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Worm Phenotype (WP): life span variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   physiology variant [WBPhenotype:0000519] <7>(494|573) (495|248|68)
+ 1:   organism physiology variant [WBPhenotype:0000576] <10>(354|423) (357|200|60)
0:   life span variant [WBPhenotype:0000039] <6>(26|32) (27|14|3)
- 1:   dauer lifespan variant [WBPhenotype:0001540] <2>(3|3) (3|1|0)
- 1:   extended life span [WBPhenotype:0000061] <1>(5|11) (5|3|0)
- 1:   diet induced life span variant [WBPhenotype:0001837](0|0) (0|0|0)
- 1:   drug induced life span variant [WBPhenotype:0001871](0|0) (0|0|0)
- 1:   shortened life span [WBPhenotype:0001171](5|7) (5|2|0)
- 1:   temperature influenced life span variant [WBPhenotype:0001789](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Aminoacid dehydrogenase-like, N-terminal domain0Direct
14-3-3 protein0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Ribosomal protein L10Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Heme-dependent catalase-like0Direct
SET domain0Direct
Carbonic anhydrase0Direct
Histone-fold0.00000000002501Direct
Clavaminate synthase-like0.0000001044Direct
FAD-linked reductases, C-terminal domain0.0000002461Direct
Sm-like ribonucleoproteins0.000002993Direct
"Winged helix" DNA-binding domain0.000008918Direct
Cullin homology domain0.00001265Direct
FAD/NAD(P)-binding domain0.00003998Direct
4Fe-4S ferredoxins0.000222Direct
Cullin repeat-like0.0002985Direct
GroEL-intermediate domain like0.0002985Direct
GroEL equatorial domain-like0.0002985Direct
GroEL apical domain-like0.0008075Direct
Nucleotide-binding domain0.001077Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.002795Inherited
Seven-hairpin glycosidases0.02587Inherited
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0.06335Inherited
PapD-like0.9929Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cullin repeat0Direct
Ribosomal protein L10Direct
Sir2 family of transcriptional regulators0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
14-3-3 protein0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain0Direct
L-aminoacid/polyamine oxidase0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Heme-dependent catalases0Direct
Carbonic anhydrase0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Aminoacid dehydrogenase-like, C-terminal domain0Direct
SCF ubiquitin ligase complex WHB domain0Direct
Histone lysine methyltransferases0.000000000003281Direct
Nucleosome core histones0.000000000007904Direct
Proteasome subunits0.000005686Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000008478Direct
Cullin homology domain0.00002126Direct
Erythroid transcription factor GATA-10.00002979Direct
2Fe-2S ferredoxin domains from multidomain proteins0.0005431Direct
D-aminoacid oxidase-like0.0005431Direct
Extended AAA-ATPase domain0.0007657Direct
Fatty acid binding protein-like0.0008498Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.001908Inherited
SWIRM domain0.002682Inherited
Group II chaperonin (CCT, TRIC), apical domain0.004606Inherited
L30e/L7ae ribosomal proteins0.01054Inherited
Class I alpha-1;2-mannosidase, catalytic domain0.03372Inherited
Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain0.04798Inherited
MSP-like1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Ribosomal protein L10Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
14-3-3 protein0Direct
Carbonic anhydrase0Direct
Aminoacid dehydrogenase-like, N-terminal domain0Direct
Heme-dependent catalase-like0Direct
SET domain0Direct
Histone-fold0.0000000000196Direct
Clavaminate synthase-like0.00000008306Direct
FAD-linked reductases, C-terminal domain0.0000001964Direct
Sm-like ribonucleoproteins0.000002412Direct
"Winged helix" DNA-binding domain0.000007204Direct
Cullin homology domain0.00001023Direct
FAD/NAD(P)-binding domain0.00003248Direct
4Fe-4S ferredoxins0.0001814Direct
GroEL equatorial domain-like0.0002446Direct
GroEL-intermediate domain like0.0002446Direct
Cullin repeat-like0.0002446Direct
GroEL apical domain-like0.0006667Direct
Protein kinase-like (PK-like)0.0008682Direct
Nucleotide-binding domain0.0008913Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.002342Inherited
Seven-hairpin glycosidases0.02252Inherited
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0.0563Inherited
PapD-like0.9829Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    57903,82199
  • 57903 - FYVE/PHD zinc finger
  • 82199 - SET domain
  • 0Direct
    51905,56425
  • 51905 - FAD/NAD(P)-binding domain
  • 56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
  • 0Direct
    144232,82199
  • 144232 - HIT/MYND zinc finger-like
  • 82199 - SET domain
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0Direct
    75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    57903,51197
  • 57903 - FYVE/PHD zinc finger
  • 51197 - Clavaminate synthase-like
  • 0Direct
    51905,54373
  • 51905 - FAD/NAD(P)-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0.00008731Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0002446Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0002446Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.05213Inherited
    51735,55347
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • 0.0563Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0002446Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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