SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abnormality of male external genitalia

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the genitourinary system [HP:0000119] <5>(72|74) (80|28|7)
+ + + 3:   Abnormality of the genital system [HP:0000078] <3>(33|36) (37|10|1)
+ + 2:   Abnormal reproductive system morphology [HP:0012243] <10>(26|28) (28|4|0)
+ 1:   Abnormal external genitalia [HP:0000811] <7>(14|13) (16|1|0)
+ 1:   Abnormality of the male genitalia [HP:0010461] <2>(13|13) (16|1|0)
0:   Abnormality of male external genitalia [HP:0000032] <9>(12|12) (15|1|0)
- 1:   Abnormal testis morphology [HP:0000035] <21>(8|9) (9|0|0)
- 1:   Abnormality of the scrotum [HP:0000045] <18>(0|0) (0|0|0)
- 1:   Abnormality of the penis [HP:0000036] <16>(3|5) (5|0|0)
- 1:   Abnormality of the urethra [HP:0000795] <12>(3|2) (4|0|0)
- 1:   Hypoplastic male external genitalia [HP:0000050] <3>(1|2) (2|0|0)
- 1:   Neoplasm of the male external genitalia [HP:0100848] <3>(2|1) (2|0|0)
- 1:   Male pseudohermaphroditism [HP:0000037] <1>(1|1) (1|0|0)
- 1:   Ambiguous genitalia, male [HP:0000033](0|0) (0|0|0)
- 1:   Female external genitalia in individual with 46,XY karyotype [HP:0008730](1|1) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Zn-finger domain of Sec23/240Direct
Smc hinge domain0Direct
BRK domain-like0Direct
Ribonuclease H-like0.000009885Direct
SET domain0.00004002Direct
ARID-like0.001414Inherited
Bromodomain0.004505Inherited
WD40 repeat-like0.6002Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.7888Inherited
Family A G protein-coupled receptor-like0.8484Inherited
DEATH domain0.9019Inherited
Nuclear receptor ligand-binding domain0.9562Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
BRK domain-like0Direct
Zn-finger domain of Sec23/240Direct
Smc hinge domain0Direct
PHD domain0.00007745Direct
Histone lysine methyltransferases0.00008494Direct
ARID domain0.0008549Direct
Tandem AAA-ATPase domain0.0009503Direct
Bromodomain0.002962Inherited
MIR domain0.06506Inherited
Rhodopsin-like0.5061Inherited
Nuclear receptor ligand-binding domain0.9369Inherited
RecA protein-like (ATPase-domain)0.9709Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Zn-finger domain of Sec23/240Direct
Smc hinge domain0Direct
BRK domain-like0Direct
Ribonuclease H-like0.000004358Direct
SET domain0.00001855Direct
ARID-like0.0007955Direct
Bromodomain0.002779Inherited
FYVE/PHD zinc finger0.01018Inherited
MIR domain0.06286Inherited
WD40 repeat-like0.5588Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.7544Inherited
Family A G protein-coupled receptor-like0.8166Inherited
DEATH domain0.8733Inherited
RING/U-box0.891Inherited
Nuclear receptor ligand-binding domain0.9313Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)