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Worm Phenotype (WP): life span variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ 1:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
0:   life span variant [WBPhenotype:0000039] <7>(27|28) (28|12|3)
- 1:   dauer lifespan variant [WBPhenotype:0001540] <2>(3|3) (3|0|0)
- 1:   diet induced life span variant [WBPhenotype:0001837](0|0) (0|0|0)
- 1:   drug induced life span variant [WBPhenotype:0001871](0|0) (0|0|0)
- 1:   extended life span [WBPhenotype:0000061](4|9) (4|2|0)
- 1:   hormetic temperature induced life span extension defective [WBPhenotype:0001775](0|0) (0|0|0)
- 1:   shortened life span [WBPhenotype:0001171](6|9) (6|4|1)
- 1:   temperature influenced life span variant [WBPhenotype:0001789](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Lipovitellin-phosvitin complex, superhelical domain0Direct
Aminoacid dehydrogenase-like, N-terminal domain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
SET domain0Direct
Carbonic anhydrase0Direct
Heme-dependent catalase-like0Direct
14-3-3 protein0Direct
Ribosomal protein L10Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Histone-fold0.0000000002129Direct
Clavaminate synthase-like0.0000002115Direct
FAD-linked reductases, C-terminal domain0.00000201Direct
"Winged helix" DNA-binding domain0.000002403Direct
Sm-like ribonucleoproteins0.000005063Direct
Cullin homology domain0.00001751Direct
FAD/NAD(P)-binding domain0.00005586Direct
Protein kinase-like (PK-like)0.0002044Direct
4Fe-4S ferredoxins0.0002767Direct
Lamin A/C globular tail domain0.0002782Direct
GroEL-intermediate domain like0.0004044Direct
GroEL equatorial domain-like0.0004044Direct
Cullin repeat-like0.0004044Direct
Ferritin-like0.0005Direct
Nucleotide-binding domain0.001336Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.004239Inherited
Seven-hairpin glycosidases0.03014Inherited
PapD-like0.9409Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Ribosomal protein L10Direct
Sir2 family of transcriptional regulators0Direct
Heme-dependent catalases0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Cullin repeat0Direct
Carbonic anhydrase0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
SCF ubiquitin ligase complex WHB domain0Direct
D-aminoacid oxidase, N-terminal domain0Direct
14-3-3 protein0Direct
L-aminoacid/polyamine oxidase0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Aminoacid dehydrogenase-like, C-terminal domain0Direct
Histone lysine methyltransferases0.0000000000005309Direct
Nucleosome core histones0.00000000004718Direct
Proteasome subunits0.000009612Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.00001356Direct
Cullin homology domain0.00002998Direct
Erythroid transcription factor GATA-10.00004382Direct
D-aminoacid oxidase-like0.0006855Direct
2Fe-2S ferredoxin domains from multidomain proteins0.0006855Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.002492Inherited
SWIRM domain0.003216Inherited
Group II chaperonin (CCT, TRIC), apical domain0.005931Inherited
L30e/L7ae ribosomal proteins0.01254Inherited
MSP-like0.9417Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Heme-dependent catalase-like0Direct
14-3-3 protein0Direct
SET domain0Direct
Carbonic anhydrase0Direct
Ribosomal protein L10Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Aminoacid dehydrogenase-like, N-terminal domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Histone-fold0.0000000001687Direct
Clavaminate synthase-like0.0000001699Direct
FAD-linked reductases, C-terminal domain0.000001629Direct
"Winged helix" DNA-binding domain0.000001948Direct
Sm-like ribonucleoproteins0.000004116Direct
Cullin homology domain0.00001427Direct
FAD/NAD(P)-binding domain0.00004571Direct
Protein kinase-like (PK-like)0.0001679Direct
4Fe-4S ferredoxins0.0002278Direct
Lamin A/C globular tail domain0.000229Direct
GroEL equatorial domain-like0.0003338Direct
GroEL-intermediate domain like0.0003338Direct
Cullin repeat-like0.0003338Direct
Ferritin-like0.000414Direct
GroEL apical domain-like0.000905Direct
Nucleotide-binding domain0.001115Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.003594Inherited
Seven-hairpin glycosidases0.02647Inherited
PapD-like0.9273Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    51905,56425
  • 51905 - FAD/NAD(P)-binding domain
  • 56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
  • 0Direct
    144232,82199
  • 144232 - HIT/MYND zinc finger-like
  • 82199 - SET domain
  • 0Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    57903,51197
  • 57903 - FYVE/PHD zinc finger
  • 51197 - Clavaminate synthase-like
  • 0Direct
    57903,82199
  • 57903 - FYVE/PHD zinc finger
  • 82199 - SET domain
  • 0Direct
    75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0003338Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0003338Direct
    51905,54373
  • 51905 - FAD/NAD(P)-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0.0005097Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0003338Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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