SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abnormality of the pancreas

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the digestive system [HP:0025031] <6>(67|77) (77|46|25)
+ 1:   Abnormality of the abdominal organs [HP:0002012] <6>(27|27) (30|13|4)
0:   Abnormality of the pancreas [HP:0001732] <3>(6|5) (7|3|0)
- 1:   Abnormal pancreas morphology [HP:0012090] <15>(3|1) (3|0|0)
- 1:   Neoplasm of the pancreas [HP:0002894] <4>(2|2) (3|1|0)
- 1:   Abnormality of pancreas physiology [HP:0012091] <3>(1|2) (1|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.002167Inherited
Ribosomal protein S5 domain 2-like0.04283Inherited
MHC antigen-recognition domain0.05203Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.1156Inherited
Homeodomain-like0.2146Inherited
"Winged helix" DNA-binding domain0.3933Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, N-terminal domain0.00001311Direct
DNA gyrase/MutL, second domain0.00001311Direct
MHC antigen-recognition domain0.04164Inherited
C1 set domains (antibody constant domain-like)0.1093Inherited
Homeodomain0.1918Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.001223Inherited
BRCT domain0.01621Inherited
Ribosomal protein S5 domain 2-like0.03102Inherited
MHC antigen-recognition domain0.03851Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.09169Inherited
Homeodomain-like0.1806Inherited
"Winged helix" DNA-binding domain0.35Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.000009544Direct
    50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0.0001386Direct
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.03851Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)