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Mammalian Phenotype (MP): abnormal posterior eye segment morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   vision/eye phenotype [MP:0005391] <2>(43|53) (50|27|17)
+ 1:   abnormal eye morphology [MP:0002092] <23>(39|49) (46|25|15)
0:   abnormal posterior eye segment morphology [MP:0005195] <4>(21|24) (23|14|8)
- 1:   abnormal optic nerve morphology [MP:0001330] <12>(4|3) (4|1|0)
- 1:   abnormal vitreous body morphology [MP:0002699] <6>(2|2) (2|1|0)
- 1:   abnormal ocular fundus morphology [MP:0002864] <2>(19|23) (21|14|8)
- 1:   retrolental blood [MP:0014087](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Notch domain0Direct
GroEL equatorial domain-like0.003151Inherited
GAF domain-like0.006895Inherited
Cyclin-like0.009114Inherited
Sema domain0.009754Inherited
Nuclear receptor ligand-binding domain0.01071Inherited
E2F-DP heterodimerization region0.01235Inherited
Clc chloride channel0.01934Inherited
CBS-domain pair0.02121Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.02435Inherited
Plexin repeat0.02932Inherited
Tetraspanin0.03513Inherited
HLH, helix-loop-helix DNA-binding domain0.1451Inherited
HD-domain/PDEase-like0.2045Inherited
Toll/Interleukin receptor TIR domain0.2614Inherited
EGF/Laminin0.2843Inherited
PGBD-like0.2948Inherited
Metalloproteases ("zincins"), catalytic domain0.3869Inherited
TNF-like0.5262Inherited
HMG-box0.7291Inherited
Homeodomain-like0.812Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Retinoblastoma tumor suppressor domains0Direct
Notch domain0Direct
E2F dimerization segment0.004996Inherited
GAF domain0.004996Inherited
Sema domain0.007095Inherited
Nuclear receptor ligand-binding domain0.008016Inherited
Nuclear receptor0.008016Inherited
CBS-domain pair0.01214Inherited
Clc chloride channel0.01481Inherited
Cell cycle transcription factor e2f-dp0.02195Inherited
Plexin repeat0.02306Inherited
HLH, helix-loop-helix DNA-binding domain0.1295Inherited
cAMP-binding domain0.151Inherited
Cyclin0.1625Inherited
PDEase0.177Inherited
POU-specific domain0.177Inherited
Calmodulin-like0.182Inherited
Matrix metalloproteases, catalytic domain0.2659Inherited
MMP N-terminal domain0.2659Inherited
Laminin-type module0.3275Inherited
Extracellular domain of cell surface receptors0.3697Inherited
YWTD domain0.4281Inherited
TNF-like0.501Inherited
HMG-box0.7081Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Notch domain0Direct
GroEL equatorial domain-like0.001834Inherited
GAF domain-like0.00422Inherited
Cyclin-like0.005657Inherited
Sema domain0.006089Inherited
Nuclear receptor ligand-binding domain0.00673Inherited
E2F-DP heterodimerization region0.007843Inherited
Clc chloride channel0.01266Inherited
CBS-domain pair0.01399Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.01626Inherited
Plexin repeat0.01992Inherited
Tetraspanin0.02419Inherited
HLH, helix-loop-helix DNA-binding domain0.1144Inherited
HD-domain/PDEase-like0.1674Inherited
Toll/Interleukin receptor TIR domain0.2203Inherited
EGF/Laminin0.242Inherited
PGBD-like0.2519Inherited
Metalloproteases ("zincins"), catalytic domain0.3405Inherited
YWTD domain0.4104Inherited
TNF-like0.479Inherited
Growth factor receptor domain0.6093Inherited
HMG-box0.69Inherited
Homeodomain-like0.7779Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.003677Inherited
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0.00422Inherited
    55781,109604
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.00422Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.006089Inherited
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0.007843Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.02625Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.03031Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.08329Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1003Inherited
    101288,50156
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 0.1674Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.1674Inherited
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.2519Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,90193,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0Direct
    55781,55781,109604
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.00422Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.01617Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.01992Inherited
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.06717Inherited
    101288,50156,50044
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 0.1674Inherited
    49899,57196,57196
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1674Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.2519Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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