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Phenotypic Abnormality (PA): Abnormality of the urinary system

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Phenotypic abnormality [HP:0000118] <25>
+ 1:   Abnormality of the genitourinary system [HP:0000119] <5>(72|74) (80|28|7)
0:   Abnormality of the urinary system [HP:0000079] <4>(36|39) (42|14|6)
- 1:   Abnormality of the urinary system physiology [HP:0011277] <3>(21|24) (25|8|4)
- 1:   Abnormality of the lower urinary tract [HP:0010936] <2>(4|2) (5|2|0)
- 1:   Abnormality of the upper urinary tract [HP:0010935] <2>(21|23) (22|9|4)
- 1:   Urinary tract atresia [HP:0000809](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Lamin A/C globular tail domain0Direct
PRTase-like0Direct
Smc hinge domain0Direct
SAND domain-like0Direct
Tricorn protease domain 20Direct
(Trans)glycosidases0.001482Inherited
PreATP-grasp domain0.02789Inherited
Glutathione synthetase ATP-binding domain-like0.0345Inherited
Transcription factor STAT-4 N-domain0.0354Inherited
GroEL equatorial domain-like0.0354Inherited
STAT0.0354Inherited
Adenine nucleotide alpha hydrolases-like0.05188Inherited
Acyl-CoA dehydrogenase NM domain-like0.06486Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.06486Inherited
L-aspartase-like0.07161Inherited
Alkaline phosphatase-like0.1103Inherited
C-type lectin-like0.1103Inherited
Actin-like ATPase domain0.1335Inherited
Acyl-CoA N-acyltransferases (Nat)0.1647Inherited
Cysteine-rich domain0.2315Inherited
FYVE/PHD zinc finger0.3145Inherited
Clc chloride channel0.3754Inherited
MHC antigen-recognition domain0.4023Inherited
Cytokine0.4721Inherited
HMG-box0.4989Inherited
Mitochondrial carrier0.6149Inherited
ARID-like0.6752Inherited
TPR-like0.7016Inherited
TNF-like0.7298Inherited
E set domains0.7345Inherited
SET domain0.766Inherited
WD40 repeat-like0.8048Inherited
L domain-like0.822Inherited
ClpP/crotonase0.8643Inherited
ARM repeat0.8763Inherited
Homeodomain-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Formate/glycerate dehydrogenases, substrate-binding domain0Direct
Lamin A/C globular tail domain0Direct
alpha-Amylases, C-terminal beta-sheet domain0Direct
DIX domain0Direct
beta-glycanases0Direct
Smc hinge domain0Direct
Phosphoribosyltransferases (PRTases)0Direct
HCDH C-domain-like0Direct
Cystathionine synthase-like0Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.01056Inherited
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.01056Inherited
BC N-terminal domain-like0.01258Inherited
BC ATP-binding domain-like0.01258Inherited
Transcription factor STAT-4 N-domain0.02699Inherited
STAT DNA-binding domain0.02699Inherited
STAT0.02699Inherited
Noncollagenous (NC1) domain of collagen IV0.07824Inherited
Cytochrome P4500.1425Inherited
Arylsulfatase0.1995Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.2438Inherited
Fibroblast growth factors (FGF)0.2888Inherited
Integrin alpha N-terminal domain0.2973Inherited
Actin/HSP700.2973Inherited
Cytoplasmic domain of inward rectifier potassium channel0.2973Inherited
Clc chloride channel0.3462Inherited
MHC antigen-recognition domain0.3637Inherited
C1 set domains (antibody constant domain-like)0.3678Inherited
PHD domain0.3922Inherited
HMG-box0.4605Inherited
Histone lysine methyltransferases0.4936Inherited
Mitochondrial carrier0.5945Inherited
ARID domain0.6439Inherited
TNF-like0.7127Inherited
Crotonase-like0.7264Inherited
RecA protein-like (ATPase-domain)0.7649Inherited
Ngr ectodomain-like0.8886Inherited
Voltage-gated potassium channels0.953Inherited
WD40-repeat0.9548Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Smc hinge domain0Direct
PRTase-like0Direct
Lamin A/C globular tail domain0Direct
SAND domain-like0Direct
Tricorn protease domain 20Direct
(Trans)glycosidases0.0008368Direct
PreATP-grasp domain0.01977Inherited
Glutathione synthetase ATP-binding domain-like0.02491Inherited
GroEL equatorial domain-like0.02561Inherited
STAT0.02561Inherited
Transcription factor STAT-4 N-domain0.02561Inherited
Adenine nucleotide alpha hydrolases-like0.03874Inherited
Acyl-CoA dehydrogenase NM domain-like0.04941Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.04941Inherited
L-aspartase-like0.05503Inherited
Alkaline phosphatase-like0.08792Inherited
C-type lectin-like0.08792Inherited
Actin-like ATPase domain0.1085Inherited
Acyl-CoA N-acyltransferases (Nat)0.1361Inherited
Cytochrome P4500.1678Inherited
Cysteine-rich domain0.1972Inherited
CBS-domain pair0.2755Inherited
FYVE/PHD zinc finger0.2759Inherited
Clc chloride channel0.3344Inherited
MHC antigen-recognition domain0.3608Inherited
Cytokine0.4296Inherited
HMG-box0.4557Inherited
PDZ domain-like0.4663Inherited
Integrin domains0.4889Inherited
Mitochondrial carrier0.5739Inherited
RING/U-box0.6191Inherited
ARID-like0.6361Inherited
TPR-like0.6633Inherited
TNF-like0.6924Inherited
E set domains0.6974Inherited
SET domain0.7306Inherited
WD40 repeat-like0.7713Inherited
L domain-like0.7894Inherited
ClpP/crotonase0.8334Inherited
ARM repeat0.8463Inherited
Voltage-gated potassium channels0.9772Inherited
Homeodomain-like0.9826Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.02561Inherited
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.02561Inherited
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.02561Inherited
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.04941Inherited
    57903,47370
  • 57903 - FYVE/PHD zinc finger
  • 47370 - Bromodomain
  • 0.05503Inherited
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.07352Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1324Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.2171Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.2411Inherited
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.2948Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.2948Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.2948Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.3608Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.6361Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.02561Inherited
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.02561Inherited
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.2948Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.2948Inherited
    49265,49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.391Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.4889Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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