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Worm Phenotype (WP): body size variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|64)
+ + + 3:   organism morphology variant [WBPhenotype:0000535] <7>(321|428) (322|184|50)
+ + 2:   organism segment morphology variant [WBPhenotype:0000582] <3>(44|48) (45|15|7)
+ + 2:   body region morphology variant [WBPhenotype:0000532] <6>(46|48) (47|17|7)
+ 1:   body morphology variant [WBPhenotype:0000072] <9>(35|42) (36|11|7)
0:   body size variant [WBPhenotype:0000231] <6>(32|38) (33|9|7)
- 1:   body width variant [WBPhenotype:0001727] <4>(29|34) (30|7|7)
- 1:   body length variant [WBPhenotype:0001726] <3>(23|30) (24|6|4)
- 1:   body proportion variant [WBPhenotype:0002338] <2>(0|0) (0|0|0)
- 1:   large [WBPhenotype:0000319] <1>(1|2) (2|1|0)
- 1:   scrawny [WBPhenotype:0000314](0|0) (0|0|0)
- 1:   squat [WBPhenotype:0000021](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Hedgehog/intein (Hint) domain0.00000001309Direct
SNF-like0.0000005852Direct
Lamin A/C globular tail domain0.000001899Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000001982Direct
Nicotinic receptor ligand binding domain-like0.00002183Direct
Intermediate filament protein, coiled coil region0.00003643Direct
Spectrin repeat0.00003643Direct
SMAD MH1 domain0.0001022Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0001022Direct
Nucleotide-binding domain0.0001022Direct
Growth factor receptor domain0.0001449Direct
PH domain-like0.0001522Direct
S-adenosylmethionine synthetase0.0002002Direct
Transducin (heterotrimeric G protein), gamma chain0.0002002Direct
Zn-binding ribosomal proteins0.0003163Direct
Subtilisin-like0.0008663Direct
Tim10-like0.0008663Direct
DBL homology domain (DH-domain)0.001689Inherited
PYP-like sensor domain (PAS domain)0.008329Inherited
Heme-dependent peroxidases0.009817Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.01334Inherited
Histone-fold0.02312Inherited
Protease propeptides/inhibitors0.02812Inherited
SMAD/FHA domain0.03017Inherited
Ankyrin repeat0.4212Inherited
Voltage-gated potassium channels0.4212Inherited
cAMP-binding domain-like0.8072Inherited
SNARE-like0.8072Inherited
Insulin-like0.8082Inherited
Troponin coil-coiled subunits0.8585Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.00000006121Direct
SNF-like0.000001286Direct
Laminin-type module0.000004691Direct
Pleckstrin-homology domain (PH domain)0.00003598Direct
D-aminoacid oxidase-like0.00004039Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00005925Direct
Nicotinic receptor ligand binding domain-like0.00007916Direct
Intermediate filament protein, coiled coil region0.0001065Direct
PDI-like0.0002097Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0002097Direct
SMAD MH1 domain0.0002097Direct
Lamin A/C globular tail domain0.0002641Direct
S-adenosylmethionine synthetase0.000341Direct
Transducin (heterotrimeric G protein), gamma chain0.000341Direct
Glycosyl transferases group 10.000341Direct
MIF4G domain-like0.000341Direct
Proprotein convertase P-domain0.000341Direct
Spectrin repeat0.000581Direct
Clathrin adaptor core protein0.0006399Direct
Transforming growth factor (TGF)-beta0.001466Inherited
Subtilases0.001466Inherited
Tim10/DDP0.001466Inherited
SMAD domain0.001494Inherited
DBL homology domain (DH-domain)0.004375Inherited
Rhodopsin-like0.01765Inherited
Myeloperoxidase-like0.0186Inherited
Synaptotagmin-like (S variant)0.04481Inherited
G proteins0.09614Inherited
Nucleosome core histones0.1015Inherited
Ankyrin repeat0.4403Inherited
Voltage-gated potassium channels0.4675Inherited
cAMP-binding domain0.8096Inherited
Clathrin coat assembly domain0.8096Inherited
Insulin-like0.8264Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Hedgehog/intein (Hint) domain0.00000001043Direct
SNF-like0.0000004716Direct
Lamin A/C globular tail domain0.000001538Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000001605Direct
Nicotinic receptor ligand binding domain-like0.00001779Direct
Spectrin repeat0.00002973Direct
Intermediate filament protein, coiled coil region0.00002973Direct
Nucleotide-binding domain0.0000837Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0000837Direct
SMAD MH1 domain0.0000837Direct
Growth factor receptor domain0.0001189Direct
PH domain-like0.0001249Direct
Transducin (heterotrimeric G protein), gamma chain0.0001643Direct
S-adenosylmethionine synthetase0.0001643Direct
Zn-binding ribosomal proteins0.0002605Direct
Tim10-like0.0007205Direct
Subtilisin-like0.0007205Direct
DBL homology domain (DH-domain)0.001413Inherited
PYP-like sensor domain (PAS domain)0.007132Inherited
Heme-dependent peroxidases0.008437Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.01152Inherited
Histone-fold0.02017Inherited
Protease propeptides/inhibitors0.02464Inherited
SMAD/FHA domain0.02648Inherited
EGF/Laminin0.3747Inherited
Voltage-gated potassium channels0.4003Inherited
Ankyrin repeat0.4003Inherited
SNARE-like0.7889Inherited
cAMP-binding domain-like0.7889Inherited
Insulin-like0.79Inherited
Troponin coil-coiled subunits0.842Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.000001605Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0001643Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001643Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0001643Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0002272Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0002605Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.001198Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0000837Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001643Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0003961Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0004905Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.01731Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.02464Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.6904Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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