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Phenotypic Abnormality (PA): Abnormality of the stomach

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the digestive system [HP:0025031] <6>(67|77) (77|46|25)
+ + 2:   Abnormality of the gastrointestinal tract [HP:0011024] <3>(24|27) (28|13|4)
+ + 2:   Abnormality of digestive system morphology [HP:0025033] <2>(13|19) (17|8|4)
+ 1:   Morphological abnormality of the gastrointestinal tract [HP:0012718] <8>(13|19) (17|8|4)
0:   Abnormality of the stomach [HP:0002577] <13>(4|4) (5|2|0)
- 1:   Neoplasm of the stomach [HP:0006753] <5>(2|1) (2|1|0)
- 1:   Abnormality of the gastric mucosa [HP:0004295] <2>(1|0) (1|0|0)
- 1:   Abnormality of the pylorus [HP:0004400] <2>(1|0) (1|0|0)
- 1:   Absence of intrinsic factor [HP:0005219](0|0) (0|0|0)
- 1:   Gastric diverticulum [HP:0100808](0|0) (0|0|0)
- 1:   Gastric duplication [HP:0011139](0|0) (0|0|0)
- 1:   Gastric hypertrophy [HP:0005207](0|0) (0|0|0)
- 1:   Gastric varix [HP:0030169](0|0) (0|0|0)
- 1:   Gastroesophageal reflux [HP:0002020](0|1) (1|0|0)
- 1:   Gastroparesis [HP:0002578](0|0) (0|0|0)
- 1:   Hiatus hernia [HP:0002036](0|0) (0|0|0)
- 1:   Malposition of the stomach [HP:0100802](0|0) (0|0|0)
- 1:   Microgastria [HP:0100841](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.002496Inherited
Protein kinase-like (PK-like)0.1027Inherited
SH3-domain0.3579Inherited
DEATH domain0.7966Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Laminin G-like module0.0008143Direct
Extended AAA-ATPase domain0.0009234Direct
DNA repair protein MutS, domain III0.001485Inherited
SNARE fusion complex0.005187Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.001427Inherited
SNARE fusion complex0.005093Inherited
Protein kinase-like (PK-like)0.08087Inherited
SH3-domain0.3158Inherited
DEATH domain0.7614Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49899,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.0002211Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001427Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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