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Worm Phenotype (WP): meiotic progression during oogenesis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + + + + 5:   development variant [WBPhenotype:0000518] <6>(507|580) (507|247|68)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <17>(120|122) (121|48|12)
+ + + 3:   gametogenesis variant [WBPhenotype:0000774] <2>(58|56) (59|22|4)
+ + 2:   germ cell differentiation variant [WBPhenotype:0000894] <3>(38|40) (38|15|2)
+ + 2:   germ cell development variant [WBPhenotype:0000812] <8>(55|56) (56|22|4)
+ 1:   oogenesis variant [WBPhenotype:0000186] <5>(33|34) (33|14|2)
0:   meiotic progression during oogenesis variant [WBPhenotype:0000313] <2>(26|28) (26|12|2)
- 1:   meiotic progression prophase variant [WBPhenotype:0001824] <4>(24|23) (24|11|2)
- 1:   oocyte meiotic maturation variant [WBPhenotype:0000105] <1>(1|2) (1|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL equatorial domain-like0.0000000001019Direct
GroEL-intermediate domain like0.0000000001019Direct
GroEL apical domain-like0.0000000004891Direct
Sm-like ribonucleoproteins0.00000001482Direct
Translation proteins SH3-like domain0.0000002036Direct
Nucleic acid-binding proteins0.000004929Direct
L30e-like0.00002312Direct
Ribosomal proteins S24e, L23 and L15e0.00002762Direct
F1F0 ATP synthase subunit C0.00002762Direct
S15/NS1 RNA-binding domain0.00002762Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00007721Direct
Translational machinery components0.00007818Direct
"Winged helix" DNA-binding domain0.0001757Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0005539Direct
Nucleotidylyl transferase0.00556Inherited
Histone-fold0.03029Inherited
POZ domain0.03032Inherited
CCCH zinc finger0.03377Inherited
Class II aaRS and biotin synthetases0.2523Inherited
Translation proteins0.2523Inherited
Ribosomal protein S5 domain 2-like0.3156Inherited
SNARE-like0.8114Inherited
Protein kinase-like (PK-like)0.8123Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Skp1 dimerisation domain-like0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00000000004717Direct
Proteasome subunits0.00000000008105Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000000004039Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000001307Direct
RecA protein-like (ATPase-domain)0.00000272Direct
Anticodon-binding domain0.00001018Direct
Translational machinery components0.00002254Direct
Extended AAA-ATPase domain0.00002589Direct
L30e/L7ae ribosomal proteins0.00004744Direct
F1F0 ATP synthase subunit C0.00004744Direct
Pumilio repeat0.0000909Direct
Cold shock DNA-binding domain-like0.0001139Direct
Elongation factors0.0002219Direct
Clathrin adaptor core protein0.0002926Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.000937Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.001475Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.002035Inherited
Nitrogenase iron protein-like0.002197Inherited
BTB/POZ domain0.03807Inherited
CCCH zinc finger0.05427Inherited
Nucleosome core histones0.08151Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.271Inherited
G proteins0.3072Inherited
Protein kinases, catalytic subunit0.8667Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Skp1 dimerisation domain-like0Direct
GroEL equatorial domain-like0.00000000008097Direct
GroEL-intermediate domain like0.00000000008097Direct
GroEL apical domain-like0.0000000003892Direct
Sm-like ribonucleoproteins0.00000001186Direct
Translation proteins SH3-like domain0.0000001641Direct
Nucleic acid-binding proteins0.000004018Direct
L30e-like0.00001892Direct
F1F0 ATP synthase subunit C0.00002261Direct
Ribosomal proteins S24e, L23 and L15e0.00002261Direct
S15/NS1 RNA-binding domain0.00002261Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00006334Direct
Translational machinery components0.00006414Direct
"Winged helix" DNA-binding domain0.0001447Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0004597Direct
Nucleotidylyl transferase0.004736Inherited
Histone-fold0.02661Inherited
POZ domain0.02664Inherited
CCCH zinc finger0.02973Inherited
Class II aaRS and biotin synthetases0.2346Inherited
Translation proteins0.2346Inherited
Ribosomal protein S5 domain 2-like0.2961Inherited
SNARE-like0.793Inherited
Protein kinase-like (PK-like)0.7941Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00000000008097Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000008097Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.000004824Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.00002261Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.00005258Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.0001418Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004597Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0004779Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.006029Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.03727Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000008097Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004597Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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