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Phenotypic Abnormality (PA): Abnormality of the urinary system

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Phenotypic abnormality [HP:0000118] <25>
+ 1:   Abnormality of the genitourinary system [HP:0000119] <5>(73|72) (80|28|9)
0:   Abnormality of the urinary system [HP:0000079] <4>(38|41) (45|15|7)
- 1:   Abnormality of the urinary system physiology [HP:0011277] <3>(23|26) (28|9|5)
- 1:   Abnormality of the lower urinary tract [HP:0010936] <2>(4|2) (6|2|0)
- 1:   Abnormality of the upper urinary tract [HP:0010935] <2>(21|22) (22|7|3)
- 1:   Urinary tract atresia [HP:0000809](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Smc hinge domain0Direct
PRTase-like0Direct
SAND domain-like0Direct
Tricorn protease domain 20Direct
Lamin A/C globular tail domain0Direct
(Trans)glycosidases0.004566Inherited
Transcription factor STAT-4 N-domain0.02013Inherited
STAT0.02013Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.02358Inherited
Acyl-CoA dehydrogenase NM domain-like0.02358Inherited
GroEL equatorial domain-like0.04036Inherited
Adenine nucleotide alpha hydrolases-like0.05908Inherited
PreATP-grasp domain0.06944Inherited
L-aspartase-like0.0783Inherited
4Fe-4S ferredoxins0.0783Inherited
C-type lectin-like0.09687Inherited
Alkaline phosphatase-like0.1169Inherited
Glutathione synthetase ATP-binding domain-like0.1202Inherited
Actin-like ATPase domain0.1404Inherited
Acyl-CoA N-acyltransferases (Nat)0.1782Inherited
Clc chloride channel0.1846Inherited
MHC antigen-recognition domain0.2881Inherited
Mitochondrial carrier0.3416Inherited
Cysteine-rich domain0.3664Inherited
HMG-box0.4644Inherited
FYVE/PHD zinc finger0.4702Inherited
Trypsin-like serine proteases0.5222Inherited
Complement control module/SCR domain0.53Inherited
Cytokine0.5802Inherited
ARID-like0.686Inherited
WD40 repeat-like0.8047Inherited
TNF-like0.8121Inherited
ClpP/crotonase0.874Inherited
SET domain0.8874Inherited
TPR-like0.8967Inherited
Immunoglobulin0.9299Inherited
L domain-like0.9421Inherited
Homeodomain-like0.9778Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Smc hinge domain0Direct
beta-glycanases0Direct
Lamin A/C globular tail domain0Direct
HCDH C-domain-like0Direct
alpha-Amylases, C-terminal beta-sheet domain0Direct
Phosphoribosyltransferases (PRTases)0Direct
DIX domain0Direct
Cystathionine synthase-like0Direct
Formate/glycerate dehydrogenases, substrate-binding domain0Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.00132Inherited
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.00132Inherited
BC ATP-binding domain-like0.01454Inherited
STAT0.01454Inherited
STAT DNA-binding domain0.01454Inherited
BC N-terminal domain-like0.01454Inherited
Transcription factor STAT-4 N-domain0.01454Inherited
Noncollagenous (NC1) domain of collagen IV0.08566Inherited
Clc chloride channel0.1589Inherited
Arylsulfatase0.2076Inherited
C1 set domains (antibody constant domain-like)0.2076Inherited
MHC antigen-recognition domain0.2526Inherited
Cytochrome P4500.2526Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.2895Inherited
Cytoplasmic domain of inward rectifier potassium channel0.307Inherited
Actin/HSP700.307Inherited
Integrin alpha N-terminal domain0.307Inherited
Fibroblast growth factors (FGF)0.3113Inherited
Mitochondrial carrier0.3114Inherited
HMG-box0.4272Inherited
Complement control module/SCR domain0.5004Inherited
Eukaryotic proteases0.505Inherited
Histone lysine methyltransferases0.5066Inherited
PHD domain0.5575Inherited
ARID domain0.6551Inherited
Crotonase-like0.7367Inherited
RecA protein-like (ATPase-domain)0.7766Inherited
TNF-like0.7943Inherited
Voltage-gated potassium channels0.9369Inherited
WD40-repeat0.9485Inherited
Ngr ectodomain-like0.9516Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SAND domain-like0Direct
Tricorn protease domain 20Direct
PRTase-like0Direct
Smc hinge domain0Direct
Lamin A/C globular tail domain0Direct
(Trans)glycosidases0.002758Inherited
STAT0.01371Inherited
Transcription factor STAT-4 N-domain0.01371Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.01628Inherited
Acyl-CoA dehydrogenase NM domain-like0.01628Inherited
GroEL equatorial domain-like0.02905Inherited
Adenine nucleotide alpha hydrolases-like0.04428Inherited
PreATP-grasp domain0.05287Inherited
L-aspartase-like0.0602Inherited
4Fe-4S ferredoxins0.0602Inherited
C-type lectin-like0.07592Inherited
Alkaline phosphatase-like0.09284Inherited
Glutathione synthetase ATP-binding domain-like0.09579Inherited
Actin-like ATPase domain0.114Inherited
Acyl-CoA N-acyltransferases (Nat)0.1472Inherited
CBS-domain pair0.1485Inherited
Clc chloride channel0.153Inherited
MHC antigen-recognition domain0.249Inherited
Cytochrome P4500.29Inherited
Mitochondrial carrier0.3002Inherited
Cysteine-rich domain0.3239Inherited
HMG-box0.4204Inherited
FYVE/PHD zinc finger0.4265Inherited
Trypsin-like serine proteases0.4778Inherited
Complement control module/SCR domain0.4858Inherited
Integrin domains0.5004Inherited
Cytokine0.5374Inherited
RING/U-box0.5428Inherited
ARID-like0.6467Inherited
E set domains0.7162Inherited
WD40 repeat-like0.77Inherited
TNF-like0.7776Inherited
ClpP/crotonase0.8429Inherited
SET domain0.8573Inherited
ARM repeat0.8633Inherited
TPR-like0.8671Inherited
Immunoglobulin0.9028Inherited
L domain-like0.9157Inherited
Voltage-gated potassium channels0.9266Inherited
Homeodomain-like0.955Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.01371Inherited
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.01371Inherited
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.01371Inherited
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.01628Inherited
    57903,47370
  • 57903 - FYVE/PHD zinc finger
  • 47370 - Bromodomain
  • 0.0602Inherited
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.08199Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1382Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.2375Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.249Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.249Inherited
    57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.3002Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.3031Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.3031Inherited
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.3031Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.7045Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.01371Inherited
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.01371Inherited
    57535,57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.249Inherited
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.3031Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.3031Inherited
    49265,49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.4185Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.5004Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)