SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Lipodystrophy

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of connective tissue [HP:0003549] <12>(19|27) (19|20|20)
+ 1:   Abnormal adipose tissue morphology [HP:0009124] <10>(5|6) (5|1|2)
0:   Lipodystrophy [HP:0009125] <3>(5|5) (5|1|2)
- 1:   Congenital generalized lipodystrophy [HP:0009059](0|0) (0|0|0)
- 1:   Generalized lipodystrophy [HP:0009064](0|0) (0|0|0)
- 1:   Lipoatrophy [HP:0100578](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Calponin-homology domain, CH-domain0.0002091Direct
Ribonuclease H-like0.0002335Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.000282Direct
Spectrin repeat0.0006382Direct
Myosin rod fragments0.001235Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
LIM domain0.0001141Direct
Calponin-homology domain, CH-domain0.0001637Direct
Spectrin repeat0.0004796Direct
Myosin rod fragments0.0008926Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Calponin-homology domain, CH-domain0.0001007Direct
Ribonuclease H-like0.0001133Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0001383Direct
Spectrin repeat0.0003281Direct
Myosin rod fragments0.0006638Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0001674Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000006417Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0001133Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)