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Worm Phenotype (WP): positive chemotaxis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|57)
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|69)
+ + + + + 5:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + + + + 5:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|56)
+ + + + 4:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ + + + 4:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(137|128) (138|57|18)
+ + + 3:   chemosensory behavior variant [WBPhenotype:0001049] <3>(20|19) (20|5|0)
+ + + 3:   chemical response variant [WBPhenotype:0000523] <17>(79|73) (80|30|9)
+ + 2:   chemosensory response variant [WBPhenotype:0001040] <3>(20|19) (20|5|0)
+ 1:   chemotaxis variant [WBPhenotype:0001434] <2>(20|18) (20|5|0)
0:   positive chemotaxis variant [WBPhenotype:0000635] <3>(12|12) (12|4|0)
- 1:   aqueous positive chemotaxis variant [WBPhenotype:0001047] <8>(8|8) (8|3|0)
- 1:   odorant positive chemotaxis variant [WBPhenotype:0000265] <8>(7|7) (7|2|0)
- 1:   positive chemotaxis defective [WBPhenotype:0000015] <4>(8|6) (8|3|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleotide cyclase0Direct
Neurotransmitter-gated ion-channel transmembrane pore0Direct
Nicotinic receptor ligand binding domain-like0Direct
cAMP-binding domain-like0.000000196Direct
Protein kinase-like (PK-like)0.00007402Direct
Cysteine-rich domain0.0005747Direct
Periplasmic binding protein-like I0.001775Inherited
TPR-like0.08755Inherited
Periplasmic binding protein-like II0.2393Inherited
Multidrug efflux transporter AcrB transmembrane domain0.2393Inherited
HLH, helix-loop-helix DNA-binding domain0.3309Inherited
Voltage-gated potassium channels0.335Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Neurotransmitter-gated ion-channel transmembrane pore0Direct
Nicotinic receptor ligand binding domain-like0Direct
Adenylyl and guanylyl cyclase catalytic domain0Direct
cAMP-binding domain0.0000003597Direct
PLC-like (P variant)0.0001374Direct
Protein kinases, catalytic subunit0.0001818Direct
Pleckstrin-homology domain (PH domain)0.00196Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.002269Inherited
L-arabinose binding protein-like0.0125Inherited
Multidrug efflux transporter AcrB transmembrane domain0.2443Inherited
Phosphate binding protein-like0.2443Inherited
HLH, helix-loop-helix DNA-binding domain0.3347Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleotide cyclase0Direct
Neurotransmitter-gated ion-channel transmembrane pore0Direct
Nicotinic receptor ligand binding domain-like0Direct
cAMP-binding domain-like0.0000001573Direct
Protein kinase-like (PK-like)0.00006054Direct
Cysteine-rich domain0.0004758Direct
Periplasmic binding protein-like I0.001485Inherited
TPR-like0.07871Inherited
Multidrug efflux transporter AcrB transmembrane domain0.2218Inherited
Periplasmic binding protein-like II0.2218Inherited
HLH, helix-loop-helix DNA-binding domain0.3112Inherited
Voltage-gated potassium channels0.3153Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0Direct
    56112,55073
  • 56112 - Protein kinase-like (PK-like)
  • 55073 - Nucleotide cyclase
  • 0Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.0001197Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.3112Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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