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Worm Phenotype (WP): avoids bacterial lawn

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   behavior variant [WBPhenotype:0000517] <2>(133|132) (134|53|20)
+ + 2:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (134|53|20)
+ 1:   feeding behavior variant [WBPhenotype:0000659] <9>(34|32) (36|12|4)
0:   avoids bacterial lawn [WBPhenotype:0000402](24|18) (24|10|4)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold4.465e-16Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000001639Direct
Translation proteins SH3-like domain0.000000002914Direct
GroEL equatorial domain-like0.000000006617Direct
GroEL-intermediate domain like0.000000006617Direct
Sm-like ribonucleoproteins0.000000008239Direct
GroEL apical domain-like0.00000002116Direct
Nucleotidylyl transferase0.00000002421Direct
Class II aaRS and biotin synthetases0.00000002646Direct
Zn-binding ribosomal proteins0.00000003847Direct
S15/NS1 RNA-binding domain0.000000164Direct
Class II aaRS ABD-related0.000007839Direct
Actin-like ATPase domain0.0000105Direct
F1F0 ATP synthase subunit C0.00002132Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00005619Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00006029Direct
Lipovitellin-phosvitin complex, superhelical domain0.00006029Direct
Tubulin nucleotide-binding domain-like0.0004263Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004322Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0004322Direct
L30e-like0.0004322Direct
Nucleic acid-binding proteins0.0005393Direct
Tubulin C-terminal domain-like0.0005787Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0006848Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
a tRNA synthase domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
Nucleosome core histones6.282e-16Direct
Proteasome subunits0.000000000000006269Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.00000003486Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.00000003486Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000003572Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.0000007753Direct
Group II chaperonin (CCT, TRIC), apical domain0.000001017Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.000007518Direct
Actin/HSP700.000009074Direct
L30e/L7ae ribosomal proteins0.00003515Direct
F1F0 ATP synthase subunit C0.00003515Direct
Lipovitellin-phosvitin complex, superhelical domain0.00009915Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00009915Direct
RecA protein-like (ATPase-domain)0.00009915Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004124Direct
Tubulin, GTPase domain0.000813Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold3.522e-16Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000001308Direct
Translation proteins SH3-like domain0.000000002336Direct
GroEL-intermediate domain like0.00000000531Direct
GroEL equatorial domain-like0.00000000531Direct
Sm-like ribonucleoproteins0.000000006615Direct
GroEL apical domain-like0.00000001703Direct
Nucleotidylyl transferase0.00000001949Direct
Class II aaRS and biotin synthetases0.0000000213Direct
Zn-binding ribosomal proteins0.000000031Direct
S15/NS1 RNA-binding domain0.0000001325Direct
Class II aaRS ABD-related0.000006411Direct
Actin-like ATPase domain0.000008597Direct
F1F0 ATP synthase subunit C0.00001749Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00004631Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00004969Direct
Lipovitellin-phosvitin complex, superhelical domain0.00004969Direct
Tubulin nucleotide-binding domain-like0.0003541Direct
L30e-like0.0003589Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0003589Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003589Direct
Nucleic acid-binding proteins0.0004488Direct
Tubulin C-terminal domain-like0.0004821Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0005719Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000531Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00000000531Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.000002321Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.00000372Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.00000372Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0.00004969Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00004969Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0002095Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0003541Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003589Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000531Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00004969Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0002095Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003589Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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