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Worm Phenotype (WP): reproductive system morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ 1:   organ system morphology variant [WBPhenotype:0000534] <8>(98|104) (100|47|16)
0:   reproductive system morphology variant [WBPhenotype:0000605] <5>(48|50) (51|17|6)
- 1:   gonad morphology variant [WBPhenotype:0001355] <10>(28|29) (29|9|2)
- 1:   hermaphrodite reproductive system morphology variant [WBPhenotype:0001335] <3>(23|22) (25|7|2)
- 1:   cloacal morphology variant [WBPhenotype:0000908] <2>(0|0) (0|0|0)
- 1:   connection of gonad variant [WBPhenotype:0000665](0|0) (0|0|0)
- 1:   male reproductive system morphology variant [WBPhenotype:0001306](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nop domain0Direct
14-3-3 protein0Direct
GroEL-intermediate domain like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL equatorial domain-like0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL apical domain-like0.000000001316Direct
Multidrug efflux transporter AcrB transmembrane domain0.000004469Direct
HMG-box0.0000106Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00007368Direct
Sm-like ribonucleoproteins0.0001753Direct
Retrovirus zinc finger-like domains0.0001753Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.000308Direct
RNA-binding domain, RBD0.0003581Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003916Direct
GINS helical bundle-like0.0004906Direct
RBP11-like subunits of RNA polymerase0.0004906Direct
"Winged helix" DNA-binding domain0.000615Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0008487Direct
Cullin homology domain0.0009228Direct
Zn-binding ribosomal proteins0.0009228Direct
S15/NS1 RNA-binding domain0.002058Inherited
Class II aaRS ABD-related0.002123Inherited
Translation proteins0.003011Inherited
Nucleic acid-binding proteins0.003277Inherited
L30e-like0.004123Inherited
Translational machinery components0.005251Inherited
TAZ domain0.005251Inherited
WD40 repeat-like0.008467Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.01145Inherited
Translation proteins SH3-like domain0.02834Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.02848Inherited
Histone-fold0.03668Inherited
ARM repeat0.04558Inherited
P-loop containing nucleoside triphosphate hydrolases0.0776Inherited
Activating enzymes of the ubiquitin-like proteins0.104Inherited
Prefoldin0.104Inherited
S-adenosylmethionine synthetase0.2406Inherited
Smc hinge domain0.2406Inherited
Subtilisin-like0.2406Inherited
Nucleotide-diphospho-sugar transferases0.4751Inherited
Cysteine-rich domain0.7772Inherited
Tubulin nucleotide-binding domain-like0.8557Inherited
beta-beta-alpha zinc fingers0.9075Inherited
Tubulin C-terminal domain-like0.9441Inherited
Protein kinase-like (PK-like)1Inherited
NAD(P)-binding Rossmann-fold domains1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
POU-specific domain0Direct
14-3-3 protein0Direct
Nop domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Integrin domains0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
RNA-polymerase beta0Direct
MIF4G domain-like0Direct
Proteasome subunits0.000000007942Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000000446Direct
Multidrug efflux transporter AcrB transmembrane domain0.000009769Direct
Laminin-type module0.00001616Direct
HMG-box0.00004218Direct
Ubiquitin activating enzymes (UBA)0.0001132Direct
Tandem AAA-ATPase domain0.0001186Direct
Canonical RBD0.0001626Direct
Nitrogenase iron protein-like0.0004Direct
Retrovirus zinc finger-like domains0.0005568Direct
RecA protein-like (ATPase-domain)0.0005688Direct
Glycosyl transferases group 10.0007735Direct
Anticodon-binding domain0.0007735Direct
Anticodon-binding domain of Class II aaRS0.0007735Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.001528Inherited
WD40-repeat0.00237Inherited
L30e/L7ae ribosomal proteins0.00323Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.003832Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.02476Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.04368Inherited
Elongation factors0.04846Inherited
Forkhead DNA-binding domain0.06021Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.06306Inherited
Actin/HSP700.06453Inherited
Nucleosome core histones0.07533Inherited
Translational machinery components0.09343Inherited
Prefoldin0.1446Inherited
Cold shock DNA-binding domain-like0.1658Inherited
Subtilases0.2223Inherited
Proprotein convertase P-domain0.2223Inherited
Smc hinge domain0.2223Inherited
Chromo domain0.2223Inherited
S-adenosylmethionine synthetase0.2223Inherited
Cyclin0.3788Inherited
Clathrin adaptor core protein0.4931Inherited
I set domains0.5353Inherited
Tubulin, GTPase domain0.8457Inherited
Tubulin, C-terminal domain0.9362Inherited
Protein kinases, catalytic subunit1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GroEL equatorial domain-like0Direct
14-3-3 protein0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL-intermediate domain like0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
Nop domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL apical domain-like0.000000001038Direct
Multidrug efflux transporter AcrB transmembrane domain0.000003604Direct
HMG-box0.00000856Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00005994Direct
Sm-like ribonucleoproteins0.0001431Direct
Retrovirus zinc finger-like domains0.0001431Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.0002524Direct
RNA-binding domain, RBD0.0002936Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003212Direct
RBP11-like subunits of RNA polymerase0.0004034Direct
GINS helical bundle-like0.0004034Direct
"Winged helix" DNA-binding domain0.0005059Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0007013Direct
Cullin homology domain0.0007629Direct
Zn-binding ribosomal proteins0.0007629Direct
S15/NS1 RNA-binding domain0.001716Inherited
Class II aaRS ABD-related0.001771Inherited
Translation proteins0.002526Inherited
Nucleic acid-binding proteins0.002755Inherited
L30e-like0.003475Inherited
Translational machinery components0.004437Inherited
TAZ domain0.004437Inherited
WD40 repeat-like0.007207Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.009799Inherited
Class II aaRS and biotin synthetases0.01578Inherited
Translation proteins SH3-like domain0.02474Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.02486Inherited
Histone-fold0.03216Inherited
ARM repeat0.04014Inherited
Chromo domain-like0.06047Inherited
P-loop containing nucleoside triphosphate hydrolases0.06932Inherited
Activating enzymes of the ubiquitin-like proteins0.09372Inherited
Prefoldin0.09372Inherited
Subtilisin-like0.2228Inherited
S-adenosylmethionine synthetase0.2228Inherited
Smc hinge domain0.2228Inherited
Nucleotide-diphospho-sugar transferases0.4533Inherited
Cysteine-rich domain0.7589Inherited
Growth factor receptor domain0.7589Inherited
Tubulin nucleotide-binding domain-like0.8399Inherited
beta-beta-alpha zinc fingers0.8939Inherited
Tubulin C-terminal domain-like0.9316Inherited
Protein kinase-like (PK-like)1Inherited
NAD(P)-binding Rossmann-fold domains1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.000123Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003212Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0004034Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.0004034Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.0007629Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.001716Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.008986Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.01696Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.02474Inherited
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.02486Inherited
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.2228Inherited
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.2228Inherited
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.2228Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.8399Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.000123Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003212Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.02486Inherited
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.2228Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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