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Worm Phenotype (WP): body size variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ 1:   organism segment morphology variant [WBPhenotype:0000582] <16>(58|58) (58|21|8)
+ 1:   adult body morphology variant [WBPhenotype:0000036] <16>(58|58) (58|21|8)
+ 1:   body region morphology variant [WBPhenotype:0000532] <16>(58|58) (58|21|8)
+ 1:   body morphology variant [WBPhenotype:0000072] <16>(58|58) (58|22|8)
+ 1:   organism morphology variant [WBPhenotype:0000535] <16>(323|433) (324|192|53)
+ 1:   developmental morphology variant [WBPhenotype:0000934] <16>(58|58) (58|21|8)
0:   body size variant [WBPhenotype:0000231] <6>(35|37) (35|11|6)
- 1:   body length variant [WBPhenotype:0001726] <3>(30|34) (30|10|5)
- 1:   body width variant [WBPhenotype:0001727] <3>(29|34) (29|8|6)
- 1:   body proportion variant [WBPhenotype:0002338] <2>(0|0) (0|0|0)
- 1:   large [WBPhenotype:0000319] <1>(1|2) (2|1|0)
- 1:   scrawny [WBPhenotype:0000314](0|0) (0|0|0)
- 1:   squat [WBPhenotype:0000021](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Insulin-like0.00000001176Direct
Hedgehog/intein (Hint) domain0.00000001922Direct
SNF-like0.000001919Direct
Lamin A/C globular tail domain0.000002655Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000002663Direct
Nicotinic receptor ligand binding domain-like0.0000254Direct
P-loop containing nucleoside triphosphate hydrolases0.00004229Direct
Spectrin repeat0.00004861Direct
Intermediate filament protein, coiled coil region0.00004861Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.000097Direct
SMAD MH1 domain0.0001271Direct
Nucleotide-binding domain0.0001271Direct
PH domain-like0.0001669Direct
Transducin (heterotrimeric G protein), gamma chain0.0001926Direct
Growth factor receptor domain0.0002077Direct
S-adenosylmethionine synthetase0.0002394Direct
Zn-binding ribosomal proteins0.0003003Direct
EGF/Laminin0.000489Direct
Homeodomain-like0.0005623Direct
Tim10-like0.001028Inherited
Subtilisin-like0.001028Inherited
Cytochrome b5-like heme/steroid binding domain0.005299Inherited
PYP-like sensor domain (PAS domain)0.009731Inherited
Troponin coil-coiled subunits0.009731Inherited
Translation proteins0.01172Inherited
Heme-dependent peroxidases0.01174Inherited
SNARE-like0.0131Inherited
cAMP-binding domain-like0.01638Inherited
Histone-fold0.02066Inherited
Voltage-gated potassium channels0.03214Inherited
Protease propeptides/inhibitors0.03239Inherited
SMAD/FHA domain0.03619Inherited
Ankyrin repeat0.04538Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
G proteins0.00000007674Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.00000009914Direct
Insulin-like0.0000001395Direct
SNF-like0.000002132Direct
Laminin-type module0.000006542Direct
Pleckstrin-homology domain (PH domain)0.00003331Direct
D-aminoacid oxidase-like0.00005343Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0001099Direct
Nicotinic receptor ligand binding domain-like0.0001245Direct
Intermediate filament protein, coiled coil region0.0001523Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0002068Direct
SMAD MH1 domain0.0002757Direct
PDI-like0.0002757Direct
Transducin (heterotrimeric G protein), gamma chain0.000339Direct
Lamin A/C globular tail domain0.0003604Direct
Glycosyl transferases group 10.0004284Direct
Proprotein convertase P-domain0.0004284Direct
S-adenosylmethionine synthetase0.0004284Direct
MIF4G domain-like0.0004284Direct
Clathrin adaptor core protein0.0006309Direct
Spectrin repeat0.0007862Direct
Clathrin coat assembly domain0.000833Direct
Subtilases0.001824Inherited
Tim10/DDP0.001824Inherited
Transforming growth factor (TGF)-beta0.001824Inherited
SMAD domain0.001934Inherited
cAMP-binding domain0.02325Inherited
Myeloperoxidase-like0.02325Inherited
Rhodopsin-like0.03005Inherited
Synaptotagmin-like (S variant)0.05481Inherited
Nucleosome core histones0.09787Inherited
Voltage-gated potassium channels0.1187Inherited
Ankyrin repeat0.157Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Insulin-like0.00000000931Direct
Hedgehog/intein (Hint) domain0.00000001524Direct
SNF-like0.000001544Direct
Lamin A/C globular tail domain0.000002138Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000002144Direct
Nicotinic receptor ligand binding domain-like0.0000206Direct
P-loop containing nucleoside triphosphate hydrolases0.00003437Direct
Spectrin repeat0.00003952Direct
Intermediate filament protein, coiled coil region0.00003952Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00007907Direct
SMAD MH1 domain0.0001037Direct
Nucleotide-binding domain0.0001037Direct
PH domain-like0.0001361Direct
Transducin (heterotrimeric G protein), gamma chain0.0001573Direct
Growth factor receptor domain0.0001696Direct
S-adenosylmethionine synthetase0.0001958Direct
Zn-binding ribosomal proteins0.0002461Direct
EGF/Laminin0.0004022Direct
Homeodomain-like0.0004625Direct
Subtilisin-like0.0008506Direct
Tim10-like0.0008506Direct
Cytochrome b5-like heme/steroid binding domain0.004478Inherited
PYP-like sensor domain (PAS domain)0.008302Inherited
Troponin coil-coiled subunits0.008302Inherited
Translation proteins0.01004Inherited
Heme-dependent peroxidases0.01006Inherited
SNARE-like0.01124Inherited
cAMP-binding domain-like0.0141Inherited
Histone-fold0.01789Inherited
Voltage-gated potassium channels0.02812Inherited
Protease propeptides/inhibitors0.02834Inherited
SMAD/FHA domain0.03173Inherited
Ankyrin repeat0.03995Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.000001166Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.000002144Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0001958Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001958Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0001958Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0002096Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0003206Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.001499Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.00711Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0001037Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001958Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0005004Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0005007Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0006704Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.02Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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