,3-glucuronyltransferase | 0 | DIRECT |
Ribosomal protein L3 | 0 | DIRECT |
RNB domain-like | 0 | DIRECT |
Ribosomal protein L10e | 0 | DIRECT |
Homocysteine S-methyltransferase | 0 | DIRECT |
PUA domain | 0 | DIRECT |
Signal peptide-binding domain | 0 | DIRECT |
DNase I-like | 0 | DIRECT |
NadC N-terminal domain-like | 0 | DIRECT |
Pseudouridine synthase II TruB | 0 | DIRECT |
Choline kinase | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
Ribosomal protein S6 | 0 | DIRECT |
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | DIRECT |
Molybdenum cofactor biosynthesis protein MoeB | 0 | DIRECT |
ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
HesB-like domain | 0 | DIRECT |
LON domain-like | 0 | DIRECT |
Aminoacid dehydrogenases | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
beta-sandwich domain of Sec23/24 | 0 | DIRECT |
YicI N-terminal domain-like | 0 | DIRECT |
Ribosomal protein L31e | 0 | DIRECT |
MYND zinc finger | 0 | DIRECT |
NadC C-terminal domain-like | 0 | DIRECT |
2Fe-2S ferredoxin-related | 0 | DIRECT |
Ribosomal protein L13 | 0 | DIRECT |
Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
CAT-like | 0 | DIRECT |
Plant lipoxigenases | 0 | DIRECT |
alpha-Amylases, C-terminal beta-sheet domain | 0 | DIRECT |
FAD-dependent thiol oxidase | 0 | DIRECT |
Calnexin/calreticulin | 0 | DIRECT |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
HEAT repeat | 0 | DIRECT |
Preprotein translocase SecE subunit | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
SerA intervening domain-like | 0 | DIRECT |
Rps19E-like | 0 | DIRECT |
Prolyl oligopeptidase, N-terminal domain | 0 | DIRECT |
UDP-glucose pyrophosphorylase | 0 | DIRECT |
LeuD-like | 0 | DIRECT |
Shikimate kinase (AroK) | 0 | DIRECT |
PhzC/PhzF-like | 0 | DIRECT |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
Ribosomal protein S27e | 0 | DIRECT |
Sec63 C-terminal domain-like | 0 | DIRECT |
Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
Aminomethyltransferase folate-binding domain | 0 | DIRECT |
FKBP immunophilin/proline isomerase | 0 | DIRECT |
Class I aldolase | 0 | DIRECT |
P-domain of calnexin/calreticulin | 0 | DIRECT |
Spermidine synthase | 0 | DIRECT |
RNase Z-like | 0 | DIRECT |
Rubredoxin | 0 | DIRECT |
rRNA adenine dimethylase-like | 0 | DIRECT |
Receiver domain of the ethylene receptor | 0 | DIRECT |
IPP isomerase-like | 0 | DIRECT |
6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
Smc hinge domain | 0 | DIRECT |
Starch-binding domain | 0 | DIRECT |
Folylpolyglutamate synthetase | 0 | DIRECT |
Ribosomal protein S13 | 0 | DIRECT |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
EDF1-like | 0 | DIRECT |
Cystatins | 0 | DIRECT |
AMPK-beta glycogen binding domain-like | 0 | DIRECT |
L23p | 0 | DIRECT |
Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
RraA-like | 0 | DIRECT |
Clc chloride channel | 0 | DIRECT |
LysM domain | 0 | DIRECT |
Sigma4 domain | 0 | DIRECT |
N-acetyl-l-glutamate kinase | 0 | DIRECT |
HMGL-like | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
gamma-carbonic anhydrase-like | 0 | DIRECT |
Hypothetical protein HI1317 | 0 | DIRECT |
R3H domain | 0 | DIRECT |
Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
Aconitase iron-sulfur domain | 0 | DIRECT |
Allosteric chorismate mutase | 0 | DIRECT |
Sedlin (SEDL) | 0 | DIRECT |
MIF-related | 0 | DIRECT |
BphP N-terminal domain-like | 0 | DIRECT |
CoA-binding domain | 0 | DIRECT |
eIF1-like | 0 | DIRECT |
FAH | 0 | DIRECT |
Ribosomal protein L10-like | 0 | DIRECT |
E2F dimerization segment | 0 | DIRECT |
WrbA-like | 0 | DIRECT |
N-type ATP pyrophosphatases | 0 | DIRECT |
Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Phosphoglucomutase, first 3 domains | 0 | DIRECT |
LDH N-terminal domain-like | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
Transducin (alpha subunit), insertion domain | 0 | DIRECT |
Prokaryotic ribosomal protein L17 | 0 | DIRECT |
Class-II DAHP synthetase | 0 | DIRECT |
monodomain cytochrome c | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
Ribosomal protein L37e | 0 | DIRECT |
beta-Phosphoglucomutase-like | 0 | DIRECT |
Cu,Zn superoxide dismutase-like | 0 | DIRECT |
XPC-binding domain | 0 | DIRECT |
Lactate & malate dehydrogenases, C-terminal domain | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
NHL repeat | 0 | DIRECT |
Glycolipid transfer protein, GLTP | 0 | DIRECT |
Succinyl-CoA synthetase domains | 0 | DIRECT |
SufE-like | 0 | DIRECT |
Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
RibA-like | 0 | DIRECT |
Phosphoglycerate kinase | 0 | DIRECT |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
Ribosomal protein S15 | 0 | DIRECT |
Myf domain | 0 | DIRECT |
SCOP term | FDR (all) | Annotation (direct or inherited) |
SH3-domain | 0 | Direct |
RelA/SpoT domain | 0 | Direct |
Tail specific protease, catalytic domain | 0 | Direct |
PAPS reductase-like | 0 | Direct |
Phytochrome-specific domain | 0 | Direct |
Ran-binding domain | 0 | Direct |
ZZ domain | 0 | Direct |
Cytidylyltransferase | 0 | Direct |
Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
DNA repair glycosylase, 2 C-terminal domains | 0 | Direct |
AMPKBI-like | 0 | Direct |
GAF domain | 0 | Direct |
Acyl-ACP thioesterase-like | 0 | Direct |
Homoserine dehydrogenase-like | 0 | Direct |
HAT/Suf repeat | 0 | Direct |
La domain | 0 | Direct |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
Tim10/DDP | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
ATP sulfurylase catalytic domain | 0 | Direct |
Ribosomal protein L30p/L7e | 0 | Direct |
Ribosomal protein L39e | 0 | Direct |
Ribosomal protein L4 | 0 | Direct |
Trunk domain of Sec23/24 | 0 | Direct |
(Glycosyl)asparaginase | 0 | Direct |
Ribosomal protein S2 | 0 | Direct |
Lipoxigenase N-terminal domain | 0 | Direct |
GroES | 0 | Direct |
eIF5a N-terminal domain-like | 0 | Direct |
Peptide methionine sulfoxide reductase | 0 | Direct |
Pentapeptide repeats | 0 | Direct |
RWD domain | 0 | Direct |
Tetrapyrrole methylase | 0 | Direct |
D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
LEA14-like | 0 | Direct |
Clp protease, ClpP subunit | 0 | Direct |
Enolase | 0 | Direct |
PDI-like | 0 | Direct |
BolA-like | 0 | Direct |
Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
Heme-dependent catalases | 0 | Direct |
Reductases | 0 | Direct |
Ribosomal protein L29 (L29p) | 0 | Direct |
ATP sulfurylase N-terminal domain | 0 | Direct |
Sec63 N-terminal domain | 0 | Direct |
Dihydrodipicolinate reductase-like | 0 | Direct |
Swaposin | 0 | Direct |
Thiolase-related | 0 | Direct |
S-adenosylmethionine synthetase | 0 | Direct |
Ribosomal protein L14 | 0 | Direct |
Cdc48 N-terminal domain-like | 0 | Direct |
Preprotein translocase SecY subunit | 0 | Direct |
Leukotriene A4 hydrolase catalytic domain | 0 | Direct |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
FF domain | 0 | Direct |
Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
5' nucleotidase-like | 0 | Direct |
Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
Methionine aminopeptidase, insert domain | 0 | Direct |
Ribosomal protein L19 (L19e) | 0 | Direct |
PCI domain (PINT motif) | 0 | Direct |
Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
Plant transcriptional regulator PBF-2 | 0 | Direct |
Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
Glycerol-3-phosphate dehydrogenase | 0 | Direct |
Plant stress-induced protein | 0 | Direct |
Ribosomal L11/L12e N-terminal domain | 0 | Direct |
Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
GABARAP-like | 0 | Direct |
Eps15 homology domain (EH domain) | 0 | Direct |
G domain-linked domain | 0 | Direct |
Casein kinase II beta subunit | 0 | Direct |
Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
1,3-glucuronyltransferase | 0 | Direct |
Ribosomal protein L3 | 0 | Direct |
RNB domain-like | 0 | Direct |
Ribosomal protein L10e | 0 | Direct |
Homocysteine S-methyltransferase | 0 | Direct |
PUA domain | 0 | Direct |
Signal peptide-binding domain | 0 | Direct |
DNase I-like | 0 | Direct |
NadC N-terminal domain-like | 0 | Direct |
Pseudouridine synthase II TruB | 0 | Direct |
Choline kinase | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
Ribosomal protein S6 | 0 | Direct |
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | Direct |
Molybdenum cofactor biosynthesis protein MoeB | 0 | Direct |
ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
HesB-like domain | 0 | Direct |
LON domain-like | 0 | Direct |
Aminoacid dehydrogenases | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
Oxidoreductase molybdopterin-binding domain | 0 | Direct |
beta-sandwich domain of Sec23/24 | 0 | Direct |
YicI N-terminal domain-like | 0 | Direct |
Ribosomal protein L31e | 0 | Direct |
MYND zinc finger | 0 | Direct |
NadC C-terminal domain-like | 0 | Direct |
2Fe-2S ferredoxin-related | 0 | Direct |
Ribosomal protein L13 | 0 | Direct |
Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
CAT-like | 0 | Direct |
Plant lipoxigenases | 0 | Direct |
alpha-Amylases, C-terminal beta-sheet domain | 0 | Direct |
FAD-dependent thiol oxidase | 0 | Direct |
Calnexin/calreticulin | 0 | Direct |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
HEAT repeat | 0 | Direct |
Preprotein translocase SecE subunit | 0 | Direct |
Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
SerA intervening domain-like | 0 | Direct |
Rps19E-like | 0 | Direct |
Prolyl oligopeptidase, N-terminal domain | 0 | Direct |
UDP-glucose pyrophosphorylase | 0 | Direct |
LeuD-like | 0 | Direct |
Shikimate kinase (AroK) | 0 | Direct |
PhzC/PhzF-like | 0 | Direct |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
Ribosomal protein S27e | 0 | Direct |
Sec63 C-terminal domain-like | 0 | Direct |
Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
Aminomethyltransferase folate-binding domain | 0 | Direct |
FKBP immunophilin/proline isomerase | 0 | Direct |
Class I aldolase | 0 | Direct |
P-domain of calnexin/calreticulin | 0 | Direct |
Spermidine synthase | 0 | Direct |
RNase Z-like | 0 | Direct |
Rubredoxin | 0 | Direct |
rRNA adenine dimethylase-like | 0 | Direct |
Receiver domain of the ethylene receptor | 0 | Direct |
IPP isomerase-like | 0 | Direct |
6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | Direct |
Smc hinge domain | 0 | Direct |
Starch-binding domain | 0 | Direct |
Folylpolyglutamate synthetase | 0 | Direct |
Ribosomal protein S13 | 0 | Direct |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
EDF1-like | 0 | Direct |
Cystatins | 0 | Direct |
AMPK-beta glycogen binding domain-like | 0 | Direct |
L23p | 0 | Direct |
Prokaryotic type I DNA topoisomerase | 0 | Direct |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
RraA-like | 0 | Direct |
Clc chloride channel | 0 | Direct |
LysM domain | 0 | Direct |
Sigma4 domain | 0 | Direct |
N-acetyl-l-glutamate kinase | 0 | Direct |
HMGL-like | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
gamma-carbonic anhydrase-like | 0 | Direct |
Hypothetical protein HI1317 | 0 | Direct |
R3H domain | 0 | Direct |
Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
Aconitase iron-sulfur domain | 0 | Direct |
Allosteric chorismate mutase | 0 | Direct |
Sedlin (SEDL) | 0 | Direct |
MIF-related | 0 | Direct |
BphP N-terminal domain-like | 0 | Direct |
CoA-binding domain | 0 | Direct |
eIF1-like | 0 | Direct |
FAH | 0 | Direct |
Ribosomal protein L10-like | 0 | Direct |
E2F dimerization segment | 0 | Direct |
WrbA-like | 0 | Direct |
N-type ATP pyrophosphatases | 0 | Direct |
Head domain of nucleotide exchange factor GrpE | 0 | Direct |
Phosphoglucomutase, first 3 domains | 0 | Direct |
LDH N-terminal domain-like | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
Phosphoglucomutase, C-terminal domain | 0 | Direct |
Transducin (alpha subunit), insertion domain | 0 | Direct |
Prokaryotic ribosomal protein L17 | 0 | Direct |
Class-II DAHP synthetase | 0 | Direct |
monodomain cytochrome c | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
Ribosomal protein L37e | 0 | Direct |
beta-Phosphoglucomutase-like | 0 | Direct |
Cu,Zn superoxide dismutase-like | 0 | Direct |
XPC-binding domain | 0 | Direct |
Lactate & malate dehydrogenases, C-terminal domain | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
NHL repeat | 0 | Direct |
Glycolipid transfer protein, GLTP | 0 | Direct |
Succinyl-CoA synthetase domains | 0 | Direct |
SufE-like | 0 | Direct |
Magnesium transport protein CorA, transmembrane region | 0 | Direct |
RibA-like | 0 | Direct |
Phosphoglycerate kinase | 0 | Direct |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
Ribosomal protein S15 | 0 | Direct |
Myf domain | 0 | Direct |
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A presence/absence matrix is generated using protein domain
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Supra-domain (including individual superfamily)
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
Homocysteine S-methyltransferase | 0 | DIRECT |
Ribosomal protein L31e | 0 | DIRECT |
Ribosomal protein L13 | 0 | DIRECT |
Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
Ribosomal protein L30p/L7e | 0 | DIRECT |
FKBP-like | 0 | DIRECT |
Ribosomal protein L14 | 0 | DIRECT |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
Seven-hairpin glycosidases | 0 | DIRECT |
Ribosomal protein L39e | 0 | DIRECT |
Succinyl-CoA synthetase domains | 0 | DIRECT |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
Phosphoglucomutase, first 3 domains | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
Ribosomal protein L29 (L29p) | 0 | DIRECT |
Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
Glycolipid transfer protein, GLTP | 0 | DIRECT |
AMPKBI-like | 0 | DIRECT |
FF domain | 0 | DIRECT |
FAH | 0 | DIRECT |
Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
Signal peptide-binding domain | 0 | DIRECT |
eIF1-like | 0 | DIRECT |
Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
Serine metabolism enzymes domain | 0 | DIRECT |
LDH C-terminal domain-like | 0 | DIRECT |
S13-like H2TH domain | 0 | DIRECT |
Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
Electron transport accessory proteins | 0 | DIRECT |
P-domain of calnexin/calreticulin | 0 | DIRECT |
FAD-dependent thiol oxidase | 0 | DIRECT |
Metallo-dependent hydrolases | 0 | DIRECT |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Preprotein translocase SecE subunit | 0 | DIRECT |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
Prokaryotic ribosomal protein L17 | 0 | DIRECT |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
NHL repeat | 0 | DIRECT |
ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
E2F-DP heterodimerization region | 0 | DIRECT |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
Lipocalins | 0 | DIRECT |
Ribosomal protein S6 | 0 | DIRECT |
Phosphoglycerate kinase | 0 | DIRECT |
Preprotein translocase SecY subunit | 0 | DIRECT |
Folate-binding domain | 0 | DIRECT |
Casein kinase II beta subunit | 0 | DIRECT |
Chorismate mutase II | 0 | DIRECT |
BolA-like | 0 | DIRECT |
CYTH-like phosphatases | 0 | DIRECT |
Diaminopimelate epimerase-like | 0 | DIRECT |
Ribosomal protein L16p/L10e | 0 | DIRECT |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
LysM domain | 0 | DIRECT |
LeuD/IlvD-like | 0 | DIRECT |
tRNA-binding arm | 0 | DIRECT |
Cytochrome c | 0 | DIRECT |
Putative isomerase YbhE | 0 | DIRECT |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
Globin-like | 0 | DIRECT |
Dimeric alpha+beta barrel | 0 | DIRECT |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
Tim10-like | 0 | DIRECT |
SIS domain | 0 | DIRECT |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
Tetrapyrrole methylase | 0 | DIRECT |
Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
SH3-domain | 0 | DIRECT |
Saposin | 0 | DIRECT |
Tautomerase/MIF | 0 | DIRECT |
Pentapeptide repeat-like | 0 | DIRECT |
Ribosomal protein L4 | 0 | DIRECT |
YrdC/RibB | 0 | DIRECT |
GlnB-like | 0 | DIRECT |
MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
R3H domain | 0 | DIRECT |
alpha-helical ferredoxin | 0 | DIRECT |
XPC-binding domain | 0 | DIRECT |
Aconitase iron-sulfur domain | 0 | DIRECT |
TATA-box binding protein-like | 0 | DIRECT |
Ribosomal protein S2 | 0 | DIRECT |
Ribosomal protein L19 (L19e) | 0 | DIRECT |
S-adenosylmethionine synthetase | 0 | DIRECT |
Lipoxigenase | 0 | DIRECT |
Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
Heme-dependent catalase-like | 0 | DIRECT |
lambda repressor-like DNA-binding domains | 0 | DIRECT |
Clc chloride channel | 0 | DIRECT |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
RraA-like | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
Cu,Zn superoxide dismutase-like | 0 | DIRECT |
RibA-like | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
Chelatase | 0 | DIRECT |
HesB-like domain | 0 | DIRECT |
Ribosomal protein L10-like | 0 | DIRECT |
Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
Peptide methionine sulfoxide reductase | 0 | DIRECT |
Transducin (alpha subunit), insertion domain | 0 | DIRECT |
Aldolase | 0.000004863 | DIRECT |
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
Homocysteine S-methyltransferase | 0 | Direct |
Ribosomal protein L31e | 0 | Direct |
Ribosomal protein L13 | 0 | Direct |
Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
Ribosomal protein L30p/L7e | 0 | Direct |
FKBP-like | 0 | Direct |
Ribosomal protein L14 | 0 | Direct |
Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
Seven-hairpin glycosidases | 0 | Direct |
Ribosomal protein L39e | 0 | Direct |
Succinyl-CoA synthetase domains | 0 | Direct |
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
Phosphoglucomutase, first 3 domains | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
Ribosomal protein L29 (L29p) | 0 | Direct |
Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
Glycolipid transfer protein, GLTP | 0 | Direct |
AMPKBI-like | 0 | Direct |
FF domain | 0 | Direct |
FAH | 0 | Direct |
Phosphoglucomutase, C-terminal domain | 0 | Direct |
Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
Signal peptide-binding domain | 0 | Direct |
eIF1-like | 0 | Direct |
Prokaryotic type I DNA topoisomerase | 0 | Direct |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
Serine metabolism enzymes domain | 0 | Direct |
LDH C-terminal domain-like | 0 | Direct |
S13-like H2TH domain | 0 | Direct |
Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
Electron transport accessory proteins | 0 | Direct |
P-domain of calnexin/calreticulin | 0 | Direct |
FAD-dependent thiol oxidase | 0 | Direct |
Metallo-dependent hydrolases | 0 | Direct |
Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
Preprotein translocase SecE subunit | 0 | Direct |
FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
Prokaryotic ribosomal protein L17 | 0 | Direct |
Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
NHL repeat | 0 | Direct |
ssDNA-binding transcriptional regulator domain | 0 | Direct |
E2F-DP heterodimerization region | 0 | Direct |
N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
Lipocalins | 0 | Direct |
Ribosomal protein S6 | 0 | Direct |
Phosphoglycerate kinase | 0 | Direct |
Preprotein translocase SecY subunit | 0 | Direct |
Folate-binding domain | 0 | Direct |
Casein kinase II beta subunit | 0 | Direct |
Chorismate mutase II | 0 | Direct |
BolA-like | 0 | Direct |
CYTH-like phosphatases | 0 | Direct |
Diaminopimelate epimerase-like | 0 | Direct |
Ribosomal protein L16p/L10e | 0 | Direct |
Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
LysM domain | 0 | Direct |
LeuD/IlvD-like | 0 | Direct |
tRNA-binding arm | 0 | Direct |
Cytochrome c | 0 | Direct |
Putative isomerase YbhE | 0 | Direct |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
Oxidoreductase molybdopterin-binding domain | 0 | Direct |
Globin-like | 0 | Direct |
Dimeric alpha+beta barrel | 0 | Direct |
D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
Tim10-like | 0 | Direct |
SIS domain | 0 | Direct |
RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
Magnesium transport protein CorA, transmembrane region | 0 | Direct |
Tetrapyrrole methylase | 0 | Direct |
Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
SH3-domain | 0 | Direct |
Saposin | 0 | Direct |
Tautomerase/MIF | 0 | Direct |
Pentapeptide repeat-like | 0 | Direct |
Ribosomal protein L4 | 0 | Direct |
YrdC/RibB | 0 | Direct |
GlnB-like | 0 | Direct |
MurD-like peptide ligases, catalytic domain | 0 | Direct |
R3H domain | 0 | Direct |
alpha-helical ferredoxin | 0 | Direct |
XPC-binding domain | 0 | Direct |
Aconitase iron-sulfur domain | 0 | Direct |
TATA-box binding protein-like | 0 | Direct |
Ribosomal protein S2 | 0 | Direct |
Ribosomal protein L19 (L19e) | 0 | Direct |
S-adenosylmethionine synthetase | 0 | Direct |
Lipoxigenase | 0 | Direct |
Head domain of nucleotide exchange factor GrpE | 0 | Direct |
Heme-dependent catalase-like | 0 | Direct |
lambda repressor-like DNA-binding domains | 0 | Direct |
Clc chloride channel | 0 | Direct |
6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
RraA-like | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
Cu,Zn superoxide dismutase-like | 0 | Direct |
RibA-like | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
Ribosomal L11/L12e N-terminal domain | 0 | Direct |
Chelatase | 0 | Direct |
HesB-like domain | 0 | Direct |
Ribosomal protein L10-like | 0 | Direct |
Expressed protein At2g23090/F21P24.15 | 0 | Direct |
Composite domain of metallo-dependent hydrolases | 0 | Direct |
Peptide methionine sulfoxide reductase | 0 | Direct |
Transducin (alpha subunit), insertion domain | 0 | Direct |
Aldolase | 0.000004863 | Direct |
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
55821,142695 55821 - YrdC/RibB 142695 - RibA-like | 0 | DIRECT |
55781,55781 55781 - GAF domain-like 55781 - GAF domain-like | 0 | DIRECT |
158702,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50022,55961 50022 - ISP domain 55961 - Bet v1-like | 0 | DIRECT |
48403,52540 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
100950,75445 100950 - NagB/RpiA/CoA transferase-like 75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
47005,52777 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | DIRECT |
51338,51556 51338 - Composite domain of metallo-dependent hydrolases 51556 - Metallo-dependent hydrolases | 0 | DIRECT |
52540,52058 52540 - P-loop containing nucleoside triphosphate hydrolases 52058 - L domain-like | 0 | DIRECT |
117916,117916 117916 - Fe-S cluster assembly (FSCA) domain-like 117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
55920,46785 55920 - Creatinase/aminopeptidase 46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
49899,63887 49899 - Concanavalin A-like lectins/glucanases 63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
101908,56219 101908 - Putative isomerase YbhE 56219 - DNase I-like | 0 | DIRECT |
88798,50249 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE) 50249 - Nucleic acid-binding proteins | 0 | DIRECT |
50249,55681 50249 - Nucleic acid-binding proteins 55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
51735,56327 51735 - NAD(P)-binding Rossmann-fold domains 56327 - LDH C-terminal domain-like | 0 | DIRECT |
54980,54980 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | DIRECT |
53732,52016 53732 - Aconitase iron-sulfur domain 52016 - LeuD/IlvD-like | 0 | DIRECT |
54585,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
51905,55424 51905 - FAD/NAD(P)-binding domain 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
54747,46906 54747 - Ribosomal L11/L12e N-terminal domain 46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
82171,53474 82171 - DPP6 N-terminal domain-like 53474 - alpha/beta-Hydrolases | 0 | DIRECT |
56059,52210 56059 - Glutathione synthetase ATP-binding domain-like 52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
55785,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like | 0 | DIRECT |
55781,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
81698,81698 81698 - FF domain 81698 - FF domain | 0 | DIRECT |
56524,81296 56524 - Oxidoreductase molybdopterin-binding domain 81296 - E set domains | 0 | DIRECT |
55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
57850,54928 57850 - RING/U-box 54928 - RNA-binding domain, RBD | 0 | DIRECT |
51045,51045 51045 - WW domain 51045 - WW domain | 0 | DIRECT |
63737,55486 63737 - Leukotriene A4 hydrolase N-terminal domain 55486 - Metalloproteases ("zincins"), catalytic domain | 0 | DIRECT |
46785,144074 46785 - "Winged helix" DNA-binding domain 144074 - E2F-DP heterodimerization region | 0 | DIRECT |
53300,81995 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
51735,48179 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
55874,52172 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | DIRECT |
56219,56219 56219 - DNase I-like 56219 - DNase I-like | 0 | DIRECT |
47895,52540 47895 - Transducin (alpha subunit), insertion domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,90002 52540 - P-loop containing nucleoside triphosphate hydrolases 90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
81383,54518 81383 - F-box domain 54518 - Tubby C-terminal domain-like | 0 | DIRECT |
50630,47862 50630 - Acid proteases 47862 - Saposin | 0 | DIRECT |
52540,47446 52540 - P-loop containing nucleoside triphosphate hydrolases 47446 - Signal peptide-binding domain | 0 | DIRECT |
81995,81811 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | DIRECT |
52402,52833 52402 - Adenine nucleotide alpha hydrolases-like 52833 - Thioredoxin-like | 0 | DIRECT |
82919,53300 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | DIRECT |
81995,82919 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
81811,82754 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
50156,52096 50156 - PDZ domain-like 52096 - ClpP/crotonase | 0 | DIRECT |
64356,49447 64356 - SNARE-like 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
46785,158702 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
50104,50249 50104 - Translation proteins SH3-like domain 50249 - Nucleic acid-binding proteins | 0 | DIRECT |
53738,55957 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
102848,54236 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain 54236 - Ubiquitin-like | 0 | DIRECT |
101238,46934 101238 - XPC-binding domain 46934 - UBA-like | 0 | DIRECT |
53850,55021 53850 - Periplasmic binding protein-like II 55021 - ACT-like | 0 | DIRECT |
52425,48173 52425 - Cryptochrome/photolyase, N-terminal domain 48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
51230,47005 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
54534,54534 54534 - FKBP-like 54534 - FKBP-like | 0 | DIRECT |
50249,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
58014,51064 58014 - Coiled-coil domain of nucleotide exchange factor GrpE 51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
53383,53383 53383 - PLP-dependent transferases 53383 - PLP-dependent transferases | 0 | DIRECT |
53300,57850 53300 - vWA-like 57850 - RING/U-box | 0 | DIRECT |
55021,56112 55021 - ACT-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
158702,81296 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | DIRECT |
158639,63748 158639 - ENT-like 63748 - Tudor/PWWP/MBT | 0 | DIRECT |
101690,69065 101690 - PAZ domain 69065 - RNase III domain-like | 0 | DIRECT |
109604,81301 109604 - HD-domain/PDEase-like 81301 - Nucleotidyltransferase | 0 | DIRECT |
51735,143548 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | DIRECT |
54909,54909 54909 - Dimeric alpha+beta barrel 54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
52833,52833 52833 - Thioredoxin-like 52833 - Thioredoxin-like | 0 | DIRECT |
47473,103506 47473 - EF-hand 103506 - Mitochondrial carrier | 0 | DIRECT |
88697,52374 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | DIRECT |
88659,88659 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
49723,48484 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain) 48484 - Lipoxigenase | 0 | DIRECT |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | DIRECT |
54534,48452 54534 - FKBP-like 48452 - TPR-like | 0 | DIRECT |
54160,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48403,57850 48403 - Ankyrin repeat 57850 - RING/U-box | 0 | DIRECT |
48179,52413 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
52540,48403 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | DIRECT |
81296,51445 81296 - E set domains 51445 - (Trans)glycosidases | 0 | DIRECT |
88946,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
55781,47384 55781 - GAF domain-like 47384 - Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
82199,81822 82199 - SET domain 81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
47661,58038 47661 - t-snare proteins 58038 - SNARE fusion complex | 0 | DIRECT |
46785,54928 46785 - "Winged helix" DNA-binding domain 54928 - RNA-binding domain, RBD | 0 | DIRECT |
52172,52172 52172 - CheY-like 52172 - CheY-like | 0 | DIRECT |
55785,55785 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
54160,54160 54160 - Chromo domain-like 54160 - Chromo domain-like | 0 | DIRECT |
81296,52540 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
143548,55021 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | DIRECT |
54695,48452 54695 - POZ domain 48452 - TPR-like | 0 | DIRECT |
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
55821,142695 55821 - YrdC/RibB 142695 - RibA-like | 0 | Direct |
55781,55781 55781 - GAF domain-like 55781 - GAF domain-like | 0 | Direct |
158702,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50022,55961 50022 - ISP domain 55961 - Bet v1-like | 0 | Direct |
48403,52540 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
100950,75445 100950 - NagB/RpiA/CoA transferase-like 75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
47005,52777 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | Direct |
51338,51556 51338 - Composite domain of metallo-dependent hydrolases 51556 - Metallo-dependent hydrolases | 0 | Direct |
52540,52058 52540 - P-loop containing nucleoside triphosphate hydrolases 52058 - L domain-like | 0 | Direct |
117916,117916 117916 - Fe-S cluster assembly (FSCA) domain-like 117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
55920,46785 55920 - Creatinase/aminopeptidase 46785 - "Winged helix" DNA-binding domain | 0 | Direct |
49899,63887 49899 - Concanavalin A-like lectins/glucanases 63887 - P-domain of calnexin/calreticulin | 0 | Direct |
101908,56219 101908 - Putative isomerase YbhE 56219 - DNase I-like | 0 | Direct |
88798,50249 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE) 50249 - Nucleic acid-binding proteins | 0 | Direct |
50249,55681 50249 - Nucleic acid-binding proteins 55681 - Class II aaRS and biotin synthetases | 0 | Direct |
51735,56327 51735 - NAD(P)-binding Rossmann-fold domains 56327 - LDH C-terminal domain-like | 0 | Direct |
54980,54980 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | Direct |
53732,52016 53732 - Aconitase iron-sulfur domain 52016 - LeuD/IlvD-like | 0 | Direct |
54585,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
51905,55424 51905 - FAD/NAD(P)-binding domain 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
54747,46906 54747 - Ribosomal L11/L12e N-terminal domain 46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
82171,53474 82171 - DPP6 N-terminal domain-like 53474 - alpha/beta-Hydrolases | 0 | Direct |
56059,52210 56059 - Glutathione synthetase ATP-binding domain-like 52210 - Succinyl-CoA synthetase domains | 0 | Direct |
55785,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like | 0 | Direct |
55781,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
81698,81698 81698 - FF domain 81698 - FF domain | 0 | Direct |
56524,81296 56524 - Oxidoreductase molybdopterin-binding domain 81296 - E set domains | 0 | Direct |
55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | Direct |
57850,54928 57850 - RING/U-box 54928 - RNA-binding domain, RBD | 0 | Direct |
51045,51045 51045 - WW domain 51045 - WW domain | 0 | Direct |
63737,55486 63737 - Leukotriene A4 hydrolase N-terminal domain 55486 - Metalloproteases ("zincins"), catalytic domain | 0 | Direct |
46785,144074 46785 - "Winged helix" DNA-binding domain 144074 - E2F-DP heterodimerization region | 0 | Direct |
53300,81995 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
51735,48179 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
55874,52172 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | Direct |
56219,56219 56219 - DNase I-like 56219 - DNase I-like | 0 | Direct |
47895,52540 47895 - Transducin (alpha subunit), insertion domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,90002 52540 - P-loop containing nucleoside triphosphate hydrolases 90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
81383,54518 81383 - F-box domain 54518 - Tubby C-terminal domain-like | 0 | Direct |
50630,47862 50630 - Acid proteases 47862 - Saposin | 0 | Direct |
52540,47446 52540 - P-loop containing nucleoside triphosphate hydrolases 47446 - Signal peptide-binding domain | 0 | Direct |
81995,81811 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | Direct |
52402,52833 52402 - Adenine nucleotide alpha hydrolases-like 52833 - Thioredoxin-like | 0 | Direct |
82919,53300 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | Direct |
81995,82919 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
81811,82754 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
50156,52096 50156 - PDZ domain-like 52096 - ClpP/crotonase | 0 | Direct |
64356,49447 64356 - SNARE-like 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
46785,158702 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | Direct |
50104,50249 50104 - Translation proteins SH3-like domain 50249 - Nucleic acid-binding proteins | 0 | Direct |
53738,55957 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
102848,54236 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain 54236 - Ubiquitin-like | 0 | Direct |
101238,46934 101238 - XPC-binding domain 46934 - UBA-like | 0 | Direct |
53850,55021 53850 - Periplasmic binding protein-like II 55021 - ACT-like | 0 | Direct |
52425,48173 52425 - Cryptochrome/photolyase, N-terminal domain 48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
51230,47005 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
54534,54534 54534 - FKBP-like 54534 - FKBP-like | 0 | Direct |
50249,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
58014,51064 58014 - Coiled-coil domain of nucleotide exchange factor GrpE 51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
53383,53383 53383 - PLP-dependent transferases 53383 - PLP-dependent transferases | 0 | Direct |
53300,57850 53300 - vWA-like 57850 - RING/U-box | 0 | Direct |
55021,56112 55021 - ACT-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
158702,81296 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | Direct |
158639,63748 158639 - ENT-like 63748 - Tudor/PWWP/MBT | 0 | Direct |
101690,69065 101690 - PAZ domain 69065 - RNase III domain-like | 0 | Direct |
109604,81301 109604 - HD-domain/PDEase-like 81301 - Nucleotidyltransferase | 0 | Direct |
51735,143548 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | Direct |
54909,54909 54909 - Dimeric alpha+beta barrel 54909 - Dimeric alpha+beta barrel | 0 | Direct |
52833,52833 52833 - Thioredoxin-like 52833 - Thioredoxin-like | 0 | Direct |
47473,103506 47473 - EF-hand 103506 - Mitochondrial carrier | 0 | Direct |
88697,52374 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | Direct |
88659,88659 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
49723,48484 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain) 48484 - Lipoxigenase | 0 | Direct |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | Direct |
54534,48452 54534 - FKBP-like 48452 - TPR-like | 0 | Direct |
54160,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48403,57850 48403 - Ankyrin repeat 57850 - RING/U-box | 0 | Direct |
48179,52413 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
52540,48403 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | Direct |
81296,51445 81296 - E set domains 51445 - (Trans)glycosidases | 0 | Direct |
88946,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
55781,47384 55781 - GAF domain-like 47384 - Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
82199,81822 82199 - SET domain 81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
47661,58038 47661 - t-snare proteins 58038 - SNARE fusion complex | 0 | Direct |
46785,54928 46785 - "Winged helix" DNA-binding domain 54928 - RNA-binding domain, RBD | 0 | Direct |
52172,52172 52172 - CheY-like 52172 - CheY-like | 0 | Direct |
55785,55785 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
54160,54160 54160 - Chromo domain-like 54160 - Chromo domain-like | 0 | Direct |
81296,52540 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
143548,55021 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | Direct |
54695,48452 54695 - POZ domain 48452 - TPR-like | 0 | Direct |
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
54695,48452,48452 54695 - POZ domain 48452 - TPR-like 48452 - TPR-like | 0 | DIRECT |
53738,53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
81296,51445,51011 81296 - E set domains 51445 - (Trans)glycosidases 51011 - Glycosyl hydrolase domain | 0 | DIRECT |
51735,143548,55021 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | DIRECT |
54160,52540,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
63411,63411,63411 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
55973,55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
81296,52540,48403 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | DIRECT |
81995,81811,82754 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
50692,54585,52540 50692 - ADC-like 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55785,55781,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like 55781 - GAF domain-like | 0 | DIRECT |
55781,55781,55785 55781 - GAF domain-like 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52540,46785,158702 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
158702,52540,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52833,52833,52833 52833 - Thioredoxin-like 52833 - Thioredoxin-like 52833 - Thioredoxin-like | 0 | DIRECT |
54534,54534,54534 54534 - FKBP-like 54534 - FKBP-like 54534 - FKBP-like | 0 | DIRECT |
88946,88659,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
52283,51735,143548 52283 - Formate/glycerate dehydrogenase catalytic domain-like 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | DIRECT |
50249,57756,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
46785,158702,52540 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54160,54160,52540 54160 - Chromo domain-like 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55781,47384,55874 55781 - GAF domain-like 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
53738,53738,55957 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
55781,55785,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52540,52540,46785 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
53300,81995,81811 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | DIRECT |
81995,82919,53300 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | DIRECT |
50447,54980,54980 50447 - Translation proteins 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | DIRECT |
47364,52540,47446 47364 - Domain of the SRP/SRP receptor G-proteins 52540 - P-loop containing nucleoside triphosphate hydrolases 47446 - Signal peptide-binding domain | 0 | DIRECT |
47384,55874,52172 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | DIRECT |
51735,48179,52413 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
81698,81698,81698 81698 - FF domain 81698 - FF domain 81698 - FF domain | 0 | DIRECT |
46785,158702,81296 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | DIRECT |
54585,52540,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
82919,53300,81995 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
54534,54534,48452 54534 - FKBP-like 54534 - FKBP-like 48452 - TPR-like | 0 | DIRECT |
51230,47005,52777 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | DIRECT |
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
54695,48452,48452 54695 - POZ domain 48452 - TPR-like 48452 - TPR-like | 0 | Direct |
53738,53738,53738 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
81296,51445,51011 81296 - E set domains 51445 - (Trans)glycosidases 51011 - Glycosyl hydrolase domain | 0 | Direct |
51735,143548,55021 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain 55021 - ACT-like | 0 | Direct |
54160,52540,52540 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
63411,63411,63411 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase 63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
55973,55973,55973 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase 55973 - S-adenosylmethionine synthetase | 0 | Direct |
81296,52540,48403 81296 - E set domains 52540 - P-loop containing nucleoside triphosphate hydrolases 48403 - Ankyrin repeat | 0 | Direct |
81995,81811,82754 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
50692,54585,52540 50692 - ADC-like 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55785,55781,55781 55785 - PYP-like sensor domain (PAS domain) 55781 - GAF domain-like 55781 - GAF domain-like | 0 | Direct |
55781,55781,55785 55781 - GAF domain-like 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52540,46785,158702 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like | 0 | Direct |
158702,52540,52540 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52833,52833,52833 52833 - Thioredoxin-like 52833 - Thioredoxin-like 52833 - Thioredoxin-like | 0 | Direct |
54534,54534,54534 54534 - FKBP-like 54534 - FKBP-like 54534 - FKBP-like | 0 | Direct |
88946,88659,88659 88946 - Sigma2 domain of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
52283,51735,143548 52283 - Formate/glycerate dehydrogenase catalytic domain-like 51735 - NAD(P)-binding Rossmann-fold domains 143548 - Serine metabolism enzymes domain | 0 | Direct |
50249,57756,57756 50249 - Nucleic acid-binding proteins 57756 - Retrovirus zinc finger-like domains 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
46785,158702,52540 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54160,54160,52540 54160 - Chromo domain-like 54160 - Chromo domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55781,47384,55874 55781 - GAF domain-like 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
53738,53738,55957 53738 - Phosphoglucomutase, first 3 domains 53738 - Phosphoglucomutase, first 3 domains 55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
55781,55785,55785 55781 - GAF domain-like 55785 - PYP-like sensor domain (PAS domain) 55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52540,52540,46785 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 46785 - "Winged helix" DNA-binding domain | 0 | Direct |
53300,81995,81811 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 81811 - Helical domain of Sec23/24 | 0 | Direct |
81995,82919,53300 81995 - beta-sandwich domain of Sec23/24 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | Direct |
50447,54980,54980 50447 - Translation proteins 54980 - EF-G C-terminal domain-like 54980 - EF-G C-terminal domain-like | 0 | Direct |
47364,52540,47446 47364 - Domain of the SRP/SRP receptor G-proteins 52540 - P-loop containing nucleoside triphosphate hydrolases 47446 - Signal peptide-binding domain | 0 | Direct |
47384,55874,52172 47384 - Homodimeric domain of signal transducing histidine kinase 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52172 - CheY-like | 0 | Direct |
51735,48179,52413 51735 - NAD(P)-binding Rossmann-fold domains 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
81698,81698,81698 81698 - FF domain 81698 - FF domain 81698 - FF domain | 0 | Direct |
46785,158702,81296 46785 - "Winged helix" DNA-binding domain 158702 - Sec63 N-terminal domain-like 81296 - E set domains | 0 | Direct |
54585,52540,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
82919,53300,81995 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like 81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
54534,54534,48452 54534 - FKBP-like 54534 - FKBP-like 48452 - TPR-like | 0 | Direct |
51230,47005,52777 51230 - Single hybrid motif 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52777 - CoA-dependent acyltransferases | 0 | Direct |
Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
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heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
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