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Worm Phenotype (WP): organism segment morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ 1:   organism morphology variant [WBPhenotype:0000535] <7>(321|428) (322|184|49)
0:   organism segment morphology variant [WBPhenotype:0000582] <3>(44|48) (45|15|7)
- 1:   body morphology variant [WBPhenotype:0000072] <9>(35|42) (36|11|7)
- 1:   tail morphology variant [WBPhenotype:0000073] <8>(11|8) (11|2|0)
- 1:   head morphology variant [WBPhenotype:0000071] <7>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Skp1 dimerisation domain-like0Direct
Homeodomain-like0.0000000001677Direct
DBL homology domain (DH-domain)0.0000000005126Direct
Insulin-like0.0000000009962Direct
Hedgehog/intein (Hint) domain0.0000001139Direct
Immunoglobulin0.0000005249Direct
PH domain-like0.000004652Direct
SNF-like0.000005599Direct
Lamin A/C globular tail domain0.00001206Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000263Direct
P-loop containing nucleoside triphosphate hydrolases0.00003502Direct
Intermediate filament protein, coiled coil region0.0001754Direct
Spectrin repeat0.0001754Direct
Growth factor receptor domain0.0002054Direct
Nicotinic receptor ligand binding domain-like0.0002278Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.000243Direct
Nucleotide-binding domain0.0003254Direct
SMAD MH1 domain0.0003254Direct
Transducin (heterotrimeric G protein), gamma chain0.0004038Direct
S-adenosylmethionine synthetase0.000511Direct
Zn-binding ribosomal proteins0.0007344Direct
cAMP-binding domain-like0.001215Inherited
Tim10-like0.002142Inherited
Subtilisin-like0.002142Inherited
Multidrug resistance efflux transporter EmrE0.002171Inherited
Troponin coil-coiled subunits0.002236Inherited
SNARE-like0.005551Inherited
lambda repressor-like DNA-binding domains0.01204Inherited
PYP-like sensor domain (PAS domain)0.0189Inherited
Cysteine-rich domain0.02273Inherited
Heme-dependent peroxidases0.02563Inherited
Ankyrin repeat0.0272Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.02966Inherited
Voltage-gated potassium channels0.04084Inherited
Protease propeptides/inhibitors0.05959Inherited
Cysteine-rich DNA binding domain, (DM domain)0.05959Inherited
FYVE/PHD zinc finger0.07131Inherited
SMAD/FHA domain0.08029Inherited
Histone-fold0.08666Inherited
POZ domain0.3094Inherited
Protein kinase-like (PK-like)0.3456Inherited
C-type lectin-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
MIF4G domain-like0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0.000000000000005004Direct
Homeodomain0.0000000003189Direct
DBL homology domain (DH-domain)0.000000006024Direct
Insulin-like0.00000001482Direct
G proteins0.0000001233Direct
Pleckstrin-homology domain (PH domain)0.0000003356Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.000000514Direct
SNF-like0.00001191Direct
Laminin-type module0.0000195Direct
Clathrin coat assembly domain0.0001148Direct
D-aminoacid oxidase-like0.0001314Direct
I set domains0.0001978Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0004824Direct
Intermediate filament protein, coiled coil region0.0004896Direct
BTB/POZ domain0.0005081Direct
PDI-like0.0006569Direct
SMAD MH1 domain0.0006569Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0006706Direct
Transducin (heterotrimeric G protein), gamma chain0.0006731Direct
Nicotinic receptor ligand binding domain-like0.0008333Direct
Proprotein convertase P-domain0.0008675Direct
Troponin I0.0008675Direct
Glycosyl transferases group 10.0008675Direct
S-adenosylmethionine synthetase0.0008675Direct
Growth factor receptor domain0.0008765Direct
Lamin A/C globular tail domain0.0009845Direct
Clathrin adaptor core protein0.001435Inherited
cAMP-binding domain0.001854Inherited
Spectrin repeat0.002097Inherited
Tim10/DDP0.003612Inherited
Subtilases0.003612Inherited
Transforming growth factor (TGF)-beta0.003612Inherited
SMAD domain0.004391Inherited
CUT domain0.009129Inherited
Myeloperoxidase-like0.04702Inherited
Cysteine-rich DNA binding domain, (DM domain)0.09412Inherited
Synaptotagmin-like (S variant)0.1034Inherited
Ankyrin repeat0.1051Inherited
Voltage-gated potassium channels0.1341Inherited
Rhodopsin-like0.1717Inherited
Nucleosome core histones0.2552Inherited
Protein kinases, catalytic subunit0.7205Inherited
C-type lectin domain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Skp1 dimerisation domain-like0Direct
Homeodomain-like0.0000000001328Direct
DBL homology domain (DH-domain)0.0000000004065Direct
Insulin-like0.000000000791Direct
Hedgehog/intein (Hint) domain0.00000009124Direct
Immunoglobulin0.000000423Direct
PH domain-like0.000003781Direct
SNF-like0.000004553Direct
Lamin A/C globular tail domain0.000009818Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00002147Direct
P-loop containing nucleoside triphosphate hydrolases0.0000286Direct
Intermediate filament protein, coiled coil region0.000144Direct
Spectrin repeat0.000144Direct
Growth factor receptor domain0.0001687Direct
Nicotinic receptor ligand binding domain-like0.0001872Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0001998Direct
SMAD MH1 domain0.0002681Direct
Nucleotide-binding domain0.0002681Direct
Transducin (heterotrimeric G protein), gamma chain0.0003333Direct
S-adenosylmethionine synthetase0.000423Direct
Zn-binding ribosomal proteins0.00061Direct
cAMP-binding domain-like0.001012Inherited
EGF/Laminin0.001419Inherited
Tim10-like0.001798Inherited
Subtilisin-like0.001798Inherited
Multidrug resistance efflux transporter EmrE0.001823Inherited
Troponin coil-coiled subunits0.001879Inherited
SNARE-like0.004722Inherited
lambda repressor-like DNA-binding domains0.01038Inherited
PYP-like sensor domain (PAS domain)0.01643Inherited
Cysteine-rich domain0.01983Inherited
Heme-dependent peroxidases0.02243Inherited
Ankyrin repeat0.02383Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.02603Inherited
Voltage-gated potassium channels0.03602Inherited
Protease propeptides/inhibitors0.05304Inherited
Cysteine-rich DNA binding domain, (DM domain)0.05304Inherited
FYVE/PHD zinc finger0.06375Inherited
SMAD/FHA domain0.07203Inherited
Histone-fold0.0779Inherited
POZ domain0.2901Inherited
Protein kinase-like (PK-like)0.3255Inherited
C-type lectin-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.000000008511Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.00000456Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00001814Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00002147Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.000423Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.000423Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.000423Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0006682Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0006974Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.000812Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.00416Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.006454Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001101Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0002278Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0002681Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.000423Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0007558Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.001454Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.05304Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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