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Worm Phenotype (WP): body morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Variant [WBPhenotype:0000886] <4>
+ 1:   morphology variant [WBPhenotype:0000520] <9>(441|523) (441|229|64)
0:   body morphology variant [WBPhenotype:0000072] <17>(67|65) (70|23|11)
- 1:   dauer body morphology variant [WBPhenotype:0001545] <8>(0|0) (0|0|0)
- 1:   tail morphology variant [WBPhenotype:0000073] <8>(13|12) (13|3|0)
- 1:   body size variant [WBPhenotype:0000231] <6>(33|37) (34|10|7)
- 1:   head morphology variant [WBPhenotype:0000071] <6>(2|0) (2|0|0)
- 1:   egg morphology variant [WBPhenotype:0000037] <4>(3|3) (3|3|0)
- 1:   pigmentation variant [WBPhenotype:0000521] <4>(12|5) (13|3|1)
- 1:   body axis morphology variant [WBPhenotype:0000581] <2>(3|3) (3|1|0)
- 1:   sexually dimorphic morphology variant [WBPhenotype:0001023] <2>(13|13) (13|4|1)
- 1:   body constriction [WBPhenotype:0000212] <1>(0|0) (0|0|0)
- 1:   body vacuole [WBPhenotype:0001395] <1>(3|3) (3|0|0)
- 1:   larval body morphology variant [WBPhenotype:0000035] <1>(1|1) (1|0|0)
- 1:   body protrusions [WBPhenotype:0000453](0|0) (0|0|0)
- 1:   body twisted [WBPhenotype:0001295](0|0) (0|0|0)
- 1:   lumpy [WBPhenotype:0000406](0|0) (0|0|0)
- 1:   maternal effect morphology variant [WBPhenotype:0002458](0|0) (0|0|0)
- 1:   organism morphology variable [WBPhenotype:0000409](1|1) (1|0|0)
- 1:   pseudocoelom morphology variant [WBPhenotype:0000949](2|0) (2|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Skp1 dimerisation domain-like8.891e-16Direct
Transducin (alpha subunit), insertion domain0.000000000000007977Direct
Homeodomain-like0.000000002312Direct
Insulin-like0.00000003868Direct
ARM repeat0.0000001355Direct
DBL homology domain (DH-domain)0.0000001535Direct
Immunoglobulin0.0000005917Direct
Hedgehog/intein (Hint) domain0.0000007498Direct
PH domain-like0.0000009086Direct
Lamin A/C globular tail domain0.000003489Direct
SMAD MH1 domain0.00002744Direct
Sema domain0.00002744Direct
SNF-like0.00003908Direct
Growth factor receptor domain0.00005322Direct
Intermediate filament protein, coiled coil region0.00005983Direct
SNARE-like0.0000777Direct
Zn-binding ribosomal proteins0.0001346Direct
P-loop containing nucleoside triphosphate hydrolases0.0001591Direct
Subtilisin-like0.0001812Direct
Cyclin-like0.0006599Direct
lambda repressor-like DNA-binding domains0.0006714Direct
Spectrin repeat0.0006714Direct
"Winged helix" DNA-binding domain0.0007878Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0008381Direct
Plexin repeat0.0008875Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0008875Direct
Nucleotide-binding domain0.0008875Direct
Translation proteins0.0008949Direct
HLH, helix-loop-helix DNA-binding domain0.0009615Direct
LuxS/MPP-like metallohydrolase0.001136Inherited
Transducin (heterotrimeric G protein), gamma chain0.001161Inherited
S-adenosylmethionine synthetase0.001161Inherited
GroEL-intermediate domain like0.001331Inherited
Arginase/deacetylase0.001331Inherited
GroEL equatorial domain-like0.001331Inherited
Multidrug resistance efflux transporter EmrE0.00203Inherited
RNA-binding domain, RBD0.002235Inherited
GroEL apical domain-like0.002796Inherited
cAMP-binding domain-like0.004207Inherited
Frizzled cysteine-rich domain0.004691Inherited
Tim10-like0.004691Inherited
Nicotinic receptor ligand binding domain-like0.005224Inherited
TPR-like0.005234Inherited
Troponin coil-coiled subunits0.005687Inherited
PYP-like sensor domain (PAS domain)0.005687Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.01074Inherited
PreATP-grasp domain0.01074Inherited
Heme-dependent peroxidases0.01365Inherited
Sm-like ribonucleoproteins0.02016Inherited
beta-beta-alpha zinc fingers0.02422Inherited
SMAD/FHA domain0.02492Inherited
Ankyrin repeat0.03604Inherited
FYVE/PHD zinc finger0.06445Inherited
ClpP/crotonase0.0665Inherited
Cysteine-rich domain0.07305Inherited
Lipocalins0.1083Inherited
Protease propeptides/inhibitors0.11Inherited
Cysteine-rich DNA binding domain, (DM domain)0.11Inherited
Glutathione synthetase ATP-binding domain-like0.1462Inherited
Voltage-gated potassium channels0.1844Inherited
Histone-fold0.2337Inherited
Protein kinase-like (PK-like)0.5125Inherited
POZ domain0.7659Inherited
Thioredoxin-like0.9663Inherited
C-type lectin-like1Inherited
GST C-terminal domain-like1Inherited


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Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
MIF4G domain-like0Direct
D-aminoacid oxidase, N-terminal domain0Direct
RhoGDI-like0Direct
POU-specific domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Sema domain0Direct
Skp1 dimerisation domain-like0.00000000000000156Direct
Transducin (alpha subunit), insertion domain0.0000000000002441Direct
Homeodomain0.000000003102Direct
Insulin-like0.0000004543Direct
G proteins0.0000008504Direct
DBL homology domain (DH-domain)0.0000011Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.000002882Direct
Pleckstrin-homology domain (PH domain)0.000003299Direct
Clathrin coat assembly domain0.00001117Direct
Laminin-type module0.00006234Direct
SMAD MH1 domain0.00006234Direct
SNF-like0.00007056Direct
SMAD domain0.00007273Direct
I set domains0.0001773Direct
Intermediate filament protein, coiled coil region0.0001803Direct
Lamin A/C globular tail domain0.0002675Direct
Subtilases0.000343Direct
D-aminoacid oxidase-like0.000343Direct
Clathrin adaptor core protein0.0003524Direct
Growth factor receptor domain0.0005461Direct
Cyclin0.0005793Direct
Histone deacetylase, HDAC0.001149Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.001149Inherited
PDI-like0.001655Inherited
Plexin repeat0.001655Inherited
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.001655Inherited
Troponin I0.001856Inherited
Proprotein convertase P-domain0.001856Inherited
Glycosyl transferases group 10.001856Inherited
S-adenosylmethionine synthetase0.001856Inherited
Transducin (heterotrimeric G protein), gamma chain0.001856Inherited
MPP-like0.002791Inherited
Group II chaperonin (CCT, TRIC), apical domain0.002823Inherited
Forkhead DNA-binding domain0.004556Inherited
Spectrin repeat0.005824Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.005849Inherited
cAMP-binding domain0.005849Inherited
BTB/POZ domain0.006377Inherited
Frizzled cysteine-rich domain0.007462Inherited
Tim10/DDP0.007462Inherited
Transforming growth factor (TGF)-beta0.007462Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.00957Inherited
Canonical RBD0.01051Inherited
Nicotinic receptor ligand binding domain-like0.01216Inherited
CUT domain0.01828Inherited
Myeloperoxidase-like0.02699Inherited
Pumilio repeat0.0319Inherited
Classic zinc finger, C2H20.0413Inherited
Tetratricopeptide repeat (TPR)0.04764Inherited
Ankyrin repeat0.1349Inherited
Cysteine-rich DNA binding domain, (DM domain)0.1628Inherited
Synaptotagmin-like (S variant)0.1921Inherited
Fatty acid binding protein-like0.207Inherited
Voltage-gated potassium channels0.3843Inherited
Nucleosome core histones0.4712Inherited
Rhodopsin-like0.6186Inherited
Protein kinases, catalytic subunit0.8226Inherited
C-type lectin domain1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Skp1 dimerisation domain-like7.012e-16Direct
Transducin (alpha subunit), insertion domain0.000000000000006296Direct
Homeodomain-like0.000000001851Direct
Insulin-like0.00000003116Direct
ARM repeat0.0000001094Direct
DBL homology domain (DH-domain)0.000000124Direct
Immunoglobulin0.0000004801Direct
Hedgehog/intein (Hint) domain0.0000006095Direct
PH domain-like0.000000739Direct
Lamin A/C globular tail domain0.000002851Direct
SMAD MH1 domain0.00002254Direct
Sema domain0.00002254Direct
SNF-like0.00003214Direct
Growth factor receptor domain0.00004383Direct
Intermediate filament protein, coiled coil region0.00004929Direct
SNARE-like0.00006405Direct
Zn-binding ribosomal proteins0.0001112Direct
P-loop containing nucleoside triphosphate hydrolases0.0001314Direct
Subtilisin-like0.0001497Direct
Cyclin-like0.0005505Direct
lambda repressor-like DNA-binding domains0.0005605Direct
Spectrin repeat0.0005605Direct
"Winged helix" DNA-binding domain0.0006588Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0007012Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0007429Direct
Nucleotide-binding domain0.0007429Direct
Plexin repeat0.0007429Direct
Translation proteins0.0007492Direct
HLH, helix-loop-helix DNA-binding domain0.0008056Direct
LuxS/MPP-like metallohydrolase0.0009522Direct
DNA ligase/mRNA capping enzyme, catalytic domain0.0009727Direct
Transducin (heterotrimeric G protein), gamma chain0.0009727Direct
S-adenosylmethionine synthetase0.0009727Direct
GroEL equatorial domain-like0.001116Inherited
Arginase/deacetylase0.001116Inherited
GroEL-intermediate domain like0.001116Inherited
Multidrug resistance efflux transporter EmrE0.001711Inherited
RNA-binding domain, RBD0.001887Inherited
GroEL apical domain-like0.002366Inherited
EGF/Laminin0.002642Inherited
cAMP-binding domain-like0.003576Inherited
Tim10-like0.00399Inherited
Frizzled cysteine-rich domain0.00399Inherited
Nicotinic receptor ligand binding domain-like0.004452Inherited
TPR-like0.004461Inherited
PYP-like sensor domain (PAS domain)0.004849Inherited
Troponin coil-coiled subunits0.004849Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.009248Inherited
PreATP-grasp domain0.009248Inherited
Heme-dependent peroxidases0.0118Inherited
Sm-like ribonucleoproteins0.01754Inherited
beta-beta-alpha zinc fingers0.02116Inherited
SMAD/FHA domain0.02179Inherited
Ankyrin repeat0.03178Inherited
Translation proteins SH3-like domain0.03216Inherited
FYVE/PHD zinc finger0.05751Inherited
ClpP/crotonase0.05941Inherited
Cysteine-rich domain0.06541Inherited
Lipocalins0.09802Inherited
Protease propeptides/inhibitors0.09957Inherited
Cysteine-rich DNA binding domain, (DM domain)0.09957Inherited
Glutathione synthetase ATP-binding domain-like0.1336Inherited
Voltage-gated potassium channels0.1695Inherited
Histone-fold0.2164Inherited
Protein kinase-like (PK-like)0.4904Inherited
POZ domain0.7461Inherited
Thioredoxin-like0.9537Inherited
C-type lectin-like1Inherited
GST C-terminal domain-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 3.509e-16Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000000000000006296Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.00000008572Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000003085Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.000005518Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.000005909Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.0002406Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.0007012Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.0009522Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0009727Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0009727Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0009727Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0009727Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.001116Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001116Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.001711Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.002176Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.002763Inherited
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0118Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.02224Inherited
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48452,48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0007429Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0007492Direct
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0009727Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0009727Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.001004Inherited
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001116Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.002366Inherited
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.004393Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.02454Inherited
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.2183Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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