SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abnormality of the mitochondrion

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of metabolism/homeostasis [HP:0001939] <15>(73|82) (83|38|18)
+ + 2:   Abnormal cellular phenotype [HP:0025354] <3>(10|11) (15|3|0)
+ 1:   Abnormal cellular physiology [HP:0011017] <16>(10|10) (15|3|0)
0:   Abnormality of the mitochondrion [HP:0012103] <2>(5|3) (8|1|0)
- 1:   Abnormality of mitochondrial metabolism [HP:0003287] <14>(5|2) (7|1|0)
- 1:   Abnormal mitochondrial morphology [HP:0008322] <2>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Acyl-CoA dehydrogenase NM domain-like0.00001459Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.00001459Direct
4Fe-4S ferredoxins0.00003224Direct
Adenine nucleotide alpha hydrolases-like0.0007211Direct
CoA-dependent acyltransferases0.001254Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.000001294Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.000001294Direct
Mitochondrial carrier0.000747Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Acyl-CoA dehydrogenase NM domain-like0.000006526Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.000006526Direct
4Fe-4S ferredoxins0.00001483Direct
Adenine nucleotide alpha hydrolases-like0.0003861Direct
CoA-dependent acyltransferases0.0006987Direct
Mitochondrial carrier0.0008049Direct
Thioredoxin-like0.01803Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.05386Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.000006526Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)