SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): reproductive shoot apex

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   plant anatomical entity [PO:0025131] <3>
+ + + + + + 6:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + + + 5:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + + + 5:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + + 4:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + + + 4:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + + 3:   shoot system [PO:0009006] <18>(516|705) (517|311|98)
+ + + 3:   plant axis [PO:0025004] <12>(241|376) (242|173|62)
+ + 2:   shoot axis [PO:0025029] <25>(198|318) (199|150|55)
+ 1:   shoot apex [PO:0000037] <6>(161|263) (162|124|46)
0:   reproductive shoot apex [PO:0025222] <3>(6|4) (6|1|0)
- 1:   floral organ primordium [PO:0025477] <10>(1|1) (1|0|0)
- 1:   bract primordium [PO:0025487] <2>(0|0) (0|0|0)
- 1:   reproductive shoot apical meristem [PO:0008028] <2>(3|2) (3|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0000000001167Direct
Bet v1-like0.0000004789Direct
DNA-binding pseudobarrel domain0.00006122Direct
Histone-fold0.00007921Direct
SRF-like0.0001317Direct
beta-beta-alpha zinc fingers0.0002415Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00000000005439Direct
Nucleosome core histones0.000003563Direct
B3 DNA binding domain0.00005127Direct
SRF-like0.0001388Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000000009014Direct
Bet v1-like0.0000003717Direct
DNA-binding pseudobarrel domain0.00004789Direct
Histone-fold0.00006201Direct
SRF-like0.0001033Direct
beta-beta-alpha zinc fingers0.0001899Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55961,55961
  • 55961 - Bet v1-like
  • 55961 - Bet v1-like
  • 0.00002422Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)