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Phenotypic Abnormality (PA): Abnormality of the glial cells

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the nervous system [HP:0000707] <4>(140|161) (154|97|43)
+ + 2:   Abnormality of nervous system morphology [HP:0012639] <5>(70|93) (79|45|15)
+ 1:   Morphological abnormality of the central nervous system [HP:0002011] <17>(62|82) (71|38|15)
0:   Abnormality of the glial cells [HP:0100705] <6>(5|5) (5|3|0)
- 1:   Glioma [HP:0009733] <6>(3|4) (3|2|0)
- 1:   Gliosis [HP:0002171] <5>(1|1) (1|0|0)
- 1:   Abnormality of the astrocytes [HP:0100707] <1>(1|2) (1|1|0)
- 1:   Abnormality of the oligodendroglia [HP:0100706] <1>(0|0) (0|0|0)
- 1:   Abnormality of the microglia [HP:0100708](0|0) (0|0|0)
- 1:   Astrocytosis [HP:0002446](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.00002145Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.0001191Direct
ARM repeat0.0002408Direct
NagB/RpiA/CoA transferase-like0.0009776Direct
Ribosomal protein S5 domain 2-like0.008506Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
IF2B-like0Direct
DNA gyrase/MutL, second domain0.000000412Direct
DNA gyrase/MutL, N-terminal domain0.000000412Direct
DNA repair protein MutS, domain III0.0000121Direct
ABC transporter ATPase domain-like0.03592Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.00000972Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00005778Direct
ARM repeat0.0001211Direct
NagB/RpiA/CoA transferase-like0.0005347Direct
Ribosomal protein S5 domain 2-like0.005535Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.0000003101Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000972Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0003292Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)