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Worm Phenotype (WP): avoids bacterial lawn

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   behavior variant [WBPhenotype:0000517] <2>(114|114) (114|47|18)
+ + 2:   organism behavior variant [WBPhenotype:0000525] <20>(114|114) (114|47|18)
+ 1:   feeding behavior variant [WBPhenotype:0000659] <9>(37|34) (37|12|4)
0:   avoids bacterial lawn [WBPhenotype:0000402](24|18) (24|10|4)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold0Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000001365Direct
Translation proteins SH3-like domain0.000000002596Direct
GroEL-intermediate domain like0.000000005997Direct
GroEL equatorial domain-like0.000000005997Direct
Sm-like ribonucleoproteins0.00000000722Direct
GroEL apical domain-like0.00000001919Direct
Class II aaRS and biotin synthetases0.00000002322Direct
Nucleotidylyl transferase0.00000003212Direct
Zn-binding ribosomal proteins0.00000003553Direct
S15/NS1 RNA-binding domain0.0000001541Direct
Class II aaRS ABD-related0.000007381Direct
Actin-like ATPase domain0.000009307Direct
F1F0 ATP synthase subunit C0.00002036Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00005291Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00005771Direct
Lipovitellin-phosvitin complex, superhelical domain0.00005771Direct
Tubulin nucleotide-binding domain-like0.0004011Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004127Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0004127Direct
L30e-like0.0004127Direct
Nucleic acid-binding proteins0.0004822Direct
Tubulin C-terminal domain-like0.0005442Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0006538Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
a tRNA synthase domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
Nucleosome core histones3.234e-16Direct
Proteasome subunits0.000000000000005805Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.00000003237Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.00000003237Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000003421Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000000735Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000009738Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.000007361Direct
Actin/HSP700.000008547Direct
F1F0 ATP synthase subunit C0.00003442Direct
L30e/L7ae ribosomal proteins0.00003442Direct
RecA protein-like (ATPase-domain)0.00009731Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00009731Direct
Lipovitellin-phosvitin complex, superhelical domain0.00009731Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004047Direct
Tubulin, GTPase domain0.000789Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold0Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000001073Direct
Translation proteins SH3-like domain0.00000000205Direct
GroEL equatorial domain-like0.000000004744Direct
GroEL-intermediate domain like0.000000004744Direct
Sm-like ribonucleoproteins0.000000005714Direct
GroEL apical domain-like0.00000001521Direct
Class II aaRS and biotin synthetases0.00000001842Direct
Nucleotidylyl transferase0.00000002549Direct
Zn-binding ribosomal proteins0.00000002821Direct
S15/NS1 RNA-binding domain0.0000001228Direct
Class II aaRS ABD-related0.000005958Direct
Actin-like ATPase domain0.000007519Direct
F1F0 ATP synthase subunit C0.0000165Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00004302Direct
Lipovitellin-phosvitin complex, superhelical domain0.00004692Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00004692Direct
Tubulin nucleotide-binding domain-like0.0003293Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0003389Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003389Direct
L30e-like0.0003389Direct
Nucleic acid-binding proteins0.0003965Direct
Tubulin C-terminal domain-like0.0004475Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0005388Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.000000004744Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000004744Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.000002024Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.000003516Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.000003516Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00004692Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0.00004692Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001978Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0003293Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003389Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000004744Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00004692Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001978Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003389Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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