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Worm Phenotype (WP): nervous system morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ 1:   organ system morphology variant [WBPhenotype:0000534] <8>(98|104) (100|47|16)
0:   nervous system morphology variant [WBPhenotype:0000604] <8>(29|26) (30|10|3)
- 1:   sensillum morphology variant [WBPhenotype:0000299] <10>(17|13) (17|6|0)
- 1:   neuron morphology variant [WBPhenotype:0000905] <5>(13|9) (14|5|2)
- 1:   accessory cell morphology variant [WBPhenotype:0000969] <2>(0|0) (0|0|0)
- 1:   synapse morphology variant [WBPhenotype:0000616] <2>(4|4) (4|3|1)
- 1:   male nervous system morphology variant [WBPhenotype:0001358] <1>(6|6) (6|1|0)
- 1:   neuron number variant [WBPhenotype:0001312](0|0) (0|0|0)
- 1:   neuron positioning variant [WBPhenotype:0001310](0|0) (0|0|0)
- 1:   synapse density variant [WBPhenotype:0002001](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0.0000002029Direct
SMAD MH1 domain0.0000002029Direct
Arginase/deacetylase0.0000003981Direct
Transducin (alpha subunit), insertion domain0.000001096Direct
GTPase activation domain, GAP0.00001096Direct
Homeodomain-like0.00001897Direct
Immunoglobulin0.00005761Direct
SMAD/FHA domain0.00005983Direct
Fibronectin type III0.002521Inherited
BAR/IMD domain-like0.003862Inherited
Concanavalin A-like lectins/glucanases0.01028Inherited
PX domain0.02831Inherited
Frizzled cysteine-rich domain0.02831Inherited
PDZ domain-like0.03341Inherited
Plexin repeat0.03966Inherited
Bet v1-like0.03966Inherited
Tubulin nucleotide-binding domain-like0.04195Inherited
Bromodomain0.04345Inherited
Tubulin C-terminal domain-like0.07251Inherited
Glutathione synthetase ATP-binding domain-like0.07943Inherited
HMG-box0.08594Inherited
TPR-like0.103Inherited
EGF/Laminin0.1487Inherited
Cysteine-rich domain0.1873Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.1942Inherited
SNARE-like0.2468Inherited
PH domain-like0.2958Inherited
P-loop containing nucleoside triphosphate hydrolases0.3091Inherited
C-type lectin-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0Direct
Histone deacetylase, HDAC0.0000002765Direct
SMAD domain0.0000002765Direct
SMAD MH1 domain0.0000004881Direct
Transducin (alpha subunit), insertion domain0.000001064Direct
Motor proteins0.00000433Direct
Homeodomain0.00001051Direct
BCR-homology GTPase activation domain (BH-domain)0.0001029Direct
DEP domain0.0003493Direct
Transforming growth factor (TGF)-beta0.0003493Direct
PDEase0.0009434Direct
Fibronectin type III0.002386Inherited
Laminin G-like module0.009239Inherited
I set domains0.01995Inherited
Frizzled cysteine-rich domain0.0253Inherited
FHA domain0.0253Inherited
Plexin repeat0.03617Inherited
PDZ domain0.03733Inherited
Tubulin, GTPase domain0.03943Inherited
Bromodomain0.0401Inherited
Tubulin, C-terminal domain0.06882Inherited
HMG-box0.08066Inherited
Clathrin coat assembly domain0.08331Inherited
Pleckstrin-homology domain (PH domain)0.2177Inherited
WD40-repeat1Inherited
C-type lectin domain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sema domain0.0000001619Direct
SMAD MH1 domain0.0000001619Direct
Arginase/deacetylase0.0000003182Direct
Transducin (alpha subunit), insertion domain0.0000008802Direct
GTPase activation domain, GAP0.000008858Direct
Homeodomain-like0.00001537Direct
Immunoglobulin0.00004684Direct
SMAD/FHA domain0.00004864Direct
PYP-like sensor domain (PAS domain)0.00114Inherited
Fibronectin type III0.002109Inherited
BAR/IMD domain-like0.003251Inherited
Concanavalin A-like lectins/glucanases0.008783Inherited
PX domain0.02471Inherited
Frizzled cysteine-rich domain0.02471Inherited
PDZ domain-like0.02925Inherited
Plexin repeat0.03482Inherited
Bet v1-like0.03482Inherited
Tubulin nucleotide-binding domain-like0.03686Inherited
Bromodomain0.0382Inherited
Tubulin C-terminal domain-like0.06466Inherited
Glutathione synthetase ATP-binding domain-like0.07101Inherited
HMG-box0.07701Inherited
TPR-like0.09285Inherited
EGF/Laminin0.1356Inherited
Cysteine-rich domain0.1716Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.1781Inherited
SNARE-like0.2287Inherited
PH domain-like0.2764Inherited
P-loop containing nucleoside triphosphate hydrolases0.2895Inherited
C-type lectin-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000008802Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.0002291Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.007609Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.008783Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.02471Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.03686Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.1021Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.3079Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.3761Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00003869Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.03457Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.08139Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)