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Worm Phenotype (WP): gut granule development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <5>
+ + + + 4:   organ system development variant [WBPhenotype:0000530] <9>(78|72) (81|32|12)
+ + + 3:   alimentary system development variant [WBPhenotype:0000617] <6>(12|9) (13|5|3)
+ + + 3:   development variant [WBPhenotype:0000518] <4>(506|581) (506|253|70)
+ + 2:   cell development variant [WBPhenotype:0000529] <16>(117|119) (118|47|13)
+ + 2:   intestinal development variant [WBPhenotype:0000708] <4>(10|8) (11|5|3)
+ 1:   intestinal cell development variant [WBPhenotype:0000705] <3>(4|3) (5|2|2)
0:   gut granule development variant [WBPhenotype:0000103] <2>(4|3) (5|2|2)
- 1:   gut granule biogenesis reduced [WBPhenotype:0000706](3|3) (3|2|2)
- 1:   no gut granules [WBPhenotype:0000483](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ABC transporter transmembrane region0.000002146Direct
SNARE-like0.0000134Direct
BAR/IMD domain-like0.0001713Direct
FYVE/PHD zinc finger0.002634Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Clathrin coat assembly domain0.0000008192Direct
ABC transporter transmembrane region0.000002403Direct
ABC transporter ATPase domain-like0.0001461Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ABC transporter transmembrane region0.000001731Direct
SNARE-like0.00001085Direct
BAR/IMD domain-like0.0001399Direct
PH domain-like0.0009948Direct
FYVE/PHD zinc finger0.002209Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.000001468Direct
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000001731Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000001468Direct
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.000001468Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)