SUPERFAMILY 1.75 HMM library and genome assignments server

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Mammalian Phenotype (MP): abnormal bronchial provocation

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   mammalian phenotype [MP:0000001] <29>
+ + + + 4:   respiratory system phenotype [MP:0005388] <2>(33|46) (36|29|15)
+ + + 3:   abnormal respiratory system physiology [MP:0002133] <23>(15|21) (16|13|7)
+ + 2:   abnormal respiration [MP:0001943] <6>(12|15) (13|9|6)
+ 1:   abnormal respiratory function [MP:0002327] <4>(10|11) (10|7|5)
0:   abnormal bronchial provocation [MP:0002330] <1>(5|4) (5|2|0)
- 1:   abnormal airway responsiveness [MP:0002334] <2>(5|4) (5|2|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DEATH domain0.00007314Direct
Family A G protein-coupled receptor-like0.0001217Direct
TNF receptor-like0.0001508Direct
Toll/Interleukin receptor TIR domain0.0002479Direct
4-helical cytokines0.0005375Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DEATH domain, DD0.00002012Direct
Rhodopsin-like0.000032Direct
TNF receptor-like0.00005316Direct
Toll/Interleukin receptor TIR domain0.0001732Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DEATH domain0.00003496Direct
Family A G protein-coupled receptor-like0.00005983Direct
TNF receptor-like0.00007518Direct
Toll/Interleukin receptor TIR domain0.0001263Direct
4-helical cytokines0.0002848Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.000009972Direct
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.002986Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)