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Worm Phenotype (WP): gene expression level reduced

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + 2:   organism metabolism processing variant [WBPhenotype:0000027] <25>(178|190) (182|87|26)
+ 1:   gene expression variant [WBPhenotype:0000717] <11>(127|139) (131|64|20)
0:   gene expression level reduced [WBPhenotype:0000134] <1>(6|3) (6|0|0)
- 1:   tRNA expression decreased [WBPhenotype:0002353](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
PYP-like sensor domain (PAS domain)0.00001591Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00006039Direct
Nuclear receptor ligand-binding domain0.0001561Direct
SAM/Pointed domain0.0002882Direct
HLH, helix-loop-helix DNA-binding domain0.0006681Direct
p53-like transcription factors0.0007862Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nuclear receptor ligand-binding domain0.0001567Direct
Nuclear receptor0.0006165Direct
HLH, helix-loop-helix DNA-binding domain0.0006859Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PYP-like sensor domain (PAS domain)0.00001296Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00004943Direct
Nuclear receptor ligand-binding domain0.0001281Direct
SAM/Pointed domain0.0002372Direct
HLH, helix-loop-helix DNA-binding domain0.0005539Direct
p53-like transcription factors0.0006537Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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