SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): egg retention

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|69)
+ + + + 4:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + + 3:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ + 2:   egg laying variant [WBPhenotype:0000640] <8>(18|18) (20|4|1)
+ 1:   egg laying defective [WBPhenotype:0000006] <4>(5|6) (6|1|1)
0:   egg retention [WBPhenotype:0000545] <2>(3|1) (4|0|0)
- 1:   bloated [WBPhenotype:0000862] <2>(2|1) (3|0|0)
- 1:   late stage egg laid [WBPhenotype:0001483](1|0) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain-like0.006225Inherited
Voltage-gated potassium channels0.2925Inherited
Protein kinase-like (PK-like)0.3643Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain0.005551Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
cAMP-binding domain-like0.005303Inherited
Voltage-gated potassium channels0.2737Inherited
Protein kinase-like (PK-like)0.3439Inherited
Homeodomain-like0.4423Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)