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Worm Phenotype (WP): organism segment morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Variant [WBPhenotype:0000886] <5>
+ 1:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
0:   organism segment morphology variant [WBPhenotype:0000582] <16>(58|58) (58|21|8)
- 1:   dauer body morphology variant [WBPhenotype:0001545] <8>(0|0) (0|0|0)
- 1:   tail morphology variant [WBPhenotype:0000073] <8>(13|12) (13|3|0)
- 1:   body size variant [WBPhenotype:0000231] <6>(35|37) (35|11|6)
- 1:   head morphology variant [WBPhenotype:0000071] <6>(2|1) (2|0|0)
- 1:   egg morphology variant [WBPhenotype:0000037] <4>(3|3) (3|3|0)
- 1:   body axis morphology variant [WBPhenotype:0000581] <2>(3|3) (3|1|0)
- 1:   sexually dimorphic morphology variant [WBPhenotype:0001023] <2>(13|13) (13|4|1)
- 1:   body constriction [WBPhenotype:0000212] <1>(0|0) (0|0|0)
- 1:   body vacuole [WBPhenotype:0001395] <1>(3|3) (3|0|0)
- 1:   larval body morphology variant [WBPhenotype:0000035] <1>(1|1) (1|0|0)
- 1:   body protrusions [WBPhenotype:0000453](0|0) (0|0|0)
- 1:   body twisted [WBPhenotype:0001295](0|0) (0|0|0)
- 1:   lumpy [WBPhenotype:0000406](0|0) (0|0|0)
- 1:   maternal effect morphology variant [WBPhenotype:0002458](0|0) (0|0|0)
- 1:   organism morphology variable [WBPhenotype:0000409](1|1) (1|0|0)
- 1:   pseudocoelom morphology variant [WBPhenotype:0000949](2|0) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Homeodomain-like0.0000000001355Direct
DBL homology domain (DH-domain)0.00000001226Direct
Hedgehog/intein (Hint) domain0.000000124Direct
Insulin-like0.0000002598Direct
Sema domain0.000008298Direct
ARM repeat0.00001086Direct
PH domain-like0.00001212Direct
Lamin A/C globular tail domain0.00001303Direct
SNF-like0.00001306Direct
P-loop containing nucleoside triphosphate hydrolases0.00003002Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00003037Direct
Growth factor receptor domain0.00003785Direct
Spectrin repeat0.0001876Direct
Intermediate filament protein, coiled coil region0.0001876Direct
EGF/Laminin0.000225Direct
Nicotinic receptor ligand binding domain-like0.000292Direct
Plexin repeat0.0003437Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0003437Direct
SMAD MH1 domain0.0003437Direct
Nucleotide-binding domain0.0003437Direct
LuxS/MPP-like metallohydrolase0.0003916Direct
Arginase/deacetylase0.000444Direct
Transducin (heterotrimeric G protein), gamma chain0.0005367Direct
S-adenosylmethionine synthetase0.0005367Direct
Fibronectin type III0.0006604Direct
Zn-binding ribosomal proteins0.0009155Direct
Immunoglobulin0.000984Direct
SNARE-like0.001289Inherited
lambda repressor-like DNA-binding domains0.001836Inherited
beta-beta-alpha zinc fingers0.002229Inherited
Tim10-like0.002241Inherited
Frizzled cysteine-rich domain0.002241Inherited
Subtilisin-like0.002241Inherited
Troponin coil-coiled subunits0.002352Inherited
Multidrug resistance efflux transporter EmrE0.00327Inherited
Heme-dependent peroxidases0.005162Inherited
cAMP-binding domain-like0.007885Inherited
Cytochrome b5-like heme/steroid binding domain0.01258Inherited
PYP-like sensor domain (PAS domain)0.01967Inherited
Cysteine-rich domain0.02398Inherited
TPR-like0.02506Inherited
RNA-binding domain, RBD0.03184Inherited
Ankyrin repeat0.03395Inherited
FYVE/PHD zinc finger0.03504Inherited
Translation proteins0.04281Inherited
Protease propeptides/inhibitors0.06161Inherited
Cysteine-rich DNA binding domain, (DM domain)0.06161Inherited
Voltage-gated potassium channels0.07927Inherited
SMAD/FHA domain0.08321Inherited
Histone-fold0.1155Inherited
Protein kinase-like (PK-like)0.2467Inherited
POZ domain0.4018Inherited
Thioredoxin-like0.8826Inherited
GST C-terminal domain-like1Inherited
C-type lectin-like1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
D-aminoacid oxidase, N-terminal domain0Direct
Skp1 dimerisation domain-like0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Sema domain0Direct
MIF4G domain-like0Direct
Transducin (alpha subunit), insertion domain0.000000000000006447Direct
Homeodomain0.0000000003275Direct
DBL homology domain (DH-domain)0.0000001198Direct
G proteins0.0000002987Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.0000005827Direct
Pleckstrin-homology domain (PH domain)0.000001106Direct
Insulin-like0.000002757Direct
SNF-like0.00001356Direct
Laminin-type module0.00002144Direct
I set domains0.00003134Direct
Clathrin coat assembly domain0.000126Direct
D-aminoacid oxidase-like0.000143Direct
Histone deacetylase, HDAC0.0004239Direct
Intermediate filament protein, coiled coil region0.0005397Direct
SMAD MH1 domain0.0007115Direct
Plexin repeat0.0007115Direct
PDI-like0.0007115Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0007115Direct
BTB/POZ domain0.0007159Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0008082Direct
Troponin I0.000929Direct
Glycosyl transferases group 10.000929Direct
Transducin (heterotrimeric G protein), gamma chain0.000929Direct
Proprotein convertase P-domain0.000929Direct
S-adenosylmethionine synthetase0.000929Direct
Growth factor receptor domain0.0009677Direct
Nicotinic receptor ligand binding domain-like0.00104Inherited
Lamin A/C globular tail domain0.001071Inherited
MPP-like0.001096Inherited
Clathrin adaptor core protein0.002091Inherited
Spectrin repeat0.002281Inherited
Subtilases0.00386Inherited
Frizzled cysteine-rich domain0.00386Inherited
Tim10/DDP0.00386Inherited
Transforming growth factor (TGF)-beta0.00386Inherited
SMAD domain0.004728Inherited
Forkhead DNA-binding domain0.007511Inherited
CUT domain0.009715Inherited
cAMP-binding domain0.01158Inherited
Myeloperoxidase-like0.01158Inherited
Classic zinc finger, C2H20.0118Inherited
Canonical RBD0.08596Inherited
Cysteine-rich DNA binding domain, (DM domain)0.09885Inherited
Pumilio repeat0.09885Inherited
Synaptotagmin-like (S variant)0.1091Inherited
Ankyrin repeat0.1371Inherited
Tetratricopeptide repeat (TPR)0.1544Inherited
Voltage-gated potassium channels0.233Inherited
Rhodopsin-like0.2482Inherited
Nucleosome core histones0.3291Inherited
Protein kinases, catalytic subunit0.6075Inherited
C-type lectin domain1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Homeodomain-like0.0000000001065Direct
DBL homology domain (DH-domain)0.000000009702Direct
Hedgehog/intein (Hint) domain0.00000009872Direct
Insulin-like0.0000002074Direct
Sema domain0.000006702Direct
ARM repeat0.000008777Direct
PH domain-like0.000009797Direct
Lamin A/C globular tail domain0.00001054Direct
SNF-like0.00001056Direct
P-loop containing nucleoside triphosphate hydrolases0.00002435Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00002464Direct
Growth factor receptor domain0.00003073Direct
Spectrin repeat0.0001532Direct
Intermediate filament protein, coiled coil region0.0001532Direct
EGF/Laminin0.0001839Direct
Nicotinic receptor ligand binding domain-like0.0002393Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0002817Direct
Plexin repeat0.0002817Direct
SMAD MH1 domain0.0002817Direct
Nucleotide-binding domain0.0002817Direct
LuxS/MPP-like metallohydrolase0.0003212Direct
Arginase/deacetylase0.0003647Direct
Transducin (heterotrimeric G protein), gamma chain0.0004415Direct
S-adenosylmethionine synthetase0.0004415Direct
Fibronectin type III0.0005444Direct
Zn-binding ribosomal proteins0.0007569Direct
Immunoglobulin0.0008137Direct
SNARE-like0.001069Inherited
lambda repressor-like DNA-binding domains0.001528Inherited
beta-beta-alpha zinc fingers0.001862Inherited
Subtilisin-like0.001873Inherited
Frizzled cysteine-rich domain0.001873Inherited
Tim10-like0.001873Inherited
Troponin coil-coiled subunits0.001966Inherited
Multidrug resistance efflux transporter EmrE0.002749Inherited
Heme-dependent peroxidases0.00436Inherited
cAMP-binding domain-like0.006703Inherited
Cytochrome b5-like heme/steroid binding domain0.01078Inherited
PYP-like sensor domain (PAS domain)0.01701Inherited
Cysteine-rich domain0.02084Inherited
TPR-like0.0218Inherited
RNA-binding domain, RBD0.02784Inherited
Ankyrin repeat0.02973Inherited
FYVE/PHD zinc finger0.0307Inherited
Translation proteins0.03763Inherited
Cysteine-rich DNA binding domain, (DM domain)0.05469Inherited
Protease propeptides/inhibitors0.05469Inherited
Voltage-gated potassium channels0.07086Inherited
SMAD/FHA domain0.0745Inherited
Histone-fold0.1045Inherited
Protein kinase-like (PK-like)0.2286Inherited
POZ domain0.3806Inherited
Thioredoxin-like0.8676Inherited
C-type lectin-like1Inherited
GST C-terminal domain-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.00000000934Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0000002194Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00002464Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.0003212Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0004275Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0004415Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0004415Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0004415Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0004415Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0007092Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.0007951Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0008497Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.001069Inherited
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.00436Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.005284Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.01883Inherited
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001197Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0002438Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0002817Direct
    48452,48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.0004415Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0004415Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0007951Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.001528Inherited
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.1318Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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