SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Pancreatic adenocarcinoma

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the digestive system [HP:0025031] <6>(59|66) (66|38|20)
+ + + 3:   Abnormality of the abdominal organs [HP:0002012] <6>(27|24) (31|12|2)
+ + + 3:   Neoplasm [HP:0002664] <2>(20|22) (24|7|4)
+ + 2:   Abnormality of the pancreas [HP:0001732] <3>(7|6) (8|3|0)
+ + 2:   Neoplasm by anatomical site [HP:0011793] <24>(19|19) (22|6|3)
+ 1:   Neoplasm of the pancreas [HP:0002894] <4>(3|3) (4|1|0)
0:   Pancreatic adenocarcinoma [HP:0006725](2|2) (2|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.0000001673Direct
Ribosomal protein S5 domain 2-like0.000003557Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, second domain0.0000000005848Direct
DNA gyrase/MutL, N-terminal domain0.0000000005848Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00000006762Direct
Ribosomal protein S5 domain 2-like0.000001518Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.0000000002826Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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