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Worm Phenotype (WP): meiotic progression during oogenesis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <5>
+ + + + + 5:   development variant [WBPhenotype:0000518] <7>(511|586) (511|253|70)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <16>(125|123) (125|48|16)
+ + + 3:   gametogenesis variant [WBPhenotype:0000774] <2>(64|59) (64|26|6)
+ + 2:   germ cell development variant [WBPhenotype:0000812] <8>(62|59) (62|26|6)
+ + 2:   germ cell differentiation variant [WBPhenotype:0000894] <3>(35|39) (35|15|2)
+ 1:   oogenesis variant [WBPhenotype:0000186] <5>(31|33) (31|14|2)
0:   meiotic progression during oogenesis variant [WBPhenotype:0000313] <2>(26|28) (26|12|2)
- 1:   meiotic progression prophase variant [WBPhenotype:0001824] <4>(24|23) (24|11|2)
- 1:   oocyte meiotic maturation variant [WBPhenotype:0000105] <1>(1|2) (1|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Skp1 dimerisation domain-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL-intermediate domain like0.00000000008577Direct
GroEL equatorial domain-like0.00000000008577Direct
GroEL apical domain-like0.0000000004118Direct
Sm-like ribonucleoproteins0.00000001224Direct
Translation proteins SH3-like domain0.0000001767Direct
Nucleic acid-binding proteins0.000003917Direct
L30e-like0.00002109Direct
F1F0 ATP synthase subunit C0.00002581Direct
S15/NS1 RNA-binding domain0.00002581Direct
Ribosomal proteins S24e, L23 and L15e0.00002581Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00007042Direct
Translational machinery components0.00007291Direct
"Winged helix" DNA-binding domain0.0001402Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0005169Direct
Nucleotidylyl transferase0.006013Inherited
Histone-fold0.02701Inherited
POZ domain0.02963Inherited
CCCH zinc finger0.03169Inherited
Class II aaRS and biotin synthetases0.251Inherited
Translation proteins0.251Inherited
Ribosomal protein S5 domain 2-like0.3139Inherited
Protein kinase-like (PK-like)0.7962Inherited
SNARE-like0.817Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Skp1 dimerisation domain-like0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00000000004365Direct
Proteasome subunits0.00000000007312Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000000003737Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000001232Direct
RecA protein-like (ATPase-domain)0.000002625Direct
Anticodon-binding domain0.000009972Direct
Translational machinery components0.00002179Direct
Extended AAA-ATPase domain0.0000298Direct
F1F0 ATP synthase subunit C0.00004643Direct
L30e/L7ae ribosomal proteins0.00004643Direct
Cold shock DNA-binding domain-like0.000108Direct
Pumilio repeat0.0001529Direct
Elongation factors0.0002129Direct
Clathrin adaptor core protein0.0002866Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0009151Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.001442Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.001969Inherited
Nitrogenase iron protein-like0.00215Inherited
BTB/POZ domain0.03834Inherited
CCCH zinc finger0.053Inherited
Nucleosome core histones0.07829Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.2734Inherited
G proteins0.3094Inherited
Protein kinases, catalytic subunit0.8674Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL equatorial domain-like0.00000000006732Direct
GroEL-intermediate domain like0.00000000006732Direct
GroEL apical domain-like0.000000000324Direct
Sm-like ribonucleoproteins0.000000009687Direct
Translation proteins SH3-like domain0.0000001408Direct
Nucleic acid-binding proteins0.000003157Direct
L30e-like0.0000171Direct
S15/NS1 RNA-binding domain0.00002092Direct
Ribosomal proteins S24e, L23 and L15e0.00002092Direct
F1F0 ATP synthase subunit C0.00002092Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00005727Direct
Translational machinery components0.00005931Direct
"Winged helix" DNA-binding domain0.0001145Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0004253Direct
Nucleotidylyl transferase0.005088Inherited
Histone-fold0.02354Inherited
POZ domain0.02588Inherited
CCCH zinc finger0.0277Inherited
Class II aaRS and biotin synthetases0.2327Inherited
Translation proteins0.2327Inherited
Ribosomal protein S5 domain 2-like0.2943Inherited
Protein kinase-like (PK-like)0.7783Inherited
SNARE-like0.7997Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00000000006732Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000006732Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.000004466Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.00002092Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.00004655Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.0001311Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004253Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0004334Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.005593Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.03106Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000006732Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004253Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)