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Phenotypic Abnormality (PA): Abnormality of the abdominal organs

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Phenotypic abnormality [HP:0000118] <25>
+ 1:   Abnormality of the digestive system [HP:0025031] <6>(67|77) (77|47|25)
0:   Abnormality of the abdominal organs [HP:0002012] <6>(27|27) (30|14|4)
- 1:   Abnormality of the peritoneum [HP:0002585] <6>(0|0) (0|0|0)
- 1:   Abnormality of the liver [HP:0001392] <4>(17|12) (17|7|0)
- 1:   Abnormality of the pancreas [HP:0001732] <3>(6|5) (7|3|0)
- 1:   Abnormality of abdominal situs [HP:0011620] <2>(0|0) (0|0|0)
- 1:   Abnormality of mesentery morphology [HP:0100016] <2>(0|0) (0|0|0)
- 1:   Abnormality of the spleen [HP:0001743] <2>(7|14) (9|4|3)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Notch domain0Direct
Tricorn protease domain 20Direct
Fibrinogen coiled-coil and central regions0Direct
UDP-Glycosyltransferase/glycogen phosphorylase0.0007022Direct
Globin-like0.003281Inherited
TNF receptor-like0.009419Inherited
MHC antigen-recognition domain0.01093Inherited
DEATH domain0.02082Inherited
Glycosyl hydrolase domain0.05263Inherited
(Trans)glycosidases0.06155Inherited
TPR-like0.1235Inherited
GroEL equatorial domain-like0.1374Inherited
Ribosomal protein S5 domain 2-like0.1457Inherited
6-phosphogluconate dehydrogenase C-terminal domain-like0.181Inherited
Fibrinogen C-terminal domain-like0.1923Inherited
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.1923Inherited
Adenine nucleotide alpha hydrolases-like0.1923Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.2488Inherited
Acyl-CoA dehydrogenase NM domain-like0.2488Inherited
ABC transporter transmembrane region0.3473Inherited
WD40 repeat-like0.4449Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.4862Inherited
SH3-domain0.6211Inherited
Nucleotidylyl transferase0.6292Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.662Inherited
"Winged helix" DNA-binding domain0.8848Inherited
Homeodomain-like0.9801Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
Glycosyl transferases group 10Direct
Notch domain0Direct
Phoshoinositide 3-kinase (PI3K) helical domain0Direct
Putative glucosidase YicI, domain 30Direct
Fibrinogen coiled-coil and central regions0Direct
Globins0.002211Inherited
C1 set domains (antibody constant domain-like)0.002975Inherited
DNA gyrase/MutL, second domain0.006847Inherited
DNA gyrase/MutL, N-terminal domain0.006847Inherited
Pyrin domain, PYD0.006847Inherited
MHC antigen-recognition domain0.008093Inherited
TNF receptor-like0.03304Inherited
Tetratricopeptide repeat (TPR)0.04345Inherited
Ras-binding domain, RBD0.06799Inherited
DEATH domain, DD0.09247Inherited
beta-glycanases0.1167Inherited
PX domain0.1687Inherited
Fibrinogen C-terminal domain-like0.172Inherited
28-residue LRR0.2015Inherited
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.2015Inherited
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.2015Inherited
ABC transporter transmembrane region0.2015Inherited
SH3-domain0.5896Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.6092Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.7568Inherited
Homeodomain0.9465Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
Notch domain0Direct
Tricorn protease domain 20Direct
UDP-Glycosyltransferase/glycogen phosphorylase0.0003625Direct
Globin-like0.001917Inherited
TNF receptor-like0.006039Inherited
MHC antigen-recognition domain0.007048Inherited
DEATH domain0.01423Inherited
Glycosyl hydrolase domain0.039Inherited
(Trans)glycosidases0.04631Inherited
TPR-like0.09877Inherited
GroEL equatorial domain-like0.1113Inherited
Ribosomal protein S5 domain 2-like0.1188Inherited
6-phosphogluconate dehydrogenase C-terminal domain-like0.1498Inherited
Fibrinogen C-terminal domain-like0.1603Inherited
Adenine nucleotide alpha hydrolases-like0.1603Inherited
BRCT domain0.1603Inherited
PX domain0.1603Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.1603Inherited
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.1603Inherited
Acyl-CoA dehydrogenase NM domain-like0.2121Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.2121Inherited
ABC transporter transmembrane region0.3056Inherited
WD40 repeat-like0.401Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.4424Inherited
SH3-domain0.5795Inherited
Nucleotidylyl transferase0.5879Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.6214Inherited
"Winged helix" DNA-binding domain0.8548Inherited
Homeodomain-like0.9577Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 0Direct
    103473,100895
  • 103473 - MFS general substrate transporter
  • 100895 - Kazal-type serine protease inhibitors
  • 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.002943Inherited
    55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.006161Inherited
    47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.006161Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.007048Inherited
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.01838Inherited
    50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0.01838Inherited
    51445,51011
  • 51445 - (Trans)glycosidases
  • 51011 - Glycosyl hydrolase domain
  • 0.039Inherited
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.2121Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.2732Inherited
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.3056Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.5265Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,90193
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    57586,57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.01838Inherited
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.07605Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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