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Worm Phenotype (WP): amphid phasmid morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <5>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <4>(444|531) (445|238|67)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <8>(98|104) (100|46|17)
+ + + 3:   nervous system morphology variant [WBPhenotype:0000604] <7>(31|28) (32|11|3)
+ + 2:   sensillum morphology variant [WBPhenotype:0000299] <7>(20|16) (21|7|0)
+ 1:   amphid phasmid sensillum morphology variant [WBPhenotype:0001527] <2>(11|8) (13|6|0)
0:   amphid phasmid morphology variant [WBPhenotype:0000255] <2>(11|8) (13|6|0)
- 1:   amphid morphology variant [WBPhenotype:0000256] <2>(2|1) (2|1|0)
- 1:   phasmid morphology variant [WBPhenotype:0000257] <2>(2|3) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
P-loop containing nucleoside triphosphate hydrolases0.000000001785Direct
TPR-like0.000000122Direct
Homeodomain-like0.000002605Direct
Bromodomain0.000006302Direct
Glutathione synthetase ATP-binding domain-like0.00007436Direct
Protein kinase-like (PK-like)0.0001505Direct
BAR/IMD domain-like0.0002494Direct
PX domain0.0007142Direct
Bet v1-like0.0009926Direct
HMG-box0.002835Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
G proteins0.000000002467Direct
Motor proteins0.000000006775Direct
Bromodomain0.00001375Direct
Homeodomain0.00005925Direct
SMAD domain0.0001859Direct
Protein kinases, catalytic subunit0.0008564Direct
HMG-box0.004368Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
P-loop containing nucleoside triphosphate hydrolases0.000000001411Direct
TPR-like0.00000009727Direct
Homeodomain-like0.0000021Direct
Bromodomain0.000005089Direct
Glutathione synthetase ATP-binding domain-like0.00006049Direct
Protein kinase-like (PK-like)0.0001227Direct
BAR/IMD domain-like0.0002041Direct
PX domain0.0005894Direct
Bet v1-like0.0008216Direct
beta-beta-alpha zinc fingers0.0008283Direct
SMAD/FHA domain0.000861Direct
HMG-box0.002381Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.000005783Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.000168Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.0008216Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0009213Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03435Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)