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Worm Phenotype (WP): nervous system physiology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ 1:   organ system physiology variant [WBPhenotype:0000575] <8>(445|526) (445|228|63)
0:   nervous system physiology variant [WBPhenotype:0000612] <5>(8|9) (8|2|0)
- 1:   neuron physiology variant [WBPhenotype:0000991] <7>(2|3) (2|1|0)
- 1:   sensory system variant [WBPhenotype:0000652] <2>(2|2) (2|0|0)
- 1:   transmission of nerve impulse variant [WBPhenotype:0002020] <2>(4|3) (4|1|0)
- 1:   accessory cell physiology variant [WBPhenotype:0000974] <1>(0|0) (0|0|0)
- 1:   neuron degeneration variant [WBPhenotype:0000636] <1>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Clc chloride channel0.00000000001858Direct
CBS-domain pair0.0000001249Direct
P-loop containing nucleoside triphosphate hydrolases0.0000003141Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000007262Direct
Nicotinic receptor ligand binding domain-like0.00002073Direct
cAMP-binding domain-like0.00008107Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001443Direct
Transducin (alpha subunit), insertion domain0.0005051Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Clc chloride channel0.00000000005453Direct
G proteins0.0000001237Direct
CBS-domain pair0.0000002282Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00002331Direct
Nicotinic receptor ligand binding domain-like0.00004078Direct
Motor proteins0.00007383Direct
cAMP-binding domain0.0001082Direct
Transducin (alpha subunit), insertion domain0.0009126Direct
Homeodomain0.0009447Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Clc chloride channel0.00000000001473Direct
CBS-domain pair0.0000001005Direct
P-loop containing nucleoside triphosphate hydrolases0.0000002536Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000005923Direct
Nicotinic receptor ligand binding domain-like0.00001695Direct
cAMP-binding domain-like0.00006654Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001187Direct
Transducin (alpha subunit), insertion domain0.0004192Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.000005923Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0004192Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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