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Mammalian Phenotype (MP): abnormal spinal cord morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ 1:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
0:   abnormal spinal cord morphology [MP:0000955] <13>(7|9) (8|4|3)
- 1:   abnormal spinal cord grey matter morphology [MP:0008503] <4>(1|1) (1|0|1)
- 1:   abnormal spinal cord white matter morphology [MP:0008027] <3>(3|5) (5|1|0)
- 1:   abnormal spinal cord commissure morphology [MP:0009694] <2>(3|3) (3|1|1)
- 1:   abnormal spinal cord motor column morphology [MP:0009685] <2>(0|0) (0|0|0)
- 1:   abnormal spinal cord ependymal layer morphology [MP:0010151] <1>(0|0) (0|0|0)
- 1:   abnormal spinal cord central canal morphology [MP:0009688](0|0) (0|0|0)
- 1:   decreased spinal cord size [MP:0000956](0|0) (0|0|0)
- 1:   diastematomyelia [MP:0012710](0|0) (0|0|0)
- 1:   diplomyelia [MP:0012711](0|0) (0|0|0)
- 1:   hydromyelia [MP:0003086](0|0) (0|0|0)
- 1:   increased spinal cord size [MP:0002809](0|0) (0|0|0)
- 1:   spinal cord degeneration [MP:0012712](0|0) (0|0|0)
- 1:   syringomyelia [MP:0012545](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0002944Direct
Cap-Gly domain0.004142Inherited
p53-like transcription factors0.008811Inherited
L domain-like0.04032Inherited
Galactose-binding domain-like0.1274Inherited
EGF/Laminin0.229Inherited
Concanavalin A-like lectins/glucanases0.5008Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00002933Direct
FYVE, a phosphatidylinositol-3-phosphate binding domain0.0001884Direct
L domain0.0005899Direct
Cap-Gly domain0.00298Inherited
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain0.00574Inherited
Rel/Dorsal transcription factors, DNA-binding domain0.009706Inherited
EGF-type module0.1339Inherited
Ngr ectodomain-like0.2818Inherited
Laminin G-like module0.3934Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.0001515Direct
Cap-Gly domain0.002449Inherited
p53-like transcription factors0.005448Inherited
L domain-like0.02803Inherited
Galactose-binding domain-like0.09888Inherited
SH2 domain0.1879Inherited
EGF/Laminin0.1902Inherited
Concanavalin A-like lectins/glucanases0.4532Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0004661Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0004661Direct
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.008108Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1583Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0004661Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.002449Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1035Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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