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Worm Phenotype (WP): organism stress response variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + 2:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ 1:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
0:   organism stress response variant [WBPhenotype:0000067] <20>(75|63) (76|26|7)
- 1:   cell stress response variant [WBPhenotype:0000142] <12>(20|17) (20|7|3)
- 1:   organism pathogen response variant [WBPhenotype:0001012] <10>(22|20) (23|10|3)
- 1:   organism temperature response variant [WBPhenotype:0000146] <10>(17|15) (17|6|1)
- 1:   organism osmotic stress response variant [WBPhenotype:0000876] <6>(10|8) (10|3|1)
- 1:   organism oxidative stress response variant [WBPhenotype:0001620] <6>(7|7) (7|2|0)
- 1:   organism starvation response variant [WBPhenotype:0000147] <5>(3|2) (3|1|0)
- 1:   organism ionizing radiation response variant [WBPhenotype:0000686] <4>(10|5) (10|0|0)
- 1:   anoxia response variant [WBPhenotype:0002424] <3>(1|1) (1|0|0)
- 1:   hypoxia response variant [WBPhenotype:0002423] <3>(10|6) (10|3|0)
- 1:   organism UV response variant [WBPhenotype:0000143] <3>(7|6) (7|4|2)
- 1:   methyl methanesulfonate response variant [WBPhenotype:0000498] <1>(0|0) (0|0|0)
- 1:   organism crowding response variant [WBPhenotype:0000191] <1>(0|0) (0|0|0)
- 1:   organism desiccation response variant [WBPhenotype:0001417] <1>(0|0) (0|0|0)
- 1:   rhythmic tolerance to stress variant [WBPhenotype:0001709] <1>(0|0) (0|0|0)
- 1:   stress induced lethality variant [WBPhenotype:0000139] <1>(2|2) (2|0|0)
- 1:   ethyl methanesulfonate response variant [WBPhenotype:0000499](0|0) (0|0|0)
- 1:   organism electrophilic stress hypersensitive [WBPhenotype:0001634](2|2) (2|1|0)
- 1:   organism hypersensitive interstrand cross link agents [WBPhenotype:0001796](0|0) (0|0|0)
- 1:   organism response to pH variant [WBPhenotype:0001732](0|0) (0|0|0)
- 1:   stress induced arrest variant [WBPhenotype:0000140](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Lipovitellin-phosvitin complex, superhelical domain0Direct
RBP11-like subunits of RNA polymerase0Direct
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Heme-dependent catalase-like0Direct
ValRS/IleRS/LeuRS editing domain0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
HRDC-like0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0000001124Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.00000094Direct
GST C-terminal domain-like0.00002064Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.00003196Direct
PIN domain-like0.00003257Direct
Thioredoxin-like0.00004031Direct
F1F0 ATP synthase subunit C0.0002054Direct
ARID-like0.0002054Direct
Aquaporin-like0.0003418Direct
Class II aaRS ABD-related0.0006112Direct
Cysteine-rich domain0.0009123Direct
Di-copper centre-containing domain0.001003Inherited
PLC-like phosphodiesterases0.002891Inherited
NAD kinase/diacylglycerol kinase-like0.003196Inherited
Class II aaRS and biotin synthetases0.003783Inherited
Saposin0.004527Inherited
PH domain-like0.005304Inherited
Nucleotidylyl transferase0.008941Inherited
HSP20-like chaperones0.009603Inherited
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.01269Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.0241Inherited
ACP-like0.02458Inherited
DBL homology domain (DH-domain)0.02994Inherited
GroEL-intermediate domain like0.03807Inherited
GroEL equatorial domain-like0.03807Inherited
GroEL apical domain-like0.03807Inherited
Multidrug resistance efflux transporter EmrE0.04393Inherited
Bromodomain0.05978Inherited
Hect, E3 ligase catalytic domain0.09343Inherited
RING/U-box0.1053Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.1101Inherited
Chromo domain-like0.1129Inherited
Ankyrin repeat0.1164Inherited
Periplasmic binding protein-like II0.1351Inherited
Heme-dependent peroxidases0.1453Inherited
HD-domain/PDEase-like0.1453Inherited
Histone-fold0.1801Inherited
(Trans)glycosidases0.2121Inherited
Arginase/deacetylase0.2239Inherited
PYP-like sensor domain (PAS domain)0.2239Inherited
DEATH domain0.2666Inherited
DNA/RNA polymerases0.2666Inherited
RNA-binding domain, RBD0.2794Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.2833Inherited
Nucleic acid-binding proteins0.3098Inherited
FAD/NAD(P)-binding domain0.3181Inherited
Leucine zipper domain0.3586Inherited
Quinoprotein alcohol dehydrogenase-like0.3653Inherited
Sm-like ribonucleoproteins0.3653Inherited
FYVE/PHD zinc finger0.3785Inherited
PLP-dependent transferases0.4248Inherited
Lipocalins0.4654Inherited
cAMP-binding domain-like0.4654Inherited
Insulin-like0.6007Inherited
WD40 repeat-like0.7164Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.7466Inherited
HLH, helix-loop-helix DNA-binding domain0.8468Inherited
Metallo-dependent phosphatases0.8694Inherited
Cysteine proteinases0.9585Inherited
Protein kinase-like (PK-like)0.972Inherited
Periplasmic binding protein-like I0.9866Inherited
P-loop containing nucleoside triphosphate hydrolases0.9922Inherited
Nicotinic receptor ligand binding domain-like1Inherited
EF-hand1Inherited
Neurotransmitter-gated ion-channel transmembrane pore1Inherited
MFS general substrate transporter1Inherited
Nucleotide cyclase1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
ValRS/IleRS/LeuRS editing domain0Direct
Heme-dependent catalases0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
RNA-polymerase beta0Direct
Mammalian PLC0Direct
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0Direct
5' to 3' exonuclease catalytic domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
Arginine methyltransferase0Direct
PLC-like (P variant)0.0000005456Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.00000195Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.000002817Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000002817Direct
Tandem AAA-ATPase domain0.000003027Direct
Phoshoinositide 3-kinase (PI3K), catalytic domain0.00001429Direct
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.00002907Direct
Aquaporin-like0.00007139Direct
Erythroid transcription factor GATA-10.0002622Direct
ARID domain0.000338Direct
F1F0 ATP synthase subunit C0.000338Direct
Glutathione S-transferase (GST), C-terminal domain0.0005923Direct
Glutathione S-transferase (GST), N-terminal domain0.0009014Direct
Hemocyanin middle domain0.001837Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.002648Inherited
Pleckstrin-homology domain (PH domain)0.009697Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.00976Inherited
HSP200.01018Inherited
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.0181Inherited
DBL homology domain (DH-domain)0.02267Inherited
Group II chaperonin (CCT, TRIC), apical domain0.04798Inherited
Bromodomain0.04798Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.04798Inherited
RING finger domain, C3HC40.06108Inherited
Rhodopsin-like0.0695Inherited
Hect, E3 ligase catalytic domain0.07677Inherited
FAD/NAD-linked reductases, N-terminal and central domains0.07677Inherited
Fatty acid binding protein-like0.07677Inherited
Armadillo repeat0.07677Inherited
Ankyrin repeat0.0912Inherited
Phosphate binding protein-like0.1118Inherited
Myeloperoxidase-like0.1223Inherited
PDEase0.1223Inherited
Nucleosome core histones0.15Inherited
Glutathione peroxidase-like0.1605Inherited
PHD domain0.1866Inherited
Group II chaperonin (CCT, TRIC), intermediate domain0.1946Inherited
Histone deacetylase, HDAC0.1946Inherited
EF-hand modules in multidomain proteins0.1946Inherited
Chromo domain0.2513Inherited
Canonical RBD0.2778Inherited
Proteasome subunits0.3166Inherited
Leucine zipper domain0.3166Inherited
cAMP-binding domain0.4237Inherited
WD40-repeat0.4442Inherited
Insulin-like0.5559Inherited
HLH, helix-loop-helix DNA-binding domain0.8101Inherited
Protein kinases, catalytic subunit0.9343Inherited
Nicotinic receptor ligand binding domain-like1Inherited
L-arabinose binding protein-like1Inherited
G proteins1Inherited
Neurotransmitter-gated ion-channel transmembrane pore1Inherited


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Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ValRS/IleRS/LeuRS editing domain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Heme-dependent catalase-like0Direct
RBP11-like subunits of RNA polymerase0Direct
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
HRDC-like0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.00000009003Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0000007594Direct
GST C-terminal domain-like0.00001682Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.00002609Direct
PIN domain-like0.00002659Direct
Thioredoxin-like0.00003294Direct
F1F0 ATP synthase subunit C0.0001688Direct
ARID-like0.0001688Direct
Aquaporin-like0.0002817Direct
Class II aaRS ABD-related0.0005064Direct
Cysteine-rich domain0.000759Direct
Di-copper centre-containing domain0.0008351Direct
PLC-like phosphodiesterases0.002439Inherited
NAD kinase/diacylglycerol kinase-like0.002699Inherited
Class II aaRS and biotin synthetases0.003205Inherited
Saposin0.003843Inherited
PH domain-like0.004509Inherited
Nucleotidylyl transferase0.007673Inherited
HSP20-like chaperones0.008252Inherited
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.01096Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.02105Inherited
ACP-like0.02149Inherited
DBL homology domain (DH-domain)0.02629Inherited
GroEL equatorial domain-like0.03356Inherited
GroEL apical domain-like0.03356Inherited
GroEL-intermediate domain like0.03356Inherited
Multidrug resistance efflux transporter EmrE0.03881Inherited
Bromodomain0.05322Inherited
Hect, E3 ligase catalytic domain0.08419Inherited
RING/U-box0.09519Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.09966Inherited
Chromo domain-like0.1022Inherited
Ankyrin repeat0.1056Inherited
Periplasmic binding protein-like II0.123Inherited
Heme-dependent peroxidases0.1325Inherited
HD-domain/PDEase-like0.1325Inherited
Histone-fold0.1654Inherited
(Trans)glycosidases0.1958Inherited
PYP-like sensor domain (PAS domain)0.207Inherited
Arginase/deacetylase0.207Inherited
DNA/RNA polymerases0.2485Inherited
DEATH domain0.2485Inherited
RNA-binding domain, RBD0.2608Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.2647Inherited
Nucleic acid-binding proteins0.2904Inherited
FAD/NAD(P)-binding domain0.2986Inherited
Leucine zipper domain0.3383Inherited
Quinoprotein alcohol dehydrogenase-like0.345Inherited
Sm-like ribonucleoproteins0.345Inherited
FYVE/PHD zinc finger0.358Inherited
PLP-dependent transferases0.404Inherited
Lipocalins0.4443Inherited
cAMP-binding domain-like0.4443Inherited
Insulin-like0.5789Inherited
WD40 repeat-like0.6959Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.7268Inherited
HLH, helix-loop-helix DNA-binding domain0.8297Inherited
Metallo-dependent phosphatases0.8532Inherited
Cysteine proteinases0.9454Inherited
Protein kinase-like (PK-like)0.96Inherited
Periplasmic binding protein-like I0.9756Inherited
P-loop containing nucleoside triphosphate hydrolases0.9817Inherited
MFS general substrate transporter1Inherited
Nucleotide cyclase1Inherited
Tubulin C-terminal domain-like1Inherited
Nicotinic receptor ligand binding domain-like1Inherited
EF-hand1Inherited
Neurotransmitter-gated ion-channel transmembrane pore1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47473,51695
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    50677,52374
  • 50677 - ValRS/IleRS/LeuRS editing domain
  • 52374 - Nucleotidylyl transferase
  • 0Direct
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0Direct
    50729,47473
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0Direct
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.00000009003Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.00009505Direct
    57889,57889
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.0001005Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0001512Direct
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.0001688Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001072Inherited
    51905,55424
  • 51905 - FAD/NAD(P)-binding domain
  • 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain
  • 0.01096Inherited
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.01317Inherited
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.02149Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.03356Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.03356Inherited
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.1235Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.1325Inherited
    53300,56436
  • 53300 - vWA-like
  • 56436 - C-type lectin-like
  • 0.2108Inherited
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 1Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0Direct
    50729,47473,51695
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.00000009003Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001072Inherited
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001072Inherited
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.03356Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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