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Worm Phenotype (WP): amphid phasmid morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <5>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <4>(437|528) (437|238|67)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <8>(95|104) (95|45|16)
+ + + 3:   nervous system morphology variant [WBPhenotype:0000604] <7>(31|28) (32|10|3)
+ + 2:   sensillum morphology variant [WBPhenotype:0000299] <7>(20|16) (20|6|0)
+ 1:   amphid phasmid sensillum morphology variant [WBPhenotype:0001527] <2>(12|8) (12|5|0)
0:   amphid phasmid morphology variant [WBPhenotype:0000255] <2>(12|8) (12|5|0)
- 1:   amphid morphology variant [WBPhenotype:0000256] <2>(1|0) (1|0|0)
- 1:   phasmid morphology variant [WBPhenotype:0000257] <2>(2|3) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
TPR-like0.00000005586Direct
Homeodomain-like0.000001396Direct
Bromodomain0.00000477Direct
Glutathione synthetase ATP-binding domain-like0.00005691Direct
Protein kinase-like (PK-like)0.0001501Direct
BAR/IMD domain-like0.0001549Direct
P-loop containing nucleoside triphosphate hydrolases0.0002588Direct
PX domain0.0005971Direct
beta-beta-alpha zinc fingers0.0006276Direct
SMAD/FHA domain0.0006792Direct
Bet v1-like0.0008314Direct
HMG-box0.002394Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Motor proteins0.000000003522Direct
Bromodomain0.000009886Direct
Homeodomain0.00003378Direct
SMAD domain0.0001489Direct
Protein kinases, catalytic subunit0.0007493Direct
Armadillo repeat0.0008908Direct
PX domain0.0008908Direct
HMG-box0.003567Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
TPR-like0.00000004446Direct
Homeodomain-like0.000001123Direct
Bromodomain0.000003853Direct
Glutathione synthetase ATP-binding domain-like0.0000463Direct
Protein kinase-like (PK-like)0.0001225Direct
BAR/IMD domain-like0.0001264Direct
P-loop containing nucleoside triphosphate hydrolases0.0002118Direct
PX domain0.0004921Direct
beta-beta-alpha zinc fingers0.0005176Direct
SMAD/FHA domain0.0005605Direct
Bet v1-like0.000687Direct
HMG-box0.002005Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.000004213Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.0001399Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.000687Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0006961Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.02882Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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