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Worm Phenotype (WP): nervous system morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   morphology variant [WBPhenotype:0000520] <4>(443|535) (444|238|67)
+ 1:   organ system morphology variant [WBPhenotype:0000534] <8>(98|104) (99|46|16)
0:   nervous system morphology variant [WBPhenotype:0000604] <7>(32|28) (33|11|3)
- 1:   sensillum morphology variant [WBPhenotype:0000299] <7>(20|16) (21|7|0)
- 1:   neuron morphology variant [WBPhenotype:0000905] <4>(12|9) (13|4|2)
- 1:   synapse morphology variant [WBPhenotype:0000616] <2>(3|3) (3|2|1)
- 1:   accessory cell morphology variant [WBPhenotype:0000969] <1>(0|0) (0|0|0)
- 1:   neuron number variant [WBPhenotype:0001312](0|0) (0|0|0)
- 1:   neuron positioning variant [WBPhenotype:0001310](0|0) (0|0|0)
- 1:   synapse density variant [WBPhenotype:0002001](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0.0000001838Direct
SMAD MH1 domain0.0000001838Direct
Arginase/deacetylase0.0000003573Direct
Transducin (alpha subunit), insertion domain0.0000008065Direct
GTPase activation domain, GAP0.000008074Direct
Homeodomain-like0.00001212Direct
SMAD/FHA domain0.00004892Direct
Immunoglobulin0.0002283Direct
Fibronectin type III0.002067Inherited
Protein kinase-like (PK-like)0.002948Inherited
BAR/IMD domain-like0.003318Inherited
Concanavalin A-like lectins/glucanases0.008699Inherited
beta-beta-alpha zinc fingers0.0174Inherited
PX domain0.02643Inherited
Frizzled cysteine-rich domain0.02643Inherited
Plexin repeat0.03673Inherited
Bet v1-like0.03673Inherited
Tubulin nucleotide-binding domain-like0.03775Inherited
Bromodomain0.03988Inherited
PDZ domain-like0.05256Inherited
Tubulin C-terminal domain-like0.06604Inherited
Glutathione synthetase ATP-binding domain-like0.07318Inherited
HMG-box0.07997Inherited
EGF/Laminin0.1358Inherited
TPR-like0.1396Inherited
Cysteine-rich domain0.1755Inherited
SNARE-like0.2363Inherited
PH domain-like0.2666Inherited
P-loop containing nucleoside triphosphate hydrolases0.2671Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.2705Inherited
WD40 repeat-like0.9099Inherited
C-type lectin-like1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0Direct
SMAD domain0.0000002521Direct
Histone deacetylase, HDAC0.0000002521Direct
SMAD MH1 domain0.0000004493Direct
Transducin (alpha subunit), insertion domain0.0000008255Direct
Motor proteins0.000003321Direct
Homeodomain0.000007424Direct
BCR-homology GTPase activation domain (BH-domain)0.00008432Direct
Transforming growth factor (TGF)-beta0.0003297Direct
DEP domain0.0003297Direct
PDEase0.0008951Direct
Fibronectin type III0.002018Inherited
G proteins0.002233Inherited
Protein kinases, catalytic subunit0.003103Inherited
Laminin G-like module0.008539Inherited
Frizzled cysteine-rich domain0.02383Inherited
FHA domain0.02383Inherited
Plexin repeat0.03389Inherited
Tubulin, GTPase domain0.03611Inherited
Bromodomain0.03732Inherited
PDZ domain0.06347Inherited
Tubulin, C-terminal domain0.06347Inherited
I set domains0.06347Inherited
HMG-box0.07564Inherited
Clathrin coat assembly domain0.07945Inherited
Pleckstrin-homology domain (PH domain)0.2038Inherited
C-type lectin domain1Inherited
WD40-repeat1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SMAD MH1 domain0.0000001471Direct
Sema domain0.0000001471Direct
Arginase/deacetylase0.0000002865Direct
Transducin (alpha subunit), insertion domain0.000000649Direct
GTPase activation domain, GAP0.000006537Direct
Homeodomain-like0.000009822Direct
SMAD/FHA domain0.00003983Direct
Immunoglobulin0.0001868Direct
PYP-like sensor domain (PAS domain)0.0009923Direct
Fibronectin type III0.001729Inherited
Protein kinase-like (PK-like)0.002478Inherited
BAR/IMD domain-like0.002793Inherited
Concanavalin A-like lectins/glucanases0.007425Inherited
beta-beta-alpha zinc fingers0.01503Inherited
PX domain0.02304Inherited
Frizzled cysteine-rich domain0.02304Inherited
Bet v1-like0.03221Inherited
Plexin repeat0.03221Inherited
Tubulin nucleotide-binding domain-like0.03312Inherited
Bromodomain0.03504Inherited
PDZ domain-like0.04646Inherited
Tubulin C-terminal domain-like0.05872Inherited
Glutathione synthetase ATP-binding domain-like0.06521Inherited
HMG-box0.07146Inherited
EGF/Laminin0.1233Inherited
TPR-like0.1269Inherited
Cysteine-rich domain0.1606Inherited
SNARE-like0.2188Inherited
PH domain-like0.2478Inherited
P-loop containing nucleoside triphosphate hydrolases0.2482Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.2515Inherited
WD40 repeat-like0.8969Inherited
C-type lectin-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000000649Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.0002123Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.006671Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.023Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.02304Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.02553Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.03312Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.1383Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2923Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.3649Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00003609Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.03078Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.07628Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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