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Phenotypic Abnormality (PA): Functional abnormality of the gastrointestinal tract

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the digestive system [HP:0025031] <6>(59|66) (66|38|20)
+ 1:   Abnormality of digestive system physiology [HP:0025032] <5>(22|23) (26|11|0)
+ 1:   Abnormality of the gastrointestinal tract [HP:0011024] <3>(18|22) (23|10|4)
0:   Functional abnormality of the gastrointestinal tract [HP:0012719] <11>(7|8) (10|2|0)
- 1:   Gastrointestinal hemorrhage [HP:0002239] <5>(3|5) (3|1|0)
- 1:   Abnormality of esophagus physiology [HP:0025270] <3>(0|1) (2|0|0)
- 1:   Gastrointestinal inflammation [HP:0004386] <3>(2|0) (3|0|0)
- 1:   Gastrointestinal obstruction [HP:0004796] <3>(0|0) (0|0|0)
- 1:   Recurrent infection of the gastrointestinal tract [HP:0004798] <3>(0|0) (0|0|0)
- 1:   Abnormal gastrointestinal motility [HP:0030895] <2>(2|2) (2|1|0)
- 1:   Unusual gastrointestinal infection [HP:0032166] <2>(0|0) (0|0|0)
- 1:   Peptic ulcer [HP:0004398] <1>(0|0) (0|0|0)
- 1:   Achlorhydria [HP:0032448](0|0) (0|0|0)
- 1:   Gastrointestinal infarctions [HP:0005244](0|0) (0|0|0)
- 1:   Odynophagia [HP:0032043](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
RNI-like0.02798Inherited
Ran binding protein zinc finger-like0.2175Inherited
Integrin domains0.4663Inherited
DEATH domain0.538Inherited
Actin-like ATPase domain0.5953Inherited
L domain-like0.6072Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
DNA gyrase/MutL, second domain0.001847Inherited
DNA gyrase/MutL, N-terminal domain0.001847Inherited
SNARE fusion complex0.02256Inherited
Ran binding protein zinc finger-like0.187Inherited
Actin/HSP700.201Inherited
Ngr ectodomain-like0.2951Inherited
Integrin domains0.4294Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
RNI-like0.01984Inherited
SNARE fusion complex0.02124Inherited
Snake toxin-like0.04329Inherited
beta-sandwich domain of Sec23/240.0638Inherited
Ran binding protein zinc finger-like0.1841Inherited
Integrin domains0.4241Inherited
DEATH domain0.4953Inherited
Actin-like ATPase domain0.5537Inherited
L domain-like0.566Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.001651Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.3816Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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