SUPERFAMILY 1.75 HMM library and genome assignments server

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Disease Ontology (DO): pervasive developmental disorder

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   disease [DOID:4] <8>
+ + 2:   disease of mental health [DOID:150] <12>(23|30) (24|14|4)
+ 1:   developmental disorder of mental health [DOID:0060037] <2>(8|8) (8|2|0)
0:   pervasive developmental disorder [DOID:0060040] <3>(4|5) (4|2|0)
- 1:   autism spectrum disorder [DOID:0060041] <3>(3|4) (3|2|0)
- 1:   Rett syndrome [DOID:1206](1|1) (1|0|0)
- 1:   childhood disintegrative disease [DOID:13487](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Neurotransmitter-gated ion-channel transmembrane pore0.02238Inherited
Nicotinic receptor ligand binding domain-like0.02238Inherited
Periplasmic binding protein-like I0.1535Inherited
HLH, helix-loop-helix DNA-binding domain0.4869Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Acetylcholinesterase-like0.00006318Direct
Neurotransmitter-gated ion-channel transmembrane pore0.01422Inherited
Nicotinic receptor ligand binding domain-like0.01422Inherited
L-arabinose binding protein-like0.06091Inherited
HLH, helix-loop-helix DNA-binding domain0.4243Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nicotinic receptor ligand binding domain-like0.01629Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.01629Inherited
Periplasmic binding protein-like I0.1244Inherited
HLH, helix-loop-helix DNA-binding domain0.4272Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49785,49899
  • 49785 - Galactose-binding domain-like
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00001075Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.01629Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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