SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): osmotic avoidance variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + 9:   Variant [WBPhenotype:0000886] <2>
+ + + + + + + 7:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + + + 7:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + + + + 6:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + + + + + 6:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + + + + 5:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ + + + + 5:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ + + + 4:   chemical response variant [WBPhenotype:0000523] <17>(80|73) (81|30|9)
+ + + + 4:   chemosensory behavior variant [WBPhenotype:0001049] <3>(20|19) (20|5|0)
+ + + 3:   chemosensory response variant [WBPhenotype:0001040] <3>(20|19) (20|5|0)
+ + 2:   chemotaxis variant [WBPhenotype:0001434] <2>(20|18) (20|5|0)
+ 1:   negative chemotaxis variant [WBPhenotype:0000481] <3>(8|6) (8|1|0)
0:   osmotic avoidance variant [WBPhenotype:0000663] <2>(3|2) (3|1|0)
- 1:   high sodium chloride concentration osmotic avoidance variant [WBPhenotype:0001453] <1>(0|0) (0|0|0)
- 1:   osmotic avoidance defective [WBPhenotype:0000249] <1>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Glutathione synthetase ATP-binding domain-like0.00000001899Direct
WD40 repeat-like0.0001862Direct
Nucleotide cyclase0.000329Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
WD40-repeat0.0003044Direct
Adenylyl and guanylyl cyclase catalytic domain0.0003525Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Glutathione synthetase ATP-binding domain-like0.00000001516Direct
WD40 repeat-like0.0001529Direct
Nucleotide cyclase0.0002711Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.000003379Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)