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Worm Phenotype (WP): body size variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + 3:   organism morphology variant [WBPhenotype:0000535] <7>(321|428) (322|184|49)
+ + 2:   body region morphology variant [WBPhenotype:0000532] <6>(46|48) (47|17|7)
+ + 2:   organism segment morphology variant [WBPhenotype:0000582] <3>(44|48) (45|15|7)
+ 1:   body morphology variant [WBPhenotype:0000072] <9>(35|42) (36|11|7)
0:   body size variant [WBPhenotype:0000231] <6>(32|38) (33|9|7)
- 1:   body width variant [WBPhenotype:0001727] <4>(29|34) (30|7|7)
- 1:   body length variant [WBPhenotype:0001726] <3>(23|30) (24|6|4)
- 1:   body proportion variant [WBPhenotype:0002338] <2>(0|0) (0|0|0)
- 1:   large [WBPhenotype:0000319] <1>(1|2) (2|1|0)
- 1:   scrawny [WBPhenotype:0000314](0|0) (0|0|0)
- 1:   squat [WBPhenotype:0000021](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Hedgehog/intein (Hint) domain0.00000001327Direct
SNF-like0.0000005937Direct
Lamin A/C globular tail domain0.000001923Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000002038Direct
Nicotinic receptor ligand binding domain-like0.00002242Direct
Intermediate filament protein, coiled coil region0.00003679Direct
Spectrin repeat0.00003679Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0001029Direct
SMAD MH1 domain0.0001029Direct
Nucleotide-binding domain0.0001029Direct
Growth factor receptor domain0.0001469Direct
PH domain-like0.0001562Direct
Transducin (heterotrimeric G protein), gamma chain0.0002014Direct
S-adenosylmethionine synthetase0.0002014Direct
Zn-binding ribosomal proteins0.0003186Direct
Tim10-like0.0008714Direct
Subtilisin-like0.0008714Direct
DBL homology domain (DH-domain)0.001705Inherited
PYP-like sensor domain (PAS domain)0.008376Inherited
Heme-dependent peroxidases0.009884Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.0134Inherited
Histone-fold0.02342Inherited
Protease propeptides/inhibitors0.02825Inherited
SMAD/FHA domain0.03036Inherited
Ankyrin repeat0.4211Inherited
Voltage-gated potassium channels0.4211Inherited
SNARE-like0.807Inherited
cAMP-binding domain-like0.807Inherited
Insulin-like0.8081Inherited
Troponin coil-coiled subunits0.8582Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.00000006198Direct
SNF-like0.000001304Direct
Laminin-type module0.00000473Direct
Pleckstrin-homology domain (PH domain)0.00003657Direct
D-aminoacid oxidase-like0.00004068Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000606Direct
Nicotinic receptor ligand binding domain-like0.00008099Direct
Intermediate filament protein, coiled coil region0.0001075Direct
PDI-like0.0002112Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0002112Direct
SMAD MH1 domain0.0002112Direct
Lamin A/C globular tail domain0.0002661Direct
Glycosyl transferases group 10.0003429Direct
Proprotein convertase P-domain0.0003429Direct
Transducin (heterotrimeric G protein), gamma chain0.0003429Direct
MIF4G domain-like0.0003429Direct
S-adenosylmethionine synthetase0.0003429Direct
Spectrin repeat0.0005854Direct
Clathrin adaptor core protein0.0006441Direct
Transforming growth factor (TGF)-beta0.001474Inherited
Tim10/DDP0.001474Inherited
Subtilases0.001474Inherited
SMAD domain0.001504Inherited
DBL homology domain (DH-domain)0.004409Inherited
Rhodopsin-like0.01799Inherited
Myeloperoxidase-like0.0187Inherited
Synaptotagmin-like (S variant)0.04504Inherited
G proteins0.09612Inherited
Nucleosome core histones0.1024Inherited
Ankyrin repeat0.4402Inherited
Voltage-gated potassium channels0.4675Inherited
Clathrin coat assembly domain0.8097Inherited
cAMP-binding domain0.8097Inherited
Insulin-like0.8264Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Hedgehog/intein (Hint) domain0.00000001058Direct
SNF-like0.0000004789Direct
Lamin A/C globular tail domain0.000001558Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000001652Direct
Nicotinic receptor ligand binding domain-like0.00001828Direct
Intermediate filament protein, coiled coil region0.00003005Direct
Spectrin repeat0.00003005Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00008434Direct
Nucleotide-binding domain0.00008434Direct
SMAD MH1 domain0.00008434Direct
Growth factor receptor domain0.0001205Direct
PH domain-like0.0001282Direct
S-adenosylmethionine synthetase0.0001654Direct
Transducin (heterotrimeric G protein), gamma chain0.0001654Direct
Zn-binding ribosomal proteins0.0002625Direct
Tim10-like0.000725Direct
Subtilisin-like0.000725Direct
DBL homology domain (DH-domain)0.001426Inherited
PYP-like sensor domain (PAS domain)0.007174Inherited
Heme-dependent peroxidases0.008497Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.01159Inherited
Histone-fold0.02044Inherited
Protease propeptides/inhibitors0.02478Inherited
SMAD/FHA domain0.02666Inherited
EGF/Laminin0.3747Inherited
Ankyrin repeat0.4002Inherited
Voltage-gated potassium channels0.4002Inherited
SNARE-like0.7888Inherited
cAMP-binding domain-like0.7888Inherited
Insulin-like0.7899Inherited
Troponin coil-coiled subunits0.8419Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.000001652Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001654Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0001654Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0001654Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0002295Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0002625Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.001208Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00008434Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001654Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0003996Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0004965Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0174Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.02478Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.6903Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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