SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Disease Ontology (DO): skeletal muscle cancer

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   disease [DOID:4] <8>
+ + + + + 5:   disease of cellular proliferation [DOID:14566] <3>(123|191) (129|118|56)
+ + + + 4:   cancer [DOID:162] <2>(115|181) (120|113|54)
+ + + 3:   organ system cancer [DOID:0050686] <14>(66|106) (72|58|31)
+ + 2:   musculoskeletal system cancer [DOID:0060100] <2>(12|17) (12|10|6)
+ 1:   muscle cancer [DOID:4045] <3>(3|4) (3|0|0)
0:   skeletal muscle cancer [DOID:4043] <2>(3|4) (3|0|0)
- 1:   rhabdomyosarcoma [DOID:3247] <4>(3|4) (3|0|0)
- 1:   alveolar soft part sarcoma [DOID:4239](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Cystine-knot cytokines0.0006449Direct
Ankyrin repeat0.0008462Direct
Protein kinase-like (PK-like)0.06749Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Paired domain0.00004137Direct
Growth factor receptor domain0.0002849Direct
Ankyrin repeat0.0005752Direct
Protein kinases, catalytic subunit0.0741Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cystine-knot cytokines0.0003965Direct
Ankyrin repeat0.000527Direct
Protein kinase-like (PK-like)0.05226Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)