SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Abnormality of the lower urinary tract

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the genitourinary system [HP:0000119] <5>(73|72) (80|28|9)
+ 1:   Abnormality of the urinary system [HP:0000079] <4>(38|41) (45|15|7)
0:   Abnormality of the lower urinary tract [HP:0010936] <2>(4|2) (6|2|0)
- 1:   Abnormality of the urethra [HP:0000795] <12>(3|2) (4|0|0)
- 1:   Abnormality of the bladder [HP:0000014] <2>(1|0) (2|2|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Smc hinge domain0Direct
SET domain0.004161Inherited
Immunoglobulin0.4523Inherited
WD40 repeat-like0.5019Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Smc hinge domain0Direct
Histone lysine methyltransferases0.0008056Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Smc hinge domain0Direct
SET domain0.002489Inherited
RING/U-box0.02058Inherited
ARM repeat0.04364Inherited
Immunoglobulin0.4086Inherited
WD40 repeat-like0.4577Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.001818Inherited
    57903,47370
  • 57903 - FYVE/PHD zinc finger
  • 47370 - Bromodomain
  • 0.00302Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)