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Worm Phenotype (WP): alimentary system development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   development variant [WBPhenotype:0000518] <4>(506|581) (506|253|70)
+ 1:   organ system development variant [WBPhenotype:0000530] <9>(78|72) (81|32|12)
0:   alimentary system development variant [WBPhenotype:0000617] <6>(12|9) (13|5|3)
- 1:   pharyngeal development variant [WBPhenotype:0000707] <8>(4|3) (4|1|0)
- 1:   intestinal development variant [WBPhenotype:0000708] <4>(10|8) (11|5|3)
- 1:   anus development variant [WBPhenotype:0000094](0|0) (0|0|0)
- 1:   cloacal development variant [WBPhenotype:0000096](0|0) (0|0|0)
- 1:   pharyngeal intestinal valve development variant [WBPhenotype:0000098](0|0) (0|0|0)
- 1:   rectal development variant [WBPhenotype:0000347](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sm-like ribonucleoproteins0.0000001644Direct
Histone-fold0.0000017Direct
RNA-binding domain, RBD0.0006643Direct
ABC transporter transmembrane region0.001628Inherited
CCCH zinc finger0.01092Inherited
BAR/IMD domain-like0.04657Inherited
Nucleotide-diphospho-sugar transferases0.04712Inherited
SNARE-like0.08442Inherited
Bromodomain0.2502Inherited
WD40 repeat-like0.3813Inherited
FYVE/PHD zinc finger0.4949Inherited
Protein kinase-like (PK-like)0.603Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0.00000008049Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000003184Direct
Canonical RBD0.0004993Direct
ABC transporter transmembrane region0.00207Inherited
Clathrin coat assembly domain0.004842Inherited
CCCH zinc finger0.01019Inherited
ABC transporter ATPase domain-like0.01814Inherited
WD40-repeat0.2618Inherited
Protein kinases, catalytic subunit0.7271Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sm-like ribonucleoproteins0.0000001312Direct
Histone-fold0.00000137Direct
RNA-binding domain, RBD0.0005482Direct
ABC transporter transmembrane region0.001355Inherited
CCCH zinc finger0.009346Inherited
BAR/IMD domain-like0.04101Inherited
Nucleotide-diphospho-sugar transferases0.04151Inherited
SNARE-like0.07548Inherited
Bromodomain0.2319Inherited
WD40 repeat-like0.3597Inherited
FYVE/PHD zinc finger0.4721Inherited
PH domain-like0.4841Inherited
Protein kinase-like (PK-like)0.5806Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.0001675Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.001073Inherited
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001355Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.1199Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.1728Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0001675Direct
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.0001675Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1199Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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