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Worm Phenotype (WP): amphid phasmid morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <5>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <4>(443|534) (444|238|67)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <8>(97|104) (99|46|16)
+ + + 3:   nervous system morphology variant [WBPhenotype:0000604] <7>(30|28) (33|11|3)
+ + 2:   sensillum morphology variant [WBPhenotype:0000299] <7>(18|16) (21|7|0)
+ 1:   amphid phasmid sensillum morphology variant [WBPhenotype:0001527] <2>(10|8) (13|6|0)
0:   amphid phasmid morphology variant [WBPhenotype:0000255] <2>(10|8) (13|6|0)
- 1:   amphid morphology variant [WBPhenotype:0000256] <2>(2|1) (2|1|0)
- 1:   phasmid morphology variant [WBPhenotype:0000257] <2>(2|3) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
P-loop containing nucleoside triphosphate hydrolases0.000000002062Direct
TPR-like0.0000001264Direct
Homeodomain-like0.000002702Direct
Bromodomain0.000006393Direct
Glutathione synthetase ATP-binding domain-like0.0000755Direct
Protein kinase-like (PK-like)0.0001584Direct
BAR/IMD domain-like0.0002536Direct
PX domain0.0007211Direct
HMG-box0.002864Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
G proteins0.000000002661Direct
Motor proteins0.000000007093Direct
Bromodomain0.00001408Direct
Homeodomain0.0000617Direct
SMAD domain0.0001889Direct
Protein kinases, catalytic subunit0.0009143Direct
HMG-box0.004444Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
P-loop containing nucleoside triphosphate hydrolases0.000000001635Direct
TPR-like0.000000101Direct
Homeodomain-like0.000002182Direct
Bromodomain0.000005174Direct
Glutathione synthetase ATP-binding domain-like0.0000615Direct
Protein kinase-like (PK-like)0.0001294Direct
BAR/IMD domain-like0.0002077Direct
PX domain0.0005958Direct
Bet v1-like0.000831Direct
beta-beta-alpha zinc fingers0.000849Direct
SMAD/FHA domain0.0008725Direct
HMG-box0.002407Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.000005892Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.0001701Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.000831Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0009378Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03474Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)