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Phenotype Ontology
Like Gene Ontology (GO), phenotypy ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Phenotype ontologies we have incorporated are as follows:

• Disease Ontology (DO) Ontology (DO)
  DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI thesaurus, SNOMED and OMIM.
  
• Human Phenotype (HP) Ontology (HP)
  HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
  
• Mouse Phenotype (MP) Ontology (MP)
  MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
  
• Worm Phenotype (WP) Ontology (WP)
  WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
  
• Yeast Phenotype (YP) Ontology (YP)
  Based on YP which is the major contributor to the Ascomycete phenotype ontology, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
  
• Fly Phenotype (FP) Ontology (FP)
  FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
  
• Fly Anatomy (FA) Ontology (FA)
  FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
  
• Zebrafish Anatomy (ZA) Ontology (ZA)
  ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
  
• Xenopus Anatomy (XA) Ontology (XA)
  XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
  
• Arabidopsis Plant Ontology (AP) Ontology (AP)
  As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
  
• Enzyme Commission (EC) Ontology (EC)
  Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
  
• DrugBank ATC (DB) Ontology (DB)
  In the Anatomical Therapeutic Chemical (ATC) classification system, drugs are classified in groups at five different levels according to the organ or system (1st level, anatomical main group) on which they act and their therapeutic (2nd level, therapeutic subgroup), pharmacological (3rd level, pharmacological subgroup) and chemical properties (4th level, chemical subgroup; 5th level, chemical substance). Only drugs in DrugBank are considered.
  
• UniProtKB KeyWords (KW) Ontology (KW)
  Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
  
• UniProtKB UniPathway (UP) Ontology (UP)
  UP is a fully manually curated resource for the representation and annotation of metabolic pathways, being used as controlled vocabulary for pathway annotation in UniProtKB.
  

Structural Domain Phenotype Ontology and its Annotations
Structural Classification of Proteins (SCOP) classifies evolutionary-related domains into Superfamily level and Family level. Using the phenotype ontologies above, we have generated the domain-centric phenotype annotations, and further identified those phenotype terms which are the most informative to annotate SCOP domains. Promisingly, domain-centric phenotypic annotations can serve as an alternative starting point to explore genotype-phenotype relationships. We provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.

• Structural Domain Disease Ontology (DO) Ontology (SDDO) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DO.txt, and the corresponding ontology:SDDO.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Human Phenotype (HP) Ontology (SDHP) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2HP.txt, and the corresponding ontology:SDHP.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Mouse Phenotype (MP) Ontology (SDMP) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2MP.txt, and the corresponding ontology:SDMP.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Worm Phenotype (WP) Ontology (SDWP) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2WP.txt, and the corresponding ontology:SDWP.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Yeast Phenotype (YP) Ontology (SDYP) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2YP.txt, and the corresponding ontology:SDYP.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Fly Phenotype (FP) Ontology (SDFP) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FP.txt, and the corresponding ontology:SDFP.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Fly Anatomy (FA) Ontology (SDFA) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FA.txt, and the corresponding ontology:SDFA.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Zebrafish Anatomy (ZA) Ontology (SDZA) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2ZA.txt, and the corresponding ontology:SDZA.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Xenopus Anatomy (XA) Ontology (SDXA) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2XA.txt, and the corresponding ontology:SDXA.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Arabidopsis Plant Ontology (AP) Ontology (SDAP) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2AP.txt, and the corresponding ontology:SDAP.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain Enzyme Commission (EC) Ontology (SDEC) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2EC.txt, and the corresponding ontology:SDEC.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain DrugBank ATC (DB) Ontology (SDDB) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DB.txt, and the corresponding ontology:SDDB.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain UniProtKB KeyWords (KW) Ontology (SDKW) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2KW.txt, and the corresponding ontology:SDKW.txt) and mysql tables (Domain2PO.sql.gz).
  
• Structural Domain UniProtKB UniPathway (UP) Ontology (SDUP) and its Annotations:
  For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2UP.txt, and the corresponding ontology:SDUP.txt) and mysql tables (Domain2PO.sql.gz).
  

Supra-domain Phenotype Ontology and its Annotations
Although domain-centric annotations hold great promise in describing phenotypic nature of independent domains, most domains themselves may not just work alone. In multi-domain proteins, they may be combined together to form distinct domain architectures. The recombination of the existing domains is considered as one of major driving forces for phenotypic diversificaation. As an extension, we have also generated supra-domain phenotype ontology and its annotations. Compared to domain-centric phenotype ontology and annotations (SCOP domains at the Superfamily level and Family level), this version focuses on supra-domains and individual SCOP domains ONLY at the Superfamily level. Besides, in terms of individual superfamilies, their annotations from the domain-centric version may be different from those from supra-domains version. Depending on your focus, the former should be used for the consideration of both the Superfamily level and Family level, otherwise the latter should be used if you are interested in domain combinations. Also, we provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.

• Supra-domain Domain Disease Ontology (DO) Ontology (SPDO) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DO.txt, and the corresponding ontology:SPDO.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Human Phenotype (HP) Ontology (SPHO) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2HP.txt, and the corresponding ontology:SPHO.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Mouse Phenotype (MP) Ontology (SPMP) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2MP.txt, and the corresponding ontology:SPMP.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Worm Phenotype (WP) Ontology (SPWP) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2WP.txt, and the corresponding ontology:SPWP.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Yeast Phenotype (YP) Ontology (SPYP) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2YP.txt, and the corresponding ontology:SPYP.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Fly Phenotype (FP) Ontology (SPFP) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FP.txt, and the corresponding ontology:SPFP.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Fly Anatomy (FA) Ontology (SPFA) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FA.txt, and the corresponding ontology:SPFA.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Zebrafish Anatomy (ZA) Ontology (SPZA) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2ZA.txt, and the corresponding ontology:SPZA.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Xenopus Anatomy (XA) Ontology (SPXA) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2XA.txt, and the corresponding ontology:SPXA.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Arabidopsis Plant Ontology (AP) Ontology (SPAP) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2AP.txt, and the corresponding ontology:SPAP.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain Enzyme Commission (EC) Ontology (SPEC) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2EC.txt, and the corresponding ontology:SPEC.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain DrugBank ATC (DB) Ontology (SPDB) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DB.txt, and the corresponding ontology:SPDB.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain UniProtKB KeyWords (KW) Ontology (SPKW) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2KW.txt, and the corresponding ontology:SPKW.txt) and mysql tables (SP2PO.sql.gz).
  
• Supra-domain Domain UniProtKB UniPathway (UP) Ontology (SPUP) and its Annotations:
  For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2UP.txt, and the corresponding ontology:SPUP.txt) and mysql tables (SP2PO.sql.gz).
  

Superfamily domains annotated to this AP term (Not in SDAP)
Highlighted in gray are those with FDR_all>0.001

SCOP term	FDR (all)	Annotation (direct or inherited)
Signal peptide-binding domain	0	DIRECT
Protease propeptides/inhibitors	0	DIRECT
E2F-DP heterodimerization region	0	DIRECT
SH3-domain	0	DIRECT
RraA-like	0	DIRECT
DNA repair protein MutS, domain I	0	DIRECT
Glycoside hydrolase/deacetylase	0	DIRECT
VHP, Villin headpiece domain	0	DIRECT
Lipocalins	0	DIRECT
LysM domain	0	DIRECT
Granulin repeat	0	DIRECT
Head domain of nucleotide exchange factor GrpE	0	DIRECT
TATA-box binding protein-like	0	DIRECT
Composite domain of metallo-dependent hydrolases	0	DIRECT
RuBisCO, small subunit	0	DIRECT
Phosphofructokinase	0	DIRECT
DNA repair protein MutS, domain III	0	DIRECT
Ribosomal L11/L12e N-terminal domain	0	DIRECT
C-terminal, gelsolin-like domain of Sec23/24	0	DIRECT
Cdc48 domain 2-like	0	DIRECT
Ribosomal protein L30p/L7e	0	DIRECT
TGS-like	0	DIRECT
tRNA-binding arm	0	DIRECT
LeuD/IlvD-like	0	DIRECT
Ribosomal protein L31e	0	DIRECT
Phosphoglycerate kinase	0	DIRECT
GHMP Kinase, C-terminal domain	0	DIRECT
lambda repressor-like DNA-binding domains	0	DIRECT
Sec7 domain	0	DIRECT
Creatinase/aminopeptidase	0	DIRECT
Lesion bypass DNA polymerase (Y-family), little finger domain	0	DIRECT
Homocysteine S-methyltransferase	0	DIRECT
N-terminal, heterodimerisation domain of RBP7 (RpoE)	0	DIRECT
Staphylococcal nuclease	0	DIRECT
Putative isomerase YbhE	0	DIRECT
Histidine-containing phosphotransfer domain, HPT domain	0	DIRECT
YrdC/RibB	0	DIRECT
Tautomerase/MIF	0	DIRECT
L9 N-domain-like	0	DIRECT
V-type ATPase subunit E-like	0	DIRECT
Transducin (alpha subunit), insertion domain	0	DIRECT
Tetrapyrrole methylase	0	DIRECT
Ribosomal protein L4	0	DIRECT
Electron transport accessory proteins	0	DIRECT
P-domain of calnexin/calreticulin	0	DIRECT
Single hybrid motif	0	DIRECT
Chelatase	0	DIRECT
FKBP-like	0	DIRECT
PABC (PABP) domain	0	DIRECT
Mitochondrial glycoprotein MAM33-like	0	DIRECT
Clc chloride channel	0	DIRECT
Preprotein translocase SecE subunit	0	DIRECT
Glycosyl hydrolase domain	0	DIRECT
DLC	0	DIRECT
Sigma3 and sigma4 domains of RNA polymerase sigma factors	0	DIRECT
NAP-like	0	DIRECT
Prokaryotic type I DNA topoisomerase	0	DIRECT
Profilin (actin-binding protein)	0	DIRECT
Zn-finger domain of Sec23/24	0	DIRECT
Pentapeptide repeat-like	0	DIRECT
BolA-like	0	DIRECT
RuBisCo LSMT C-terminal, substrate-binding domain	0	DIRECT
ADC synthase	0	DIRECT
Ribosomal protein L19 (L19e)	0	DIRECT
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	0	DIRECT
Saposin	0	DIRECT
Folate-binding domain	0	DIRECT
ALDH-like	0	DIRECT
Peptidyl-tRNA hydrolase-like	0	DIRECT
Expressed protein At2g23090/F21P24.15	0	DIRECT
Fe,Mn superoxide dismutase (SOD), N-terminal domain	0	DIRECT
Glycolipid transfer protein, GLTP	0	DIRECT
Ribosomal protein L39e	0	DIRECT
C-terminal autoproteolytic domain of nucleoporin nup98	0	DIRECT
Hypothetical protein YjiA, C-terminal domain	0	DIRECT
TK C-terminal domain-like	0	DIRECT
Metallo-dependent hydrolases	0	DIRECT
LuxS/MPP-like metallohydrolase	0	DIRECT
Cu,Zn superoxide dismutase-like	0	DIRECT
LEA14-like	0	DIRECT
Leukotriene A4 hydrolase N-terminal domain	0	DIRECT
AMPKBI-like	0	DIRECT
Inosine monophosphate dehydrogenase (IMPDH)	0	DIRECT
Ribosomal protein L13	0	DIRECT
beta-N-acetylhexosaminidase-like domain	0	DIRECT
Phosphoglucomutase, C-terminal domain	0	DIRECT
Ribosomal protein S19	0	DIRECT
LDH C-terminal domain-like	0	DIRECT
Radical SAM enzymes	0	DIRECT
Chorismate mutase II	0	DIRECT
N-terminal domain of the delta subunit of the F1F0-ATP synthase	0	DIRECT
PAP/Archaeal CCA-adding enzyme, C-terminal domain	0	DIRECT
Ligand-binding domain in the NO signalling and Golgi transport	0	DIRECT
FF domain	0	DIRECT
Phosphoglucomutase, first 3 domains	0	DIRECT
GlnB-like	0	DIRECT
Serine metabolism enzymes domain	0	DIRECT
FAH	0	DIRECT
SH2 domain	0	DIRECT
Sigma2 domain of RNA polymerase sigma factors	0	DIRECT
Ribosomal protein L10-like	0	DIRECT
Cation efflux protein cytoplasmic domain-like	0	DIRECT
Diaminopimelate epimerase-like	0	DIRECT
S13-like H2TH domain	0	DIRECT
Ribosomal protein S2	0	DIRECT
Preprotein translocase SecY subunit	0	DIRECT
beta-carbonic anhydrase, cab	0	DIRECT
DNA repair protein MutS, domain II	0	DIRECT
Cation efflux protein transmembrane domain-like	0	DIRECT
Tetrahydrobiopterin biosynthesis enzymes-like	0	DIRECT
Ribosomal protein L16p/L10e	0	DIRECT
ssDNA-binding transcriptional regulator domain	0	DIRECT
GroEL-intermediate domain like	0	DIRECT
LanC-like	0	DIRECT
AlbA-like	0	DIRECT
GroEL equatorial domain-like	0	DIRECT
GroEL apical domain-like	0	DIRECT
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	0	DIRECT
Fe,Mn superoxide dismutase (SOD), C-terminal domain	0	DIRECT
Flavoproteins	0	DIRECT
MOSC N-terminal domain-like	0	DIRECT
RuvA domain 2-like	0	DIRECT
Cytochrome c	0	DIRECT
FAD-dependent thiol oxidase	0	DIRECT
Nicotinate/Quinolinate PRTase C-terminal domain-like	0	DIRECT
Casein kinase II beta subunit	0	DIRECT
Aconitase iron-sulfur domain	0	DIRECT
eIF1-like	0	DIRECT
Ricin B-like lectins	0	DIRECT
FtsH protease domain-like	0	DIRECT
Seven-hairpin glycosidases	0	DIRECT
Succinyl-CoA synthetase domains	0	DIRECT
CYTH-like phosphatases	0	DIRECT
Inorganic pyrophosphatase	0	DIRECT
Ribosomal protein L11, C-terminal domain	0	DIRECT
Carbohydrate phosphatase	0	DIRECT
Glutamine synthetase, N-terminal domain	0	DIRECT
Thiolase-like	0	DIRECT
alpha-helical ferredoxin	0	DIRECT
R3H domain	0	DIRECT
Poly A polymerase C-terminal region-like	0	DIRECT
PGBD-like	0	DIRECT
Glutamyl tRNA-reductase dimerization domain	0	DIRECT
Families 57/38 glycoside transferase middle domain	0	DIRECT
Peptide methionine sulfoxide reductase	0	DIRECT
Glutamyl tRNA-reductase catalytic, N-terminal domain	0	DIRECT
Oxidoreductase molybdopterin-binding domain	0	DIRECT
SMR domain-like	0	DIRECT
Prokaryotic ribosomal protein L17	0	DIRECT
MurD-like peptide ligases, catalytic domain	0	DIRECT
Creatinase/prolidase N-terminal domain	0	DIRECT
Cullin homology domain	0	DIRECT
DNA clamp	0	DIRECT
Ribosomal protein S6	0	DIRECT
6-phosphogluconate dehydrogenase C-terminal domain-like	0	DIRECT
D-ribose-5-phosphate isomerase (RpiA), lid domain	0	DIRECT
Sec63 N-terminal domain-like	0	DIRECT
PDZ domain-like	0	DIRECT
Magnesium transport protein CorA, transmembrane region	0	DIRECT
Nitrite and sulphite reductase 4Fe-4S domain-like	0	DIRECT
MurD-like peptide ligases, peptide-binding domain	0	DIRECT
Peptidase/esterase 'gauge' domain	0	DIRECT
Ribosomal proteins S24e, L23 and L15e	0	DIRECT
Purple acid phosphatase, N-terminal domain	0	DIRECT
Ribosomal protein S8	0	DIRECT
GAF domain-like	0	DIRECT
Ribosomal protein L29 (L29p)	0	DIRECT
ATP synthase (F1-ATPase), gamma subunit	0	DIRECT
Lipoxigenase	0	DIRECT
SIS domain	0	DIRECT
Ribosomal protein L14	0	DIRECT
NSFL1 (p97 ATPase) cofactor p47, SEP domain	0	DIRECT
Cryptochrome/photolyase FAD-binding domain	0	DIRECT
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	0	DIRECT
Alpha subunit of glutamate synthase, C-terminal domain	0	DIRECT
S-adenosylmethionine synthetase	0	DIRECT
Smc hinge domain	0	DIRECT
ADC-like	0	DIRECT
Glycerol-3-phosphate (1)-acyltransferase	0	DIRECT
FAD/NAD-linked reductases, dimerisation (C-terminal) domain	0	DIRECT
Tim10-like	0	DIRECT
Acyl-CoA binding protein	0	DIRECT
Helical domain of Sec23/24	0	DIRECT
Glutamine synthetase/guanido kinase	0	DIRECT
Nicotinate/Quinolinate PRTase N-terminal domain-like	0	DIRECT
RibA-like	0	DIRECT
Pentein	0	DIRECT
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	0	DIRECT
NHL repeat	0	DIRECT
SufE/NifU	0	DIRECT
HesB-like domain	0	DIRECT
ClpP/crotonase	0	DIRECT
Heme-dependent catalase-like	0	DIRECT
Coiled-coil domain of nucleotide exchange factor GrpE	0	DIRECT
Annexin	0	DIRECT
Surp module (SWAP domain)	0	DIRECT
Dimeric alpha+beta barrel	0	DIRECT
XPC-binding domain	0	DIRECT
Globin-like	0	DIRECT
Restriction endonuclease-like	0	DIRECT
NAD(P)-binding Rossmann-fold domains	0.00497	INHERITED FROM: androecium || carpel
Mitochondrial carrier	0.008871	INHERITED FROM: pedicel || stamen || inflorescence branch || carpel
Aldolase	0.01275	INHERITED FROM: stamen || inflorescence meristem || corolla || petal
Metallo-hydrolase/oxidoreductase	0.03744	INHERITED FROM: pedicel || inflorescence branch
Glutathione synthetase ATP-binding domain-like	0.04415	INHERITED FROM: corolla || petal
Cupredoxins	0.06641	INHERITED FROM: petal vascular system || sepal vascular system || filament || flower vascular system
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	0.1088	INHERITED FROM: androecium || pedicel || stamen || inflorescence branch || corolla || petal || inflorescence axis
Calcium ATPase, transduction domain A	0.1142	INHERITED FROM: anther
Calcium ATPase, transmembrane domain M	0.1142	INHERITED FROM: anther
Nucleotidylyl transferase	0.1595	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
Eukaryotic type KH-domain (KH-domain type I)	0.1764	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
Thioredoxin-like	0.1881	INHERITED FROM: androecium || carpel
Amidase signature (AS) enzymes	0.422	INHERITED FROM: reproductive bud || flower bud
Ribokinase-like	0.4305	INHERITED FROM: reproductive bud || flower bud
RNA-binding domain, RBD	0.6121	INHERITED FROM: gynoecium || androecium || pedicel || inflorescence branch || corolla || carpel || petal || inflorescence axis
Homeodomain-like	0.6835	INHERITED FROM: style || anther || ovary replum
Chaperone J-domain	0.7608	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
ARM repeat	0.8063	INHERITED FROM: reproductive bud || flower bud
Subtilisin-like	0.8302	INHERITED FROM: style
UDP-Glycosyltransferase/glycogen phosphorylase	0.9655	INHERITED FROM: reproductive bud || flower bud
HLH, helix-loop-helix DNA-binding domain	1	INHERITED FROM: portion of transmitting tissue
Clavaminate synthase-like	1	INHERITED FROM: flower vascular system
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	INHERITED FROM: style || filament
RNI-like	1	INHERITED FROM: anther
DNA-binding pseudobarrel domain	1	INHERITED FROM: plant ovary || ovary placenta
Terpenoid synthases	1	INHERITED FROM: stigma || filament
Terpenoid cyclases/Protein prenyltransferases	1	INHERITED FROM: stigma || filament

Family domains annotated to this AP term (Not in SDAP)
Highlighted in gray are those with FDR_all>0.001

SCOP term	FDR (all)	Annotation (direct or inherited)
GroEL-like chaperone, apical domain	0	DIRECT
DNA repair glycosylase, 2 C-terminal domains	0	DIRECT
N-terminal, heterodimerisation domain of RBP7 (RpoE)	0	DIRECT
Phosphoglucomutase, C-terminal domain	0	DIRECT
FF domain	0	DIRECT
Glycosyl hydrolases family 32 C-terminal domain	0	DIRECT
Pseudouridine synthase II TruB	0	DIRECT
Heme-dependent catalases	0	DIRECT
AMPKBI-like	0	DIRECT
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	0	DIRECT
Plant lipoxigenases	0	DIRECT
alpha-mannosidase, C-terminal domain	0	DIRECT
MMP N-terminal domain	0	DIRECT
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain	0	DIRECT
Matrix metalloproteases, catalytic domain	0	DIRECT
Lipoxigenase N-terminal domain	0	DIRECT
DNase I-like	0	DIRECT
Glycerol-3-phosphate dehydrogenase	0	DIRECT
Aminoacid dehydrogenases	0	DIRECT
NADPH-cytochrome p450 reductase-like	0	DIRECT
Cation efflux protein cytoplasmic domain-like	0	DIRECT
Purple acid phosphatase, N-terminal domain	0	DIRECT
LIM domain	0	DIRECT
gamma-carbonic anhydrase-like	0	DIRECT
Macro domain	0	DIRECT
SH2 domain	0	DIRECT
Aminomethyltransferase folate-binding domain	0	DIRECT
Sigma4 domain	0	DIRECT
ENTH domain	0	DIRECT
Pathogenesis-related protein 10 (PR10)-like	0	DIRECT
NAD kinase-like	0	DIRECT
Phosphoenolpyruvate carboxylase	0	DIRECT
LeuD-like	0	DIRECT
Prolyl oligopeptidase, N-terminal domain	0	DIRECT
Allosteric chorismate mutase	0	DIRECT
Tim10/DDP	0	DIRECT
G domain-linked domain	0	DIRECT
ATP synthase (F1-ATPase), gamma subunit	0	DIRECT
NSFL1 (p97 ATPase) cofactor p47, SEP domain	0	DIRECT
Poly A polymerase C-terminal region-like	0	DIRECT
Glycerophosphoryl diester phosphodiesterase	0	DIRECT
Trunk domain of Sec23/24	0	DIRECT
RWD domain	0	DIRECT
CoA-binding domain	0	DIRECT
PAPS reductase-like	0	DIRECT
(Glycosyl)asparaginase	0	DIRECT
Spermidine synthase	0	DIRECT
Ribosomal protein L29 (L29p)	0	DIRECT
HMGL-like	0	DIRECT
MPP-like	0	DIRECT
Leukotriene A4 hydrolase N-terminal domain	0	DIRECT
Ribosomal protein L4	0	DIRECT
Homoserine dehydrogenase-like	0	DIRECT
Group II chaperonin (CCT, TRIC), intermediate domain	0	DIRECT
Glycosyl hydrolases family 35 catalytic domain	0	DIRECT
HAT/Suf repeat	0	DIRECT
UDP-glucose pyrophosphorylase	0	DIRECT
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB	0	DIRECT
Coiled-coil domain of nucleotide exchange factor GrpE	0	DIRECT
Reductases	0	DIRECT
Glutamyl tRNA-reductase catalytic, N-terminal domain	0	DIRECT
E2F dimerization segment	0	DIRECT
V-type ATPase subunit E	0	DIRECT
Group II chaperonin (CCT, TRIC), apical domain	0	DIRECT
FAD-dependent thiol oxidase	0	DIRECT
SCF ubiquitin ligase complex WHB domain	0	DIRECT
Cdc48 domain 2-like	0	DIRECT
Rps19E-like	0	DIRECT
beta-Phosphoglucomutase-like	0	DIRECT
S-adenosylmethionine synthetase	0	DIRECT
ZZ domain	0	DIRECT
Tetramerization domain of potassium channels	0	DIRECT
Methionine aminopeptidase, insert domain	0	DIRECT
RuBisCO, small subunit	0	DIRECT
XPF/Rad1/Mus81 nuclease	0	DIRECT
Glutamine synthetase, N-terminal domain	0	DIRECT
GABARAP-like	0	DIRECT
C-terminal autoproteolytic domain of nucleoporin nup98	0	DIRECT
Poly A polymerase head domain-like	0	DIRECT
Nitrite and sulphite reductase 4Fe-4S domain-like	0	DIRECT
Transcriptional coactivator PC4 C-terminal domain	0	DIRECT
Mitochondrial glycoprotein MAM33-like	0	DIRECT
PDI-like	0	DIRECT
glucose-1-phosphate thymidylyltransferase	0	DIRECT
HesB-like domain	0	DIRECT
Swaposin	0	DIRECT
La domain	0	DIRECT
D-ribose-5-phosphate isomerase (RpiA), catalytic domain	0	DIRECT
GAF domain	0	DIRECT
PaaI/YdiI-like	0	DIRECT
Branched-chain alpha-keto acid dehydrogenase Pyr module	0	DIRECT
L23p	0	DIRECT
C-terminal, gelsolin-like domain of Sec23/24	0	DIRECT
MioX-like	0	DIRECT
Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain	0	DIRECT
Gtf glycosyltransferase	0	DIRECT
Starch-binding domain	0	DIRECT
Aconitase iron-sulfur domain	0	DIRECT
Ferritin	0	DIRECT
Cullin homology domain	0	DIRECT
Myf domain	0	DIRECT
FAH	0	DIRECT
Plant stress-induced protein	0	DIRECT
Ribosomal protein S6	0	DIRECT
Ribosomal protein S13	0	DIRECT
AlkB-like	0	DIRECT
Annexin	0	DIRECT
Carboxylesterase	0	DIRECT
Hypothetical protein HI1317	0	DIRECT
Ubiquitin carboxyl-terminal hydrolase UCH-L	0	DIRECT
DLC	0	DIRECT
Ribosomal protein L30p/L7e	0	DIRECT
Transcriptional factor tubby, C-terminal domain	0	DIRECT
D-ribose-5-phosphate isomerase (RpiA), lid domain	0	DIRECT
Putative glucosidase YicI, domain 3	0	DIRECT
Ribosomal L11/L12e N-terminal domain	0	DIRECT
rRNA adenine dimethylase-like	0	DIRECT
Ribosomal protein S19	0	DIRECT
SH3-domain	0	DIRECT
LysM domain	0	DIRECT
Glucose 6-phosphate dehydrogenase-like	0	DIRECT
MoCo carrier protein-like	0	DIRECT
Cryptochrome/photolyase FAD-binding domain	0	DIRECT
SWIRM domain	0	DIRECT
NOL1/NOP2/sun	0	DIRECT
Subtilase propeptides/inhibitors	0	DIRECT
RNA-polymerase beta-prime	0	DIRECT
R3H domain	0	DIRECT
Predicted hydrolases Cof	0	DIRECT
Mo25 protein	0	DIRECT
Cytidylyltransferase	0	DIRECT
HEAT repeat	0	DIRECT
Succinyl-CoA synthetase, beta-chain, N-terminal domain	0	DIRECT
Nuclear movement domain	0	DIRECT
RraA-like	0	DIRECT
Homocysteine S-methyltransferase	0	DIRECT
Chromo barrel domain	0	DIRECT
B56-like	0	DIRECT
Crotonase-like	0	DIRECT
NAP-like	0	DIRECT
Ribosomal protein S27e	0	DIRECT
Ribosomal protein L10e	0	DIRECT
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	0	DIRECT
BAR domain	0	DIRECT
RibA-like	0	DIRECT
Internalin LRR domain	0	DIRECT
DNA repair protein MutS, domain III	0	DIRECT
DNA polymerase processivity factor	0	DIRECT
Amylase, catalytic domain	0	DIRECT
Arginine methyltransferase	0	DIRECT
Cystatins	0	DIRECT
BolA-like	0	DIRECT
Ribosomal protein S15	0	DIRECT
LON domain-like	0	DIRECT
Rubredoxin	0	DIRECT
Transducin (alpha subunit), insertion domain	0	DIRECT
COMT-like	0	DIRECT
ATP sulfurylase N-terminal domain	0	DIRECT
Glutamine synthetase catalytic domain	0	DIRECT
MIF-related	0	DIRECT
Ran-binding domain	0	DIRECT
Glycosyl hydrolases family 32 N-terminal domain	0	DIRECT
DNA repair protein MutS, domain I	0	DIRECT
Creatinase/aminopeptidase	0	DIRECT
Chalcone synthase-like	0	DIRECT
Class-II DAHP synthetase	0	DIRECT
beta-N-acetylhexosaminidase catalytic domain	0	DIRECT
Peptidyl-tRNA hydrolase-like	0	DIRECT
Prokaryotic ribosomal protein L17	0	DIRECT
Smr domain	0	DIRECT
Eps15 homology domain (EH domain)	0	DIRECT
SerA intervening domain-like	0	DIRECT
Clc chloride channel	0	DIRECT
Ring hydroxylating alpha subunit ISP domain	0	DIRECT
Receiver domain of the ethylene receptor	0	DIRECT
Sigma2 domain of RNA polymerase sigma factors	0	DIRECT
Ribosomal protein L13	0	DIRECT
Casein kinase II beta subunit	0	DIRECT
Clp protease, ClpP subunit	0	DIRECT
Preprotein translocase SecE subunit	0	DIRECT
Cullin repeat	0	DIRECT
Fe,Mn superoxide dismutase (SOD), C-terminal domain	0	DIRECT
alpha-mannosidase, domain 2	0	DIRECT
RNA methyltransferase FtsJ	0	DIRECT
Ribosomal protein S8	0	DIRECT
Choline kinase	0	DIRECT
Inosine monophosphate dehydrogenase (IMPDH)	0	DIRECT
RNB domain-like	0	DIRECT
Cu,Zn superoxide dismutase-like	0	DIRECT
5' nucleotidase-like	0	DIRECT
Ribosomal protein L11, C-terminal domain	0	DIRECT
6-phosphogluconate dehydrogenase-like, N-terminal domain	0	DIRECT
Gelsolin-like	0	DIRECT
Prokaryotic proteases	0	DIRECT
MYND zinc finger	0	DIRECT
Poly(A) polymerase, PAP, middle domain	0	DIRECT
Magnesium transport protein CorA, transmembrane region	0	DIRECT
Cell cycle transcription factor e2f-dp	0	DIRECT
Acyl-ACP thioesterase-like	0	DIRECT
Lactate & malate dehydrogenases, C-terminal domain	0	DIRECT
alpha-Amylases, C-terminal beta-sheet domain	0	DIRECT
Acyl-CoA binding protein	0	DIRECT
Oxidoreductase molybdopterin-binding domain	0	DIRECT
alpha-mannosidase	0	DIRECT
Ribosomal protein L14	0	DIRECT
P-domain of calnexin/calreticulin	0	DIRECT
Pirin-like	0	DIRECT
Dihydrodipicolinate reductase-like	0	DIRECT
Hexokinase	0	DIRECT
Lesion bypass DNA polymerase (Y-family), catalytic domain	0	DIRECT
Enolase	0	DIRECT
NadC N-terminal domain-like	0	DIRECT
RNase Z-like	0	DIRECT
Cyclin A/CDK2-associated p19, Skp2	0	DIRECT
Fe,Mn superoxide dismutase (SOD), N-terminal domain	0	DIRECT
Adenosine-5'phosphosulfate kinase (APS kinase)	0	DIRECT
Sec7 domain	0	DIRECT
RuBisCo LSMT C-terminal, substrate-binding domain	0	DIRECT
AMPK-beta glycogen binding domain-like	0	DIRECT
Phosphorelay protein-like	0	DIRECT
Inorganic pyrophosphatase	0	DIRECT
Tail specific protease, catalytic domain	0	DIRECT
Cytidylytransferase	0	DIRECT
Glyoxalase I (lactoylglutathione lyase)	0	DIRECT
Folylpolyglutamate synthetase	0	DIRECT
Sec63 C-terminal domain-like	0	DIRECT
Galactosyltransferase LgtC	0	DIRECT
RelA/SpoT domain	0	DIRECT
Universal stress protein-like	0	DIRECT
Glycolipid transfer protein, GLTP	0	DIRECT
GroES	0	DIRECT
Alpha subunit of glutamate synthase, C-terminal domain	0	DIRECT
Class I alpha-1;2-mannosidase, catalytic domain	0	DIRECT
FtsH protease domain-like	0	DIRECT
YicI catalytic domain-like	0	DIRECT
Smc hinge domain	0	DIRECT
Succinyl-CoA synthetase domains	0	DIRECT
Cdc48 N-terminal domain-like	0	DIRECT
monodomain cytochrome c	0	DIRECT
VHP, Villin headpiece domain	0	DIRECT
Peptide methionine sulfoxide reductase	0	DIRECT
GroEL-like chaperone, intermediate domain	0	DIRECT
Granulin repeat	0	DIRECT
LEA14-like	0	DIRECT
Group II chaperonin (CCT, TRIC), ATPase domain	0	DIRECT
Gastric lipase	0	DIRECT
Staphylococcal nuclease	0	DIRECT
Surp module (SWAP domain)	0	DIRECT
Cytochrome b5	0	DIRECT
Zn-finger domain of Sec23/24	0	DIRECT
Profilin (actin-binding protein)	0	DIRECT
Cytochrome p450 reductase N-terminal domain-like	0	DIRECT
Inositol monophosphatase/fructose-1,6-bisphosphatase-like	0	DIRECT
N-type ATP pyrophosphatases	0	DIRECT
IPP isomerase-like	0	DIRECT
Thioesterases	0	DIRECT
Prolyl oligopeptidase, C-terminal domain	0	DIRECT
beta-carbonic anhydrase, cab	0	DIRECT
Thioredoxin-like 2Fe-2S ferredoxin	0	DIRECT
Thiolase-related	0	DIRECT
Shikimate kinase (AroK)	0	DIRECT
GlmU C-terminal domain-like	0	DIRECT
Signal peptide-binding domain	0	DIRECT
D-ribulose-5-phosphate 3-epimerase	0	DIRECT
Cation efflux protein transmembrane domain-like	0	DIRECT
Poly(A) polymerase, PAP, N-terminal domain	0	DIRECT
ALDH-like	0	DIRECT
Exostosin	0	DIRECT
NadC C-terminal domain-like	0	DIRECT
2Fe-2S ferredoxin-related	0	DIRECT
Sedlin (SEDL)	0	DIRECT
Purple acid phosphatase-like	0	DIRECT
Head domain of nucleotide exchange factor GrpE	0	DIRECT
PdxS-like	0	DIRECT
Ribosomal protein L3	0	DIRECT
Plant transcriptional regulator PBF-2	0	DIRECT
Ribosomal protein L10-like	0	DIRECT
Ribosomal protein L19 (L19e)	0	DIRECT
Poly(ADP-ribose) polymerase, C-terminal domain	0	DIRECT
Phosphofructokinase	0	DIRECT
NHL repeat	0	DIRECT
CAT-like	0	DIRECT
Anti-sigma factor antagonist SpoIIaa	0	DIRECT
Transcription factor IIB (TFIIB), core domain	0	DIRECT
Ribosomal protein L39e	0	DIRECT
GHMP Kinase, N-terminal domain	0	DIRECT
Class I aldolase	0	DIRECT
Molybdenum-containing oxidoreductases-like dimerisation domain	0	DIRECT
FucT-like	0	DIRECT
Calnexin/calreticulin	0	DIRECT
1,3-glucuronyltransferase	0	DIRECT
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain	0	DIRECT
WrbA-like	0	DIRECT
NifU/IscU domain	0	DIRECT
GDI-like N domain	0	DIRECT
GroEL chaperone, ATPase domain	0	DIRECT
Hypothetical protein At2g34160	0	DIRECT
Hypothetical protein YjiA, C-terminal domain	0	DIRECT
Pectin methylesterase	0	DIRECT
BphP N-terminal domain-like	0	DIRECT
eIF1-like	0	DIRECT
STAR domain	0	DIRECT
Biotinyl/lipoyl-carrier proteins and domains	0	DIRECT
Phosphoribulokinase/pantothenate kinase	0	DIRECT
PhzC/PhzF-like	0	DIRECT
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	0	DIRECT
Prokaryotic type I DNA topoisomerase	0	DIRECT
ATP sulfurylase catalytic domain	0	DIRECT
Cell cycle arrest protein BUB3	0	DIRECT
PUA domain	0	DIRECT
PCI domain (PINT motif)	0	DIRECT
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	0	DIRECT
N-acetyl-l-glutamate kinase	0	DIRECT
RhoGDI-like	0	DIRECT
HAL/PAL-like	0	DIRECT
Phytochrome-specific domain	0	DIRECT
Poly(A) polymerase, PAP, C-terminal domain	0	DIRECT
FAD/NAD-linked reductases, dimerisation (C-terminal) domain	0	DIRECT
Biotin dependent carboxylase carboxyltransferase domain	0	DIRECT
Ribosomal protein L37e	0	DIRECT
EDF1-like	0	DIRECT
SufE-like	0	DIRECT
Ribosomal protein S2	0	DIRECT
Glyoxalase II (hydroxyacylglutathione hydrolase)	0	DIRECT
TRM1-like	0	DIRECT
Pentapeptide repeats	0	DIRECT
Tetrapyrrole methylase	0	DIRECT
FKBP immunophilin/proline isomerase	0	DIRECT
ADC synthase	0	DIRECT
XPC-binding domain	0	DIRECT
Phosphoglucomutase, first 3 domains	0	DIRECT
beta-sandwich domain of Sec23/24	0	DIRECT
Phosphoglycerate kinase	0	DIRECT
Malic enzyme N-domain	0	DIRECT
Helical domain of Sec23/24	0	DIRECT
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain	0	DIRECT
Molybdenum cofactor biosynthesis protein MoeB	0	DIRECT
Ribosomal protein L31e	0	DIRECT
NADPH-cytochrome p450 reductase FAD-binding domain-like	0	DIRECT
Preprotein translocase SecY subunit	0	DIRECT
eIF5a N-terminal domain-like	0	DIRECT
Leukotriene A4 hydrolase catalytic domain	0	DIRECT
PABC (PABP) domain	0	DIRECT
LDH N-terminal domain-like	0	DIRECT
Protein prenyltransferases	0	DIRECT
Sec63 N-terminal domain	0	DIRECT
YicI N-terminal domain-like	0	DIRECT
Homeodomain	0.004308	INHERITED FROM: style || filament
Mitochondrial carrier	0.01214	INHERITED FROM: pedicel || stamen || inflorescence branch || carpel
Nitrogenase iron protein-like	0.08139	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
Multidomain cupredoxins	0.1083	INHERITED FROM: petal vascular system || sepal vascular system || filament || flower vascular system
Calcium ATPase, transduction domain A	0.1389	INHERITED FROM: anther
Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	0.1827	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
Eukaryotic type KH-domain (KH-domain type I)	0.1879	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
Tandem AAA-ATPase domain	0.1884	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
G proteins	0.2159	INHERITED FROM: gynoecium || carpel
Canonical RBD	0.3776	INHERITED FROM: sepal || gynoecium || androecium || pedicel || inflorescence branch || corolla || carpel || petal || calyx || inflorescence axis
Meta-cation ATPase, catalytic domain P	0.3797	INHERITED FROM: anther
Cold shock DNA-binding domain-like	0.4089	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
Amidase signature (AS) enzymes	0.4202	INHERITED FROM: reproductive bud || flower bud
Glycosyl transferases group 1	0.455	INHERITED FROM: reproductive bud || flower bud
Ribokinase-like	0.5956	INHERITED FROM: reproductive bud || flower bud
Chaperone J-domain	0.8207	INHERITED FROM: pedicel || inflorescence branch || inflorescence axis
Subtilases	0.8593	INHERITED FROM: style
B3 DNA binding domain	0.9228	INHERITED FROM: plant ovary || ovary placenta
U-box	0.9489	INHERITED FROM: reproductive bud || flower bud
Myb/SANT domain	1	INHERITED FROM: anther wall tapetum
Plant lipid-transfer and hydrophobic proteins	1	INHERITED FROM: style || filament
Terpenoid cyclase C-terminal domain	1	INHERITED FROM: stigma || filament
HLH, helix-loop-helix DNA-binding domain	1	INHERITED FROM: portion of transmitting tissue
Penicillin synthase-like	1	INHERITED FROM: flower vascular system
Terpenoid cyclase N-terminal domain	1	INHERITED FROM: stigma || filament