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Worm Phenotype (WP): no oocytes

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + 5:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <17>(119|124) (119|47|12)
+ + + 3:   gametogenesis variant [WBPhenotype:0000774] <2>(57|57) (58|22|4)
+ + 2:   germ cell development variant [WBPhenotype:0000812] <7>(54|57) (55|22|4)
+ + 2:   germ cell differentiation variant [WBPhenotype:0000894] <3>(38|40) (38|15|2)
+ 1:   no germ line [WBPhenotype:0000215] <2>(7|9) (7|3|1)
+ 1:   no differentiated gametes [WBPhenotype:0000395] <2>(7|9) (7|3|1)
0:   no oocytes [WBPhenotype:0000291](7|9) (7|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleic acid-binding proteins0.000000006241Direct
GroEL equatorial domain-like0.000003278Direct
GroEL-intermediate domain like0.000003278Direct
GroEL apical domain-like0.000006321Direct
Smc hinge domain0.00001624Direct
Sm-like ribonucleoproteins0.0001662Direct
"Winged helix" DNA-binding domain0.0003991Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.0000003445Direct
Smc hinge domain0.000009195Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.00005637Direct
Cold shock DNA-binding domain-like0.0001016Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.000113Direct
Group II chaperonin (CCT, TRIC), apical domain0.0001952Direct
Pumilio repeat0.000312Direct
Cyclin0.0003142Direct
Ubiquitin-related0.0004752Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleic acid-binding proteins0.000000004973Direct
GroEL-intermediate domain like0.000002661Direct
GroEL equatorial domain-like0.000002661Direct
GroEL apical domain-like0.000005139Direct
Smc hinge domain0.00001324Direct
Sm-like ribonucleoproteins0.0001364Direct
"Winged helix" DNA-binding domain0.0003294Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000002661Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.000002661Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0006671Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000002661Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)