SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal intestine morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   digestive/alimentary phenotype [MP:0005381] <2>(38|46) (40|19|9)
+ 1:   abnormal digestive system morphology [MP:0000462] <21>(30|38) (31|13|3)
0:   abnormal intestine morphology [MP:0000477] <17>(10|14) (11|9|2)
- 1:   abnormal small intestine morphology [MP:0000496] <10>(2|2) (3|0|0)
- 1:   abnormal large intestine morphology [MP:0000489] <7>(2|4) (2|3|0)
- 1:   intestine polyps [MP:0008011] <4>(0|0) (0|0|0)
- 1:   abnormal intestinal epithelium morphology [MP:0000488] <3>(7|7) (7|3|1)
- 1:   abnormal intestine development [MP:0010158] <3>(1|1) (1|1|0)
- 1:   abnormal intestinal iron level [MP:0008740] <2>(0|0) (0|0|0)
- 1:   abnormal intestine placement [MP:0014023] <2>(0|0) (0|0|0)
- 1:   decreased intestine length [MP:0013916] <2>(1|1) (1|0|0)
- 1:   increased intestine length [MP:0013954] <2>(0|0) (0|0|0)
- 1:   abnormal intestinal smooth muscle morphology [MP:0008802](0|0) (0|0|0)
- 1:   herniated intestine [MP:0005155](1|0) (1|0|0)
- 1:   intestinal fibrosis [MP:0011748](0|0) (0|0|0)
- 1:   intestinal microaneurysm [MP:0003274](0|0) (0|0|0)
- 1:   intestinal mucus accumulation [MP:0014231](0|0) (0|0|0)
- 1:   intestinal stenosis [MP:0011974](0|0) (0|0|0)
- 1:   intestinal/bowel diverticulum [MP:0003262](0|0) (0|0|0)
- 1:   intussusception [MP:0003294](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
N-acetylmuramoyl-L-alanine amidase-like0Direct
p53 tetramerization domain0Direct
Trefoil0.00193Inherited
4-helical cytokines0.008823Inherited
Rhodanese/Cell cycle control phosphatase0.05672Inherited
Kringle-like0.193Inherited
DBL homology domain (DH-domain)0.2374Inherited
Calponin-homology domain, CH-domain0.3478Inherited
Growth factor receptor domain0.5878Inherited
RING/U-box0.5924Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
p53 DNA-binding domain-like0Direct
p53 tetramerization domain0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
Trefoil0.001408Inherited
Phoshoinositide 3-kinase (PI3K), catalytic domain0.004022Inherited
Interferons/interleukin-10 (IL-10)0.006944Inherited
Cell cycle control phosphatase, catalytic domain0.01357Inherited
Short-chain cytokines0.0628Inherited
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain0.1021Inherited
Kringle modules0.1109Inherited
Rel/Dorsal transcription factors, DNA-binding domain0.1615Inherited
DBL homology domain (DH-domain)0.2297Inherited
Calponin-homology domain, CH-domain0.3094Inherited
EGF-type module0.4842Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
p53 tetramerization domain0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
Trefoil0.001095Inherited
4-helical cytokines0.00546Inherited
Rhodanese/Cell cycle control phosphatase0.04058Inherited
Kringle-like0.1571Inherited
DBL homology domain (DH-domain)0.1981Inherited
Calponin-homology domain, CH-domain0.3025Inherited
Growth factor receptor domain0.5417Inherited
RING/U-box0.5465Inherited
EGF/Laminin0.6369Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49417,47719
  • 49417 - p53-like transcription factors
  • 47719 - p53 tetramerization domain
  • 0Direct
    47576,48065
  • 47576 - Calponin-homology domain, CH-domain
  • 48065 - DBL homology domain (DH-domain)
  • 0Direct
    55550,50729
  • 55550 - SH2 domain
  • 50729 - PH domain-like
  • 0.0004562Direct
    52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.001054Inherited
    57440,50494
  • 57440 - Kringle-like
  • 50494 - Trypsin-like serine proteases
  • 0.00358Inherited
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.03364Inherited
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.1571Inherited
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.1782Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.5287Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47576,48065,50729
  • 47576 - Calponin-homology domain, CH-domain
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0001196Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)