SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): muscle dystrophy

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   physiology variant [WBPhenotype:0000519] <7>(494|573) (495|248|68)
+ + 2:   organ system physiology variant [WBPhenotype:0000575] <8>(446|531) (446|235|67)
+ 1:   muscle system physiology variant [WBPhenotype:0000611] <3>(5|4) (5|0|0)
0:   muscle dystrophy [WBPhenotype:0000548] <2>(5|4) (5|0|0)
- 1:   body muscle dystrophy [WBPhenotype:0000550](5|4) (5|0|0)
- 1:   head muscle dystrophy [WBPhenotype:0000549](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.0000000000002601Direct
Ubiquitin-like0.0000001424Direct
Protein kinase-like (PK-like)0.0000664Direct
"Winged helix" DNA-binding domain0.0002623Direct
PDZ domain-like0.3628Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.0000000000007269Direct
DEP domain0.000000001169Direct
Protein kinases, catalytic subunit0.000106Direct
PDZ domain0.3861Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Frizzled cysteine-rich domain0.0000000000002026Direct
Ubiquitin-like0.0000001134Direct
Protein kinase-like (PK-like)0.00005401Direct
"Winged helix" DNA-binding domain0.0002147Direct
PDZ domain-like0.3421Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)