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Worm Phenotype (WP): avoids bacterial lawn

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + + 3:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + 2:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ + 2:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ 1:   response to bacteria variant [WBPhenotype:0002545] <6>(28|22) (28|12|4)
+ 1:   feeding behavior variant [WBPhenotype:0000659] <9>(34|33) (36|13|4)
0:   avoids bacterial lawn [WBPhenotype:0000402](24|19) (24|11|4)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold8.972e-16Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000002293Direct
Class II aaRS and biotin synthetases0.000000001385Direct
Translation proteins SH3-like domain0.000000003678Direct
GroEL-intermediate domain like0.00000000812Direct
GroEL equatorial domain-like0.00000000812Direct
Sm-like ribonucleoproteins0.00000001064Direct
GroEL apical domain-like0.00000002599Direct
Nucleotidylyl transferase0.00000003202Direct
Zn-binding ribosomal proteins0.00000004594Direct
S15/NS1 RNA-binding domain0.0000001902Direct
Class II aaRS ABD-related0.000009031Direct
Actin-like ATPase domain0.00001324Direct
F1F0 ATP synthase subunit C0.0000239Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00006461Direct
Lipovitellin-phosvitin complex, superhelical domain0.00006765Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00006765Direct
Nucleic acid-binding proteins0.0001283Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004813Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0004813Direct
L30e-like0.0004813Direct
Tubulin nucleotide-binding domain-like0.0004853Direct
Tubulin C-terminal domain-like0.0006586Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.000763Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
a tRNA synthase domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
Nucleosome core histones9.394e-16Direct
Proteasome subunits0.000000000000009374Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.0000000019Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.00000004633Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000004325Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.0000009657Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000123Direct
Anticodon-binding domain0.000008527Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.000008527Direct
Actin/HSP700.00001151Direct
L30e/L7ae ribosomal proteins0.00003983Direct
F1F0 ATP synthase subunit C0.00003983Direct
Lipovitellin-phosvitin complex, superhelical domain0.0001123Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.0001123Direct
RecA protein-like (ATPase-domain)0.0001123Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004654Direct
Tubulin, GTPase domain0.0009376Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold7.031e-16Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000001817Direct
Class II aaRS and biotin synthetases0.0000000011Direct
Translation proteins SH3-like domain0.000000002928Direct
GroEL equatorial domain-like0.000000006473Direct
GroEL-intermediate domain like0.000000006473Direct
Sm-like ribonucleoproteins0.000000008488Direct
GroEL apical domain-like0.00000002076Direct
Nucleotidylyl transferase0.00000002559Direct
Zn-binding ribosomal proteins0.00000003676Direct
S15/NS1 RNA-binding domain0.0000001527Direct
Class II aaRS ABD-related0.000007346Direct
Actin-like ATPase domain0.00001078Direct
F1F0 ATP synthase subunit C0.0000195Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00005285Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00005533Direct
Lipovitellin-phosvitin complex, superhelical domain0.00005533Direct
Nucleic acid-binding proteins0.0001052Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0003982Direct
L30e-like0.0003982Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003982Direct
Tubulin nucleotide-binding domain-like0.0004016Direct
Tubulin C-terminal domain-like0.000546Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.000634Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.000000006473Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000006473Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.000002931Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.00000416Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.00000416Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.0000195Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0.00005533Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00005533Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0002322Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003982Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0004016Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000006473Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00005533Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0002322Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003982Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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