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Plant ANatomical entity (PAN): root epidermal cell

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + 3:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + 2:   epidermis [PO:0005679] <12>(334|497) (335|211|73)
+ + 2:   root system [PO:0025025] <3>(172|277) (175|127|50)
+ + 2:   plant cell [PO:0009002] <33>(418|600) (419|264|86)
+ 1:   root epidermis [PO:0006036] <3>(12|9) (12|2|0)
+ 1:   epidermal cell [PO:0004013] <2>(326|485) (326|207|73)
0:   root epidermal cell [PO:0025164] <3>(11|8) (11|2|0)
- 1:   non-hair root epidermal cell [PO:0000263](1|0) (1|0|0)
- 1:   root hair cell [PO:0000256](4|4) (4|0|0)
- 1:   trichoblast [PO:0000262](3|2) (3|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cysteine-rich domain0.000002475Direct
Ammonium transporter0.000003882Direct
HLH, helix-loop-helix DNA-binding domain0.0003925Direct
Cullin repeat-like0.0004788Direct
SAICAR synthase-like0.0005162Direct
Concanavalin A-like lectins/glucanases0.0006025Direct
PR-1-like0.0006465Direct
Heme-dependent peroxidases0.002193Inherited
DNase I-like0.003245Inherited
Adenine nucleotide alpha hydrolases-like0.007153Inherited
Homeodomain-like0.1808Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Glycosyl hydrolases family 160.00000003303Direct
Ammonium transporter0.000003089Direct
Exocyst complex component0.00007746Direct
Inositol polyphosphate 5-phosphatase (IPP5)0.000129Direct
Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta0.0001832Direct
HLH, helix-loop-helix DNA-binding domain0.0003147Direct
PR-1-like0.0004307Direct
CCP-like0.001586Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cysteine-rich domain0.000001924Direct
Ammonium transporter0.00000302Direct
HLH, helix-loop-helix DNA-binding domain0.0003094Direct
Cullin repeat-like0.0003778Direct
SAICAR synthase-like0.0004075Direct
Concanavalin A-like lectins/glucanases0.0004761Direct
PR-1-like0.000511Direct
Heme-dependent peroxidases0.001747Inherited
DNase I-like0.002594Inherited
Adenine nucleotide alpha hydrolases-like0.005768Inherited
Homeodomain-like0.1619Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57889,57889
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.00001091Direct
    101148,51126
  • 101148 - Plant invertase/pectin methylesterase inhibitor
  • 51126 - Pectin lyase-like
  • 0.0008853Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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