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Worm Phenotype (WP): lineage variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + 2:   development variant [WBPhenotype:0000518] <6>(507|580) (507|247|68)
+ 1:   cell development variant [WBPhenotype:0000529] <17>(120|122) (121|48|12)
0:   lineage variant [WBPhenotype:0000093] <2>(8|7) (8|0|0)
- 1:   postembryonic cell lineage variant [WBPhenotype:0000825] <12>(5|3) (5|0|0)
- 1:   embryonic cell lineage variant [WBPhenotype:0000824] <7>(2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000007891Direct
p53-like transcription factors0.0005277Direct
beta-beta-alpha zinc fingers0.001041Inherited
HMG-box0.005855Inherited
CCCH zinc finger0.01179Inherited
E set domains0.01325Inherited
Protein kinase-like (PK-like)0.1779Inherited
ARM repeat0.3862Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000002135Direct
Erythroid transcription factor GATA-10.00001865Direct
Classic zinc finger, C2H20.0008745Direct
HMG-box0.006038Inherited
CCCH zinc finger0.01224Inherited
Extended AAA-ATPase domain0.02046Inherited
Protein kinases, catalytic subunit0.1588Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000006344Direct
p53-like transcription factors0.0004378Direct
beta-beta-alpha zinc fingers0.0008687Direct
HMG-box0.004991Inherited
CCCH zinc finger0.01018Inherited
E set domains0.01146Inherited
Protein kinase-like (PK-like)0.1634Inherited
ARM repeat0.3656Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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