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Worm Phenotype (WP): alimentary system development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   development variant [WBPhenotype:0000518] <4>(511|586) (511|253|70)
+ 1:   organ system development variant [WBPhenotype:0000530] <9>(80|72) (81|31|12)
0:   alimentary system development variant [WBPhenotype:0000617] <6>(12|10) (13|5|3)
- 1:   pharyngeal development variant [WBPhenotype:0000707] <8>(4|3) (4|1|0)
- 1:   intestinal development variant [WBPhenotype:0000708] <4>(10|9) (11|5|3)
- 1:   anus development variant [WBPhenotype:0000094](0|0) (0|0|0)
- 1:   cloacal development variant [WBPhenotype:0000096](0|0) (0|0|0)
- 1:   pharyngeal intestinal valve development variant [WBPhenotype:0000098](0|0) (0|0|0)
- 1:   rectal development variant [WBPhenotype:0000347](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sm-like ribonucleoproteins0.0000001536Direct
Histone-fold0.000001561Direct
RNA-binding domain, RBD0.0004151Direct
ABC transporter transmembrane region0.001468Inherited
CCCH zinc finger0.01058Inherited
Nucleotide-diphospho-sugar transferases0.04388Inherited
SNARE-like0.08258Inherited
BAR/IMD domain-like0.08258Inherited
Bromodomain0.2457Inherited
WD40 repeat-like0.3391Inherited
FYVE/PHD zinc finger0.4869Inherited
Protein kinase-like (PK-like)0.645Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0.00000005896Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000003037Direct
Canonical RBD0.0003049Direct
ABC transporter transmembrane region0.001833Inherited
Clathrin coat assembly domain0.004737Inherited
CCCH zinc finger0.009891Inherited
ABC transporter ATPase domain-like0.0161Inherited
WD40-repeat0.2228Inherited
Bromodomain0.2388Inherited
Protein kinases, catalytic subunit0.7733Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sm-like ribonucleoproteins0.0000001225Direct
Histone-fold0.000001257Direct
RNA-binding domain, RBD0.0003409Direct
ABC transporter transmembrane region0.00122Inherited
CCCH zinc finger0.009046Inherited
Nucleotide-diphospho-sugar transferases0.03858Inherited
BAR/IMD domain-like0.07387Inherited
SNARE-like0.07387Inherited
Bromodomain0.2277Inherited
WD40 repeat-like0.3184Inherited
FYVE/PHD zinc finger0.4646Inherited
PH domain-like0.4741Inherited
Protein kinase-like (PK-like)0.6231Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.0001549Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.00104Inherited
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00122Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.1177Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.1697Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0001549Direct
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.0001549Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1177Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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