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Worm Phenotype (WP): pericellular component development variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ 1:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
0:   pericellular component development variant [WBPhenotype:0000200] <4>(31|39) (31|15|5)
- 1:   cuticle development variant [WBPhenotype:0000201] <4>(4|3) (4|0|0)
- 1:   basement membrane remodeling variant [WBPhenotype:0002065] <1>(25|35) (25|15|5)
- 1:   connective tissue development variant [WBPhenotype:0000897](0|0) (0|0|0)
- 1:   pseudocoelom development variant [WBPhenotype:0000855](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
BPTI-like0Direct
Blood coagulation inhibitor (disintegrin)0Direct
Metalloproteases ("zincins"), catalytic domain0Direct
Zn-dependent exopeptidases0Direct
PGBD-like0Direct
Carboxypeptidase regulatory domain-like0Direct
Acid proteases0.00000000000001386Direct
Cysteine proteinases0.0000000000007876Direct
Protease propeptides/inhibitors0.000000000009504Direct
alpha/beta-Hydrolases0.00000000001317Direct
Creatinase/aminopeptidase0.0000000002321Direct
Trypsin-like serine proteases0.000000001647Direct
Hedgehog/intein (Hint) domain0.00000001771Direct
TSP-1 type 1 repeat0.0000001328Direct
Bacterial exopeptidase dimerisation domain0.0000001445Direct
Subtilisin-like0.0000001445Direct
DPP6 N-terminal domain-like0.0000002248Direct
Serine protease inhibitors0.0000002801Direct
Hemopexin-like domain0.0000008182Direct
LuxS/MPP-like metallohydrolase0.0000035Direct
Integrin domains0.000004115Direct
Spermadhesin, CUB domain0.000006321Direct
Serpins0.00001672Direct
Thyroglobulin type-1 domain0.00005458Direct
SMAD MH1 domain0.00005458Direct
beta-lactamase/transpeptidase-like0.00008155Direct
Leukotriene A4 hydrolase N-terminal domain0.0003788Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0007544Direct
SMAD/FHA domain0.00218Inherited
PAZ domain0.03171Inherited
Protein kinase-like (PK-like)0.9807Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Matrix metalloproteases, catalytic domain0Direct
DPP6 catalytic domain-like0Direct
Blood coagulation inhibitor (disintegrin)0Direct
DPP6 N-terminal domain-like0Direct
Acylamino-acid-releasing enzyme, C-terminal donain0Direct
Astacin0Direct
Carboxypeptidase regulatory domain0Direct
Neutral endopeptidase (neprilysin)0Direct
Proprotein convertase P-domain0Direct
Methionine aminopeptidase, insert domain0Direct
Small Kunitz-type inhibitors & BPTI-like toxins0Direct
Papain-like0Direct
Integrin domains0Direct
Pepsin-like0.000000000000009374Direct
Pancreatic carboxypeptidases0.0000000000035Direct
Reprolysin-like0.0000000000312Direct
Bacterial dinuclear zinc exopeptidases0.0000000002681Direct
Creatinase/aminopeptidase0.00000000128Direct
Serine carboxypeptidase-like0.000000005488Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.00000007479Direct
Subtilases0.0000003755Direct
Bacterial exopeptidase dimerisation domain0.0000003755Direct
TSP-1 type 1 repeat0.000001027Direct
Hemopexin-like domain0.000002116Direct
Pancreatic carboxypeptidase, activation domain0.000006988Direct
MPP-like0.00001119Direct
Eukaryotic proteases0.00001756Direct
SMAD domain0.00001761Direct
Serpins0.00003299Direct
beta-Lactamase/D-ala carboxypeptidase0.00003761Direct
ATI-like0.00003761Direct
Thyroglobulin type-1 domain0.0001097Direct
SMAD MH1 domain0.0001097Direct
Gamma-glutamyltranspeptidase-like0.0001097Direct
Spermadhesin, CUB domain0.000159Direct
Acetylcholinesterase-like0.0005584Direct
Leukotriene A4 hydrolase N-terminal domain0.001223Inherited
Leukotriene A4 hydrolase catalytic domain0.001223Inherited
Protein kinases, catalytic subunit1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Zn-dependent exopeptidases0Direct
PGBD-like0Direct
Metalloproteases ("zincins"), catalytic domain0Direct
BPTI-like0Direct
Carboxypeptidase regulatory domain-like0Direct
Blood coagulation inhibitor (disintegrin)0Direct
Acid proteases0.00000000000001087Direct
Cysteine proteinases0.0000000000006201Direct
Protease propeptides/inhibitors0.000000000007499Direct
alpha/beta-Hydrolases0.00000000001039Direct
Creatinase/aminopeptidase0.0000000001839Direct
Trypsin-like serine proteases0.000000001309Direct
Hedgehog/intein (Hint) domain0.00000001413Direct
TSP-1 type 1 repeat0.0000001064Direct
Bacterial exopeptidase dimerisation domain0.0000001159Direct
Subtilisin-like0.0000001159Direct
DPP6 N-terminal domain-like0.0000001807Direct
Serine protease inhibitors0.0000002252Direct
Hemopexin-like domain0.0000006605Direct
LuxS/MPP-like metallohydrolase0.000002841Direct
Integrin domains0.000003343Direct
Spermadhesin, CUB domain0.000005138Direct
Serpins0.00001363Direct
Thyroglobulin type-1 domain0.00004467Direct
SMAD MH1 domain0.00004467Direct
beta-lactamase/transpeptidase-like0.00006675Direct
Leukotriene A4 hydrolase N-terminal domain0.0003124Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0006268Direct
SMAD/FHA domain0.001831Inherited
PAZ domain0.02787Inherited
Protein kinase-like (PK-like)0.969Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55486,49854
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 49854 - Spermadhesin, CUB domain
  • 0Direct
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0Direct
    54897,52743
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 0Direct
    53187,49464
  • 53187 - Zn-dependent exopeptidases
  • 49464 - Carboxypeptidase regulatory domain-like
  • 0Direct
    55920,46785
  • 55920 - Creatinase/aminopeptidase
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    55486,57552
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 57552 - Blood coagulation inhibitor (disintegrin)
  • 0Direct
    57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0.0000000000001461Direct
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0.000000003927Direct
    82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.00000001413Direct
    54897,53187
  • 54897 - Protease propeptides/inhibitors
  • 53187 - Zn-dependent exopeptidases
  • 0.0000001013Direct
    53187,55031
  • 53187 - Zn-dependent exopeptidases
  • 55031 - Bacterial exopeptidase dimerisation domain
  • 0.0000001159Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.000002841Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.0001553Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57362,57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0Direct
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0Direct
    54897,52743,49785
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    82895,82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.00000001413Direct
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.00001569Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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