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Phenotypic Abnormality (PA): Abnormality of the urinary system physiology

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the genitourinary system [HP:0000119] <5>(72|74) (80|28|7)
+ 1:   Abnormality of the urinary system [HP:0000079] <4>(36|39) (42|14|6)
0:   Abnormality of the urinary system physiology [HP:0011277] <3>(21|24) (25|8|4)
- 1:   Abnormality of urine homeostasis [HP:0003110] <57>(14|16) (18|3|0)
- 1:   Abnormal renal physiology [HP:0012211] <15>(9|11) (10|5|2)
- 1:   Recurrent urinary tract infections [HP:0000010] <2>(0|1) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
PRTase-like0Direct
Tricorn protease domain 20Direct
Glutathione synthetase ATP-binding domain-like0.001578Inherited
PreATP-grasp domain0.001657Inherited
Acyl-CoA dehydrogenase NM domain-like0.003741Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.003741Inherited
Transcription factor STAT-4 N-domain0.00459Inherited
STAT0.00459Inherited
L-aspartase-like0.01522Inherited
ClpP/crotonase0.02966Inherited
Clc chloride channel0.1209Inherited
(Trans)glycosidases0.1334Inherited
Adenine nucleotide alpha hydrolases-like0.1708Inherited
Mitochondrial carrier0.1808Inherited
Alkaline phosphatase-like0.2121Inherited
GroEL equatorial domain-like0.2433Inherited
TNF-like0.2879Inherited
C-type lectin-like0.4015Inherited
E set domains0.5249Inherited
L domain-like0.5946Inherited
Cysteine-rich domain0.7721Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
beta-glycanases0Direct
Phosphoribosyltransferases (PRTases)0Direct
HCDH C-domain-like0Direct
Cystathionine synthase-like0Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.0003096Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.0003096Direct
Integrin alpha N-terminal domain0.0008314Direct
BC N-terminal domain-like0.0008314Direct
BC ATP-binding domain-like0.0008314Direct
Transcription factor STAT-4 N-domain0.003098Inherited
STAT DNA-binding domain0.003098Inherited
STAT0.003098Inherited
Noncollagenous (NC1) domain of collagen IV0.01119Inherited
Cytoplasmic domain of inward rectifier potassium channel0.01896Inherited
Crotonase-like0.06425Inherited
Arylsulfatase0.06687Inherited
Clc chloride channel0.1029Inherited
RecA protein-like (ATPase-domain)0.1453Inherited
Mitochondrial carrier0.1604Inherited
Cytochrome P4500.1852Inherited
TNF-like0.2633Inherited
Ngr ectodomain-like0.5738Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.6095Inherited
Voltage-gated potassium channels0.8751Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PRTase-like0Direct
Tricorn protease domain 20Direct
Glutathione synthetase ATP-binding domain-like0.0008948Direct
PreATP-grasp domain0.0009425Direct
Acyl-CoA dehydrogenase NM domain-like0.002279Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.002279Inherited
STAT0.002832Inherited
Transcription factor STAT-4 N-domain0.002832Inherited
Integrin domains0.002881Inherited
L-aspartase-like0.01024Inherited
ClpP/crotonase0.02116Inherited
CBS-domain pair0.04688Inherited
Clc chloride channel0.09709Inherited
(Trans)glycosidases0.1083Inherited
Adenine nucleotide alpha hydrolases-like0.1416Inherited
Mitochondrial carrier0.1503Inherited
Cytochrome P4500.1794Inherited
Alkaline phosphatase-like0.1794Inherited
GroEL equatorial domain-like0.2081Inherited
TNF-like0.2503Inherited
C-type lectin-like0.3599Inherited
E set domains0.4819Inherited
L domain-like0.5529Inherited
Cysteine-rich domain0.7371Inherited
Voltage-gated potassium channels0.9712Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.0007297Direct
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.0007297Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.002279Inherited
    48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.002832Inherited
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.002832Inherited
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.002832Inherited
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.01751Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.0427Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.0007297Direct
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.0007297Direct
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.002832Inherited
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.002832Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)